RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	RUSC2	Q8N2Y8	1516 aa		13.7	□□□□□ -0.22
POLE-210	ENST00000537064	PDE4A	P27815	886 aa		13.7	□□□□□ -0.22
POLE-210	ENST00000537064	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.7	□□□□□ -0.22
POLE-210	ENST00000537064	CNTLN	Q9NXG0	1405 aa		13.69	□□□□□ -0.22
POLE-210	ENST00000537064	TMF1	P82094	1093 aa		13.69	□□□□□ -0.22
POLE-210	ENST00000537064	HSP90AB1	P08238	724 aa	Known RBP	13.69	□□□□□ -0.22
POLE-210	ENST00000537064	NLRP13	Q86W25	1043 aa		13.68	□□□□□ -0.22
POLE-210	ENST00000537064	FBLN2	P98095	1184 aa		13.68	□□□□□ -0.22
POLE-210	ENST00000537064	UACA	Q9BZF9	1416 aa		13.68	□□□□□ -0.22
POLE-210	ENST00000537064	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-210	ENST00000537064	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.68	□□□□□ -0.22
POLE-210	ENST00000537064	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-210	ENST00000537064	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-210	ENST00000537064	MPHOSPH9	Q99550	1183 aa		13.67	□□□□□ -0.22
POLE-210	ENST00000537064	FAM161A	Q3B820	660 aa		13.67	□□□□□ -0.22
POLE-210	ENST00000537064	ESF1	Q9H501	851 aa	Known RBP	13.67	□□□□□ -0.22
POLE-210	ENST00000537064	CHAF1A	Q13111	956 aa	Predicted RBP	13.67	□□□□□ -0.22
POLE-210	ENST00000537064	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.66	□□□□□ -0.22
POLE-210	ENST00000537064	MAPK8IP3	Q9UPT6	1336 aa		13.66	□□□□□ -0.22
POLE-210	ENST00000537064	PMFBP1	Q8TBY8	1022 aa		13.66	□□□□□ -0.22
POLE-210	ENST00000537064	RRP1	P56182	461 aa	Known RBP	13.65	□□□□□ -0.22
POLE-210	ENST00000537064	DDX11L8	A8MPP1	907 aa		13.65	□□□□□ -0.22
POLE-210	ENST00000537064	TPRN	Q4KMQ1	711 aa		13.63	□□□□□ -0.23
POLE-210	ENST00000537064	LRRC9	Q6ZRR7	1453 aa		13.63	□□□□□ -0.23
POLE-210	ENST00000537064	RWDD1	Q9H446	243 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-210	ENST00000537064	PLEKHD1	A6NEE1	506 aa		13.61	□□□□□ -0.23
POLE-210	ENST00000537064	NGEF	Q8N5V2	710 aa		13.61	□□□□□ -0.23
POLE-210	ENST00000537064	EIF3A	Q14152	1382 aa	Known RBP	13.6	□□□□□ -0.23
POLE-210	ENST00000537064	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-210	ENST00000537064	SENP3	Q9H4L4	574 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-210	ENST00000537064	L3MBTL2	Q969R5	705 aa		13.6	□□□□□ -0.23
POLE-210	ENST00000537064	AAMP	Q13685	434 aa		13.59	□□□□□ -0.23
POLE-210	ENST00000537064	CCDC7	Q96M83	1385 aa		13.58	□□□□□ -0.23
POLE-210	ENST00000537064	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	6e-7	■■■□□ 16.7
POLE-210	ENST00000537064	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	5e-7	■■■□□ 17.6
POLE-210	ENST00000537064	FAM43A	Q8N2R8	423 aa		13.57	□□□□□ -0.24
POLE-210	ENST00000537064	SMG6	Q86US8	1419 aa	Known RBP	13.57	□□□□□ -0.24
POLE-210	ENST00000537064	GOLGA2	Q08379	1002 aa		13.57	□□□□□ -0.24
POLE-210	ENST00000537064	STAG3	Q9UJ98	1225 aa		13.57	□□□□□ -0.24
POLE-210	ENST00000537064	CC2D1B	Q5T0F9	858 aa	Known RBP	13.56	□□□□□ -0.24
POLE-210	ENST00000537064	CHGA	P10645	457 aa	Known RBP	13.56	□□□□□ -0.24
POLE-210	ENST00000537064	SYAP1	Q96A49	352 aa	Predicted RBP	13.56	□□□□□ -0.24
POLE-210	ENST00000537064	MAP3K1	Q13233	1512 aa		13.56	□□□□□ -0.24
POLE-210	ENST00000537064	TAOK2	Q9UL54	1235 aa		13.56	□□□□□ -0.24
POLE-210	ENST00000537064	ANKRD30A	Q9BXX3	1397 aa		13.56	□□□□□ -0.24
POLE-210	ENST00000537064	FGD6	Q6ZV73	1430 aa		13.56	□□□□□ -0.24
POLE-210	ENST00000537064	GOLGA6L6	A8MZA4	724 aa		13.56	□□□□□ -0.24
POLE-210	ENST00000537064	FYCO1	Q9BQS8	1478 aa		13.56	□□□□□ -0.24
POLE-210	ENST00000537064	WDR97	A6NE52	1622 aa		13.55	□□□□□ -0.24
POLE-210	ENST00000537064	TOP2B	Q02880	1626 aa		13.55	□□□□□ -0.24
POLE-210	ENST00000537064	TIAM1	Q13009	1591 aa		13.55	□□□□□ -0.24
POLE-210	ENST00000537064	DCAF11	Q8TEB1	546 aa		13.55	□□□□□ -0.24
POLE-210	ENST00000537064	FRAT1	Q92837	279 aa	Predicted RBP	13.55	□□□□□ -0.24
POLE-210	ENST00000537064	KIAA2012	Q0VF49	1180 aa		13.54	□□□□□ -0.24
POLE-210	ENST00000537064	ZBTB7C	A1YPR0	619 aa		13.54	□□□□□ -0.24
POLE-210	ENST00000537064	IPO8	O15397	1037 aa	Known RBP	13.54	□□□□□ -0.24
POLE-210	ENST00000537064	BRD4	O60885	1362 aa	Predicted RBP	13.54	□□□□□ -0.24
POLE-210	ENST00000537064	SYNJ1	O43426	1573 aa		13.53	□□□□□ -0.24
POLE-210	ENST00000537064	CGNL1	Q0VF96	1302 aa		13.53	□□□□□ -0.24
POLE-210	ENST00000537064	ARAP1	Q96P48	1450 aa		13.53	□□□□□ -0.24
POLE-210	ENST00000537064	ATAD2B	Q9ULI0	1458 aa		13.53	□□□□□ -0.24
POLE-210	ENST00000537064	PRKCSH	P14314	528 aa	Predicted RBP	13.53	□□□□□ -0.24
POLE-210	ENST00000537064	EFCAB5	A4FU69	1503 aa		13.53	□□□□□ -0.24
POLE-210	ENST00000537064	MTERF4	Q7Z6M4	381 aa	Known RBP	13.53	□□□□□ -0.24
POLE-210	ENST00000537064	USP47	Q96K76	1375 aa		13.52	□□□□□ -0.24
POLE-210	ENST00000537064	NRDC	O43847	1150 aa		13.52	□□□□□ -0.24
POLE-210	ENST00000537064	HAP1	P54257	671 aa	Predicted RBP	13.52	□□□□□ -0.24
POLE-210	ENST00000537064	MAP7D2	Q96T17	732 aa		13.52	□□□□□ -0.24
POLE-210	ENST00000537064	SLK	Q9H2G2	1235 aa	Predicted RBP	13.52	□□□□□ -0.24
POLE-210	ENST00000537064	EIF4G1	Q04637	1599 aa	Known RBP	13.52	□□□□□ -0.24
POLE-210	ENST00000537064	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-210	ENST00000537064	MIA2	Q96PC5	1412 aa		13.52	□□□□□ -0.25
POLE-210	ENST00000537064	ISY1	Q9ULR0	285 aa	Known RBP	13.52	□□□□□ -0.25
POLE-210	ENST00000537064	NFKBIB	Q15653	356 aa		13.51	□□□□□ -0.25
POLE-210	ENST00000537064	MYOM3	Q5VTT5	1437 aa		13.51	□□□□□ -0.25
POLE-210	ENST00000537064	MCC	P23508	829 aa		13.5	□□□□□ -0.25
POLE-210	ENST00000537064	PKD2	Q13563	968 aa		13.5	□□□□□ -0.25
POLE-210	ENST00000537064	FHOD3	Q2V2M9	1422 aa		13.5	□□□□□ -0.25
POLE-210	ENST00000537064	RGL3	Q3MIN7	710 aa		13.5	□□□□□ -0.25
POLE-210	ENST00000537064	CASKIN1	Q8WXD9	1431 aa		13.49	□□□□□ -0.25
POLE-210	ENST00000537064	PHF14	O94880	888 aa		13.49	□□□□□ -0.25
POLE-210	ENST00000537064	EXOC6	Q8TAG9	804 aa		13.48	□□□□□ -0.25
POLE-210	ENST00000537064	PRX	Q9BXM0	1461 aa		13.48	□□□□□ -0.25
POLE-210	ENST00000537064	NPM1	P06748	294 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
POLE-210	ENST00000537064	ZRSR1	Q15695	479 aa	Known RBP	13.47	□□□□□ -0.25
POLE-210	ENST00000537064	VSIG10	Q8N0Z9	540 aa		13.47	□□□□□ -0.25
POLE-210	ENST00000537064	WASHC2A	Q641Q2	1341 aa		13.47	□□□□□ -0.25
POLE-210	ENST00000537064	CSPP1	Q1MSJ5	1256 aa		13.47	□□□□□ -0.25
POLE-210	ENST00000537064	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-210	ENST00000537064	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-210	ENST00000537064	GZF1	Q9H116	711 aa	Predicted RBP	13.46	□□□□□ -0.25
POLE-210	ENST00000537064	HFM1	A2PYH4	1435 aa		13.46	□□□□□ -0.25
POLE-210	ENST00000537064	TPM2	P07951	284 aa		13.46	□□□□□ -0.25
POLE-210	ENST00000537064	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.46	□□□□□ -0.26
POLE-210	ENST00000537064	CALD1	Q05682	793 aa	Known RBP	13.45	□□□□□ -0.26
POLE-210	ENST00000537064	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-210	ENST00000537064		E9PSI1	815 aa		13.45	□□□□□ -0.26
POLE-210	ENST00000537064	MSH5	O43196	834 aa		13.45	□□□□□ -0.26
POLE-210	ENST00000537064	MRE11	P49959	708 aa		13.44	□□□□□ -0.26
POLE-210	ENST00000537064	WASHC2C	Q9Y4E1	1318 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms