RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 RAPGEF6Q8TEU7 1601 aa13.36□□□□□ -0.27
LINC00958-207ENST00000534477 FHOD3Q2V2M9 1422 aa13.36□□□□□ -0.27
LINC00958-207ENST00000534477 SAMD9Q5K651 1589 aa13.36□□□□□ -0.27
LINC00958-207ENST00000534477 KIF21BO75037 1637 aa13.35□□□□□ -0.27
LINC00958-207ENST00000534477 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
LINC00958-207ENST00000534477 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
LINC00958-207ENST00000534477 EEA1Q15075 1411 aa13.3□□□□□ -0.28
LINC00958-207ENST00000534477 RAPGEF3O95398 923 aa13.3□□□□□ -0.28
LINC00958-207ENST00000534477 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
LINC00958-207ENST00000534477 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
LINC00958-207ENST00000534477 ARID4BQ4LE39 1312 aaPredicted RBP13.29□□□□□ -0.28
LINC00958-207ENST00000534477 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
LINC00958-207ENST00000534477 ARAP3Q8WWN8 1544 aa13.28□□□□□ -0.28
LINC00958-207ENST00000534477 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
LINC00958-207ENST00000534477 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
LINC00958-207ENST00000534477 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
LINC00958-207ENST00000534477 NEO1Q92859 1461 aa13.23□□□□□ -0.29
LINC00958-207ENST00000534477 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
LINC00958-207ENST00000534477 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
LINC00958-207ENST00000534477 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
LINC00958-207ENST00000534477 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
LINC00958-207ENST00000534477 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
LINC00958-207ENST00000534477 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
LINC00958-207ENST00000534477 FANCAO15360 1455 aa13.19□□□□□ -0.3
LINC00958-207ENST00000534477 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
LINC00958-207ENST00000534477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00958-207ENST00000534477 AKNAQ7Z591 1439 aa13.18□□□□□ -0.3
LINC00958-207ENST00000534477 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
LINC00958-207ENST00000534477 PTPRMP28827 1452 aa13.17□□□□□ -0.3
LINC00958-207ENST00000534477 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
LINC00958-207ENST00000534477 MLECQ14165 292 aa13.17□□□□□ -0.3
LINC00958-207ENST00000534477 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
LINC00958-207ENST00000534477 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
LINC00958-207ENST00000534477 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
LINC00958-207ENST00000534477 ARHGEF40Q8TER5 1519 aa13.15□□□□□ -0.3
LINC00958-207ENST00000534477 PROM2Q8N271 834 aa13.15□□□□□ -0.3
LINC00958-207ENST00000534477 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
LINC00958-207ENST00000534477 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.31
LINC00958-207ENST00000534477 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
LINC00958-207ENST00000534477 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
LINC00958-207ENST00000534477 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
LINC00958-207ENST00000534477 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
LINC00958-207ENST00000534477 ZFYVE16Q7Z3T8 1539 aa13.12□□□□□ -0.31
LINC00958-207ENST00000534477 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
LINC00958-207ENST00000534477 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
LINC00958-207ENST00000534477 SCAPERQ9BY12 1400 aa13.11□□□□□ -0.31
LINC00958-207ENST00000534477 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
LINC00958-207ENST00000534477 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
LINC00958-207ENST00000534477 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
LINC00958-207ENST00000534477 KIF14Q15058 1648 aa13.09□□□□□ -0.31
LINC00958-207ENST00000534477 PLCH2O75038 1416 aa13.08□□□□□ -0.32
LINC00958-207ENST00000534477 ARHGAP5Q13017 1502 aa13.08□□□□□ -0.32
LINC00958-207ENST00000534477 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
LINC00958-207ENST00000534477 HSPA2P54652 639 aa13.07□□□□□ -0.32
LINC00958-207ENST00000534477 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
LINC00958-207ENST00000534477 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
LINC00958-207ENST00000534477 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
LINC00958-207ENST00000534477 CLIP1P30622 1438 aa13.06□□□□□ -0.32
LINC00958-207ENST00000534477 LRRIQ1Q96JM4 1722 aa13.05□□□□□ -0.32
LINC00958-207ENST00000534477 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
LINC00958-207ENST00000534477 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
LINC00958-207ENST00000534477 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
LINC00958-207ENST00000534477 MAGI2Q86UL8 1455 aa13.03□□□□□ -0.32
LINC00958-207ENST00000534477 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
LINC00958-207ENST00000534477 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
LINC00958-207ENST00000534477 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
LINC00958-207ENST00000534477 AFAP1Q8N556 730 aa13.02□□□□□ -0.33
LINC00958-207ENST00000534477 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
LINC00958-207ENST00000534477 ATP10AO60312 1499 aa13.01□□□□□ -0.33
LINC00958-207ENST00000534477 CEBPAP49715 358 aaPredicted RBP13□□□□□ -0.33
LINC00958-207ENST00000534477 FBXO41Q8TF61 875 aa13□□□□□ -0.33
LINC00958-207ENST00000534477 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
LINC00958-207ENST00000534477 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
LINC00958-207ENST00000534477 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
LINC00958-207ENST00000534477 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
LINC00958-207ENST00000534477 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
LINC00958-207ENST00000534477 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
LINC00958-207ENST00000534477 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
LINC00958-207ENST00000534477 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
LINC00958-207ENST00000534477 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
LINC00958-207ENST00000534477 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
LINC00958-207ENST00000534477 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
LINC00958-207ENST00000534477 KDM5CP41229 1560 aa12.94□□□□□ -0.34
LINC00958-207ENST00000534477 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
LINC00958-207ENST00000534477 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
LINC00958-207ENST00000534477 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
LINC00958-207ENST00000534477 ABCC1P33527 1531 aa12.93□□□□□ -0.34
LINC00958-207ENST00000534477 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
LINC00958-207ENST00000534477 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
LINC00958-207ENST00000534477 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
LINC00958-207ENST00000534477 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
LINC00958-207ENST00000534477 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00958-207ENST00000534477 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
LINC00958-207ENST00000534477 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
LINC00958-207ENST00000534477 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
LINC00958-207ENST00000534477 SAMD9LQ8IVG5 1584 aa12.87□□□□□ -0.35
LINC00958-207ENST00000534477 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
LINC00958-207ENST00000534477 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
LINC00958-207ENST00000534477 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
LINC00958-207ENST00000534477 C3P01024 1663 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms