RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 NCOA1Q15788 1441 aa9.34□□□□□ -0.91
CELF1-220ENST00000539455 RNF216Q9NWF9 866 aaPredicted RBP9.34□□□□□ -0.91
CELF1-220ENST00000539455 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
CELF1-220ENST00000539455 IQGAP2Q13576 1575 aa9.33□□□□□ -0.92
CELF1-220ENST00000539455 FER1L4A9Z1Z3 1794 aa9.32□□□□□ -0.92
CELF1-220ENST00000539455 ARHGEF12Q9NZN5 1544 aa9.31□□□□□ -0.92
CELF1-220ENST00000539455 SLC4A1APQ9BWU0 796 aaKnown RBP9.31□□□□□ -0.92
CELF1-220ENST00000539455 TOM1O60784 492 aa9.29□□□□□ -0.92
CELF1-220ENST00000539455 FHOD3Q2V2M9 1422 aa9.29□□□□□ -0.92
CELF1-220ENST00000539455 DENND4BO75064 1496 aaPredicted RBP9.28□□□□□ -0.92
CELF1-220ENST00000539455 ARID3CA6NKF2 412 aa9.28□□□□□ -0.92
CELF1-220ENST00000539455 NCKAP5LQ9HCH0 1330 aa9.28□□□□□ -0.92
CELF1-220ENST00000539455 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.92
CELF1-220ENST00000539455 ZFYVE16Q7Z3T8 1539 aa9.27□□□□□ -0.93
CELF1-220ENST00000539455 HOXD11P31277 338 aaPredicted RBP9.27□□□□□ -0.93
CELF1-220ENST00000539455 KIAA0556O60303 1618 aa9.27□□□□□ -0.93
CELF1-220ENST00000539455 UGGT2Q9NYU1 1516 aa9.26□□□□□ -0.93
CELF1-220ENST00000539455 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
CELF1-220ENST00000539455 ZMYM4Q5VZL5 1548 aa9.25□□□□□ -0.93
CELF1-220ENST00000539455 CARMIL1Q5VZK9 1371 aa9.24□□□□□ -0.93
CELF1-220ENST00000539455 ABCA8O94911 1581 aa9.24□□□□□ -0.93
CELF1-220ENST00000539455 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.938e-10■■■□□ 17.6
CELF1-220ENST00000539455 RICTORQ6R327 1708 aa9.23□□□□□ -0.93
CELF1-220ENST00000539455 CAMSAP1Q5T5Y3 1602 aa9.23□□□□□ -0.93
CELF1-220ENST00000539455 MAGI2Q86UL8 1455 aa9.22□□□□□ -0.93
CELF1-220ENST00000539455 TRAPPC8Q9Y2L5 1435 aa9.22□□□□□ -0.93
CELF1-220ENST00000539455 ALKQ9UM73 1620 aa9.21□□□□□ -0.93
CELF1-220ENST00000539455 C9orf84Q5VXU9 1444 aa9.19□□□□□ -0.94
CELF1-220ENST00000539455 KIF27Q86VH2 1401 aa9.19□□□□□ -0.94
CELF1-220ENST00000539455 ATP10BO94823 1461 aa9.19□□□□□ -0.94
CELF1-220ENST00000539455 ATP10AO60312 1499 aa9.18□□□□□ -0.94
CELF1-220ENST00000539455 PKD2Q13563 968 aa9.18□□□□□ -0.94
CELF1-220ENST00000539455 PTPRKQ15262 1439 aa9.18□□□□□ -0.94
CELF1-220ENST00000539455 HECW1Q76N89 1606 aa9.18□□□□□ -0.94
CELF1-220ENST00000539455 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
CELF1-220ENST00000539455 SETD1BQ9UPS6 1966 aaKnown RBP9.16□□□□□ -0.94
CELF1-220ENST00000539455 CPS1P31327 1500 aa9.15□□□□□ -0.94
CELF1-220ENST00000539455 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
CELF1-220ENST00000539455 PLA2R1Q13018 1463 aa9.15□□□□□ -0.95
CELF1-220ENST00000539455 C3P01024 1663 aa9.14□□□□□ -0.95
CELF1-220ENST00000539455 IFFO2Q5TF58 517 aa9.13□□□□□ -0.95
CELF1-220ENST00000539455 RAPGEF2Q9Y4G8 1499 aa9.13□□□□□ -0.95
CELF1-220ENST00000539455 SHANK2Q9UPX8 1470 aa9.12□□□□□ -0.95
CELF1-220ENST00000539455 TRIM52Q96A61 297 aa9.11□□□□□ -0.95
CELF1-220ENST00000539455 NPATQ14207 1427 aa9.1□□□□□ -0.95
CELF1-220ENST00000539455 SCAPERQ9BY12 1400 aa9.1□□□□□ -0.95
CELF1-220ENST00000539455 GOLGA3Q08378 1498 aa9.09□□□□□ -0.95
CELF1-220ENST00000539455 CFAP74Q9C0B2 1584 aa9.09□□□□□ -0.95
CELF1-220ENST00000539455 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
CELF1-220ENST00000539455 SETBP1Q9Y6X0 1596 aa9.07□□□□□ -0.96
CELF1-220ENST00000539455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.06□□□□□ -0.96
CELF1-220ENST00000539455 HNRNPUL2Q1KMD3 747 aaKnown RBP9.06□□□□□ -0.96
CELF1-220ENST00000539455 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
CELF1-220ENST00000539455 AGLP35573 1532 aa9.05□□□□□ -0.96
CELF1-220ENST00000539455 VWDEQ8N2E2 1590 aa9.03□□□□□ -0.96
CELF1-220ENST00000539455 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
CELF1-220ENST00000539455 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
CELF1-220ENST00000539455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.03□□□□□ -0.96
CELF1-220ENST00000539455 LRRC7Q96NW7 1537 aa9.03□□□□□ -0.96
CELF1-220ENST00000539455 ZNF142P52746 1687 aaPredicted RBP9.03□□□□□ -0.96
CELF1-220ENST00000539455 REREQ9P2R6 1566 aa9.02□□□□□ -0.97
CELF1-220ENST00000539455 ZMYM3Q14202 1370 aa9.01□□□□□ -0.97
CELF1-220ENST00000539455 NEURL4Q96JN8 1562 aa9.01□□□□□ -0.97
CELF1-220ENST00000539455 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
CELF1-220ENST00000539455 MYO3AQ8NEV4 1616 aa9.01□□□□□ -0.97
CELF1-220ENST00000539455 ZRANB1Q9UGI0 708 aa9□□□□□ -0.97
CELF1-220ENST00000539455 RNF17Q9BXT8 1623 aaKnown RBP9□□□□□ -0.97
CELF1-220ENST00000539455 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
CELF1-220ENST00000539455 CSRNP3Q8WYN3 585 aa8.99□□□□□ -0.97
CELF1-220ENST00000539455 ZNF518AQ6AHZ1 1483 aa8.98□□□□□ -0.97
CELF1-220ENST00000539455 PLEKHD1A6NEE1 506 aa8.98□□□□□ -0.97
CELF1-220ENST00000539455 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
CELF1-220ENST00000539455 AFAP1Q8N556 730 aa8.98□□□□□ -0.97
CELF1-220ENST00000539455 MYT1LQ9UL68 1186 aa8.98□□□□□ -0.97
CELF1-220ENST00000539455 PLCH2O75038 1416 aa8.97□□□□□ -0.97
CELF1-220ENST00000539455 FAM135BQ49AJ0 1406 aa8.97□□□□□ -0.97
CELF1-220ENST00000539455 SUPT6HQ7KZ85 1726 aaKnown RBP8.97□□□□□ -0.97
CELF1-220ENST00000539455 NUP153P49790 1475 aaKnown RBP8.97□□□□□ -0.97
CELF1-220ENST00000539455 DCAF8L1A6NGE4 600 aa8.97□□□□□ -0.97
CELF1-220ENST00000539455 KDM5CP41229 1560 aa8.97□□□□□ -0.97
CELF1-220ENST00000539455 FOXD4L1Q9NU39 408 aa8.96□□□□□ -0.98
CELF1-220ENST00000539455 A2ML1A8K2U0 1454 aa8.96□□□□□ -0.98
CELF1-220ENST00000539455 ABCA6Q8N139 1617 aa8.95□□□□□ -0.98
CELF1-220ENST00000539455 RAPGEF6Q8TEU7 1601 aa8.95□□□□□ -0.98
CELF1-220ENST00000539455 RXRBP28702 533 aa8.95□□□□□ -0.98
CELF1-220ENST00000539455 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
CELF1-220ENST00000539455 CDK12Q9NYV4 1490 aaPredicted RBP8.95□□□□□ -0.98
CELF1-220ENST00000539455 MROH2AA6NES4 1674 aa8.94□□□□□ -0.98
CELF1-220ENST00000539455 STRCP1A6NGW2 1772 aa8.94□□□□□ -0.98
CELF1-220ENST00000539455 ZBTB22O15209 634 aa8.94□□□□□ -0.98
CELF1-220ENST00000539455 DNMT1P26358 1616 aaKnown RBP8.94□□□□□ -0.98
CELF1-220ENST00000539455 EFCAB2Q5VUJ9 269 aa8.93□□□□□ -0.98
CELF1-220ENST00000539455 NPHP4O75161 1426 aaPredicted RBP8.93□□□□□ -0.98
CELF1-220ENST00000539455 SYNMO15061 1565 aa8.92□□□□□ -0.98
CELF1-220ENST00000539455 MLH3Q9UHC1 1453 aa8.92□□□□□ -0.98
CELF1-220ENST00000539455 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
CELF1-220ENST00000539455 LRP6O75581 1613 aa8.91□□□□□ -0.98
CELF1-220ENST00000539455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.91□□□□□ -0.98
CELF1-220ENST00000539455 JCADQ9P266 1359 aa8.91□□□□□ -0.98
CELF1-220ENST00000539455 SLC4A2P04920 1241 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms