RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 FGD6Q6ZV73 1430 aa27.01■■□□□ 1.92
CTSB-222ENST00000531551 PREX2Q70Z35 1606 aa27.01■■□□□ 1.91
CTSB-222ENST00000531551 FAM50AQ14320 339 aaKnown RBP27■■□□□ 1.91
CTSB-222ENST00000531551 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
CTSB-222ENST00000531551 FANCAO15360 1455 aa26.99■■□□□ 1.91
CTSB-222ENST00000531551 MIA2Q96PC5 1412 aa26.99■■□□□ 1.91
CTSB-222ENST00000531551 CDC42BPBQ9Y5S2 1711 aa26.98■■□□□ 1.91
CTSB-222ENST00000531551 TSPOAP1O95153 1857 aa26.98■■□□□ 1.91
CTSB-222ENST00000531551 ARAP3Q8WWN8 1544 aa26.95■■□□□ 1.9
CTSB-222ENST00000531551 TEX14Q8IWB6 1497 aa26.92■■□□□ 1.9
CTSB-222ENST00000531551 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
CTSB-222ENST00000531551 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
CTSB-222ENST00000531551 AKNAQ7Z591 1439 aa26.91■■□□□ 1.9
CTSB-222ENST00000531551 CAMSAP2Q08AD1 1489 aa26.9■■□□□ 1.9
CTSB-222ENST00000531551 HNRNPMP52272 730 aaKnown RBP eCLIP26.89■■□□□ 1.9
CTSB-222ENST00000531551 SAMD9LQ8IVG5 1584 aa26.89■■□□□ 1.89
CTSB-222ENST00000531551 PPRC1Q5VV67 1664 aaKnown RBP26.88■■□□□ 1.89
CTSB-222ENST00000531551 NEO1Q92859 1461 aa26.87■■□□□ 1.89
CTSB-222ENST00000531551 ITGAEP38570 1179 aa26.87■■□□□ 1.89
CTSB-222ENST00000531551 ADGRL1O94910 1474 aa26.86■■□□□ 1.89
CTSB-222ENST00000531551 CFAP74Q9C0B2 1584 aa26.86■■□□□ 1.89
CTSB-222ENST00000531551 TCOF1Q13428 1488 aaKnown RBP26.86■■□□□ 1.89
CTSB-222ENST00000531551 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
CTSB-222ENST00000531551 PLEKHH2Q8IVE3 1493 aa26.83■■□□□ 1.89
CTSB-222ENST00000531551 SYCP2Q9BX26 1530 aa26.82■■□□□ 1.88
CTSB-222ENST00000531551 TRIM26Q12899 539 aaPredicted RBP26.82■■□□□ 1.88
CTSB-222ENST00000531551 ABCC1P33527 1531 aa26.81■■□□□ 1.88
CTSB-222ENST00000531551 KIAA1107Q9UPP5 1409 aa26.8■■□□□ 1.88
CTSB-222ENST00000531551 ARHGEF12Q9NZN5 1544 aa26.8■■□□□ 1.88
CTSB-222ENST00000531551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.79■■□□□ 1.882e-6■■□□□ 11.9
CTSB-222ENST00000531551 RAPGEF3O95398 923 aa26.77■■□□□ 1.88
CTSB-222ENST00000531551 AFAP1Q8N556 730 aa26.77■■□□□ 1.88
CTSB-222ENST00000531551 MBD5Q9P267 1494 aa26.76■■□□□ 1.87
CTSB-222ENST00000531551 TRAPPC8Q9Y2L5 1435 aa26.76■■□□□ 1.87
CTSB-222ENST00000531551 DENND4BO75064 1496 aaPredicted RBP26.75■■□□□ 1.87
CTSB-222ENST00000531551 RSPH4AQ5TD94 716 aa26.74■■□□□ 1.87
CTSB-222ENST00000531551 TSPY4P0CV99 314 aa26.74■■□□□ 1.87
CTSB-222ENST00000531551 TSPY10P0CW01 314 aa26.74■■□□□ 1.87
CTSB-222ENST00000531551 MYT1LQ9UL68 1186 aa26.73■■□□□ 1.87
CTSB-222ENST00000531551 CHIC2Q9UKJ5 165 aa26.72■■□□□ 1.87
CTSB-222ENST00000531551 ABCC5O15440 1437 aa26.72■■□□□ 1.87
CTSB-222ENST00000531551 DAPK1P53355 1430 aa26.72■■□□□ 1.87
CTSB-222ENST00000531551 CCDC141Q6ZP82 1450 aa26.72■■□□□ 1.87
CTSB-222ENST00000531551 POGZQ7Z3K3 1410 aa26.7■■□□□ 1.86
CTSB-222ENST00000531551 COL17A1Q9UMD9 1497 aaPredicted RBP26.69■■□□□ 1.86
CTSB-222ENST00000531551 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
CTSB-222ENST00000531551 ZNF518AQ6AHZ1 1483 aa26.69■■□□□ 1.86
CTSB-222ENST00000531551 DNMT1P26358 1616 aaKnown RBP26.68■■□□□ 1.86
CTSB-222ENST00000531551 SPAG9O60271 1321 aaKnown RBP26.67■■□□□ 1.86
CTSB-222ENST00000531551 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
CTSB-222ENST00000531551 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
CTSB-222ENST00000531551 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
CTSB-222ENST00000531551 KDM6BO15054 1643 aa26.62■■□□□ 1.85
CTSB-222ENST00000531551 RICTORQ6R327 1708 aa26.59■■□□□ 1.85
CTSB-222ENST00000531551 FRMPD1Q5SYB0 1578 aa26.58■■□□□ 1.85
CTSB-222ENST00000531551 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
CTSB-222ENST00000531551 SHANK2Q9UPX8 1470 aa26.58■■□□□ 1.85
CTSB-222ENST00000531551 KDM5CP41229 1560 aa26.57■■□□□ 1.84
CTSB-222ENST00000531551 CROCC2H7BZ55 1655 aa26.57■■□□□ 1.84
CTSB-222ENST00000531551 ANKRD30AQ9BXX3 1397 aa26.55■■□□□ 1.84
CTSB-222ENST00000531551 RTEL1-TNFRSF6BF6WH68 1400 aa26.53■■□□□ 1.84
CTSB-222ENST00000531551 MLH3Q9UHC1 1453 aa26.53■■□□□ 1.84
CTSB-222ENST00000531551 ATP7AQ04656 1500 aa26.53■■□□□ 1.84
CTSB-222ENST00000531551 HECW2Q9P2P5 1572 aa26.52■■□□□ 1.84
CTSB-222ENST00000531551 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
CTSB-222ENST00000531551 MAST1Q9Y2H9 1570 aa26.52■■□□□ 1.84
CTSB-222ENST00000531551 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
CTSB-222ENST00000531551 ZMYM4Q5VZL5 1548 aa26.5■■□□□ 1.83
CTSB-222ENST00000531551 YEATS2Q9ULM3 1422 aa26.5■■□□□ 1.83
CTSB-222ENST00000531551 ROCK1Q13464 1354 aa26.5■■□□□ 1.83
CTSB-222ENST00000531551 INO80Q9ULG1 1556 aaPredicted RBP26.49■■□□□ 1.83
CTSB-222ENST00000531551 ADGRL2O95490 1459 aa26.49■■□□□ 1.83
CTSB-222ENST00000531551 KIF15Q9NS87 1388 aa26.48■■□□□ 1.83
CTSB-222ENST00000531551 KIDINS220Q9ULH0 1771 aa26.47■■□□□ 1.83
CTSB-222ENST00000531551 MAGI2Q86UL8 1455 aa26.47■■□□□ 1.83
CTSB-222ENST00000531551 ADGBQ8N7X0 1667 aa26.46■■□□□ 1.83
CTSB-222ENST00000531551 PLXNC1O60486 1568 aa26.42■■□□□ 1.82
CTSB-222ENST00000531551 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
CTSB-222ENST00000531551 NAIPQ13075 1403 aa26.41■■□□□ 1.82
CTSB-222ENST00000531551 ABCA6Q8N139 1617 aa26.41■■□□□ 1.82
CTSB-222ENST00000531551 DIP2CQ9Y2E4 1556 aa26.4■■□□□ 1.82
CTSB-222ENST00000531551 A2MP01023 1474 aa26.38■■□□□ 1.81
CTSB-222ENST00000531551 DHX29Q7Z478 1369 aaKnown RBP26.38■■□□□ 1.81
CTSB-222ENST00000531551 SETD5Q9C0A6 1442 aa26.38■■□□□ 1.81
CTSB-222ENST00000531551 ATP10AO60312 1499 aa26.37■■□□□ 1.81
CTSB-222ENST00000531551 ANKRD50Q9ULJ7 1429 aa26.37■■□□□ 1.81
CTSB-222ENST00000531551 DUOX2Q9NRD8 1548 aa26.37■■□□□ 1.81
CTSB-222ENST00000531551 ARHGEF40Q8TER5 1519 aa26.36■■□□□ 1.81
CTSB-222ENST00000531551 RAB3GAP2Q9H2M9 1393 aa26.32■■□□□ 1.8
CTSB-222ENST00000531551 KIF3BO15066 747 aa26.32■■□□□ 1.8
CTSB-222ENST00000531551 ARID4BQ4LE39 1312 aaPredicted RBP26.31■■□□□ 1.8
CTSB-222ENST00000531551 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
CTSB-222ENST00000531551 GCC2Q8IWJ2 1684 aa26.3■■□□□ 1.8
CTSB-222ENST00000531551 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
CTSB-222ENST00000531551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.26■■□□□ 1.79
CTSB-222ENST00000531551 GGT6Q6P531 493 aa26.25■■□□□ 1.79
CTSB-222ENST00000531551 MLECQ14165 292 aa26.25■■□□□ 1.79
CTSB-222ENST00000531551 REREQ9P2R6 1566 aa26.22■■□□□ 1.79
CTSB-222ENST00000531551 EIF2AK4Q9P2K8 1649 aaKnown RBP26.18■■□□□ 1.78
CTSB-222ENST00000531551 SIGLEC1Q9BZZ2 1709 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms