RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	CDC42BPB	Q9Y5S2	1711 aa		33.08	■■■□□ 2.89
PABPC4-225	ENST00000531243	NEO1	Q92859	1461 aa		33.08	■■■□□ 2.89
PABPC4-225	ENST00000531243	ARHGAP5	Q13017	1502 aa		33.07	■■■□□ 2.88
PABPC4-225	ENST00000531243	FANCA	O15360	1455 aa		33.06	■■■□□ 2.88
PABPC4-225	ENST00000531243	EFCAB2	Q5VUJ9	269 aa		33.05	■■■□□ 2.88
PABPC4-225	ENST00000531243	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.03	■■■□□ 2.88
PABPC4-225	ENST00000531243	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.98	■■■□□ 2.87
PABPC4-225	ENST00000531243	KDM6B	O15054	1643 aa		32.98	■■■□□ 2.87
PABPC4-225	ENST00000531243	AKNA	Q7Z591	1439 aa		32.97	■■■□□ 2.87
PABPC4-225	ENST00000531243	MYOM3	Q5VTT5	1437 aa		32.91	■■■□□ 2.86
PABPC4-225	ENST00000531243	ADGRL1	O94910	1474 aa		32.91	■■■□□ 2.86
PABPC4-225	ENST00000531243	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.9	■■■□□ 2.86
PABPC4-225	ENST00000531243	PLEKHH2	Q8IVE3	1493 aa		32.87	■■■□□ 2.85
PABPC4-225	ENST00000531243	MIA2	Q96PC5	1412 aa		32.87	■■■□□ 2.85
PABPC4-225	ENST00000531243	SAMD9L	Q8IVG5	1584 aa		32.84	■■■□□ 2.85
PABPC4-225	ENST00000531243	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.84	■■■□□ 2.85
PABPC4-225	ENST00000531243	DENND4B	O75064	1496 aa	Predicted RBP	32.84	■■■□□ 2.85
PABPC4-225	ENST00000531243	SCAPER	Q9BY12	1400 aa		32.83	■■■□□ 2.85
PABPC4-225	ENST00000531243	ABCC1	P33527	1531 aa		32.82	■■■□□ 2.84
PABPC4-225	ENST00000531243	KIAA1107	Q9UPP5	1409 aa		32.77	■■■□□ 2.84
PABPC4-225	ENST00000531243	RICTOR	Q6R327	1708 aa		32.77	■■■□□ 2.84
PABPC4-225	ENST00000531243	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.77	■■■□□ 2.84
PABPC4-225	ENST00000531243	CAMSAP2	Q08AD1	1489 aa		32.76	■■■□□ 2.84
PABPC4-225	ENST00000531243	FGD6	Q6ZV73	1430 aa		32.75	■■■□□ 2.83
PABPC4-225	ENST00000531243	PTPN23	Q9H3S7	1636 aa		32.74	■■■□□ 2.83
PABPC4-225	ENST00000531243	ZNF518A	Q6AHZ1	1483 aa		32.74	■■■□□ 2.83
PABPC4-225	ENST00000531243	SYCP2	Q9BX26	1530 aa		32.73	■■■□□ 2.83
PABPC4-225	ENST00000531243	POGZ	Q7Z3K3	1410 aa		32.73	■■■□□ 2.83
PABPC4-225	ENST00000531243	RAPGEF3	O95398	923 aa		32.72	■■■□□ 2.83
PABPC4-225	ENST00000531243	RSPH4A	Q5TD94	716 aa		32.71	■■■□□ 2.83
PABPC4-225	ENST00000531243	ZNF644	Q9H582	1327 aa	Predicted RBP	32.69	■■■□□ 2.82
PABPC4-225	ENST00000531243	FRMPD1	Q5SYB0	1578 aa		32.68	■■■□□ 2.82
PABPC4-225	ENST00000531243	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
PABPC4-225	ENST00000531243	ARHGEF12	Q9NZN5	1544 aa		32.67	■■■□□ 2.82
PABPC4-225	ENST00000531243	TCOF1	Q13428	1488 aa	Known RBP	32.66	■■■□□ 2.82
PABPC4-225	ENST00000531243	ARHGEF5	Q12774	1597 aa		32.64	■■■□□ 2.82
PABPC4-225	ENST00000531243	ZMYM4	Q5VZL5	1548 aa		32.64	■■■□□ 2.82
PABPC4-225	ENST00000531243	KDM5C	P41229	1560 aa		32.63	■■■□□ 2.81
PABPC4-225	ENST00000531243	TRAPPC8	Q9Y2L5	1435 aa		32.63	■■■□□ 2.81
PABPC4-225	ENST00000531243	MAGI2	Q86UL8	1455 aa		32.62	■■■□□ 2.81
PABPC4-225	ENST00000531243	MBD5	Q9P267	1494 aa		32.61	■■■□□ 2.81
PABPC4-225	ENST00000531243	AFAP1	Q8N556	730 aa		32.61	■■■□□ 2.81
PABPC4-225	ENST00000531243	MYT1L	Q9UL68	1186 aa		32.61	■■■□□ 2.81
PABPC4-225	ENST00000531243	CCDC141	Q6ZP82	1450 aa		32.61	■■■□□ 2.81
PABPC4-225	ENST00000531243	HECW2	Q9P2P5	1572 aa		32.59	■■■□□ 2.81
PABPC4-225	ENST00000531243	FAM50A	Q14320	339 aa	Known RBP	32.58	■■■□□ 2.81
PABPC4-225	ENST00000531243	TSPY4	P0CV99	314 aa		32.56	■■■□□ 2.8
PABPC4-225	ENST00000531243	TSPY10	P0CW01	314 aa		32.56	■■■□□ 2.8
PABPC4-225	ENST00000531243	MLH3	Q9UHC1	1453 aa		32.54	■■■□□ 2.8
PABPC4-225	ENST00000531243	SPAG9	O60271	1321 aa	Known RBP	32.54	■■■□□ 2.8
PABPC4-225	ENST00000531243	ZFYVE16	Q7Z3T8	1539 aa		32.54	■■■□□ 2.8
PABPC4-225	ENST00000531243	DNMT1	P26358	1616 aa	Known RBP	32.53	■■■□□ 2.8
PABPC4-225	ENST00000531243	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
PABPC4-225	ENST00000531243	RRBP1	Q9P2E9	1410 aa	Known RBP	32.51	■■■□□ 2.8
PABPC4-225	ENST00000531243	CROCC2	H7BZ55	1655 aa		32.5	■■■□□ 2.79
PABPC4-225	ENST00000531243	ARHGEF40	Q8TER5	1519 aa		32.49	■■■□□ 2.79
PABPC4-225	ENST00000531243	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.49	■■■□□ 2.79
PABPC4-225	ENST00000531243	KIDINS220	Q9ULH0	1771 aa		32.48	■■■□□ 2.79
PABPC4-225	ENST00000531243	ATP7A	Q04656	1500 aa		32.48	■■■□□ 2.79
PABPC4-225	ENST00000531243	INO80	Q9ULG1	1556 aa	Predicted RBP	32.48	■■■□□ 2.79
PABPC4-225	ENST00000531243	DAPK1	P53355	1430 aa		32.46	■■■□□ 2.79
PABPC4-225	ENST00000531243	MAST1	Q9Y2H9	1570 aa		32.45	■■■□□ 2.79
PABPC4-225	ENST00000531243	SHANK2	Q9UPX8	1470 aa		32.44	■■■□□ 2.78
PABPC4-225	ENST00000531243	ABCC5	O15440	1437 aa		32.43	■■■□□ 2.78
PABPC4-225	ENST00000531243	YEATS2	Q9ULM3	1422 aa		32.42	■■■□□ 2.78
PABPC4-225	ENST00000531243	C9orf84	Q5VXU9	1444 aa		32.41	■■■□□ 2.78
PABPC4-225	ENST00000531243	ATP10A	O60312	1499 aa		32.41	■■■□□ 2.78
PABPC4-225	ENST00000531243	ADGB	Q8N7X0	1667 aa		32.4	■■■□□ 2.78
PABPC4-225	ENST00000531243	DIP2C	Q9Y2E4	1556 aa		32.39	■■■□□ 2.78
PABPC4-225	ENST00000531243	ABCA6	Q8N139	1617 aa		32.39	■■■□□ 2.78
PABPC4-225	ENST00000531243	PLXNC1	O60486	1568 aa		32.33	■■■□□ 2.77
PABPC4-225	ENST00000531243	RERE	Q9P2R6	1566 aa		32.33	■■■□□ 2.77
PABPC4-225	ENST00000531243	ANKRD30A	Q9BXX3	1397 aa		32.31	■■■□□ 2.76
PABPC4-225	ENST00000531243	ITGAE	P38570	1179 aa		32.29	■■■□□ 2.76
PABPC4-225	ENST00000531243	CHIC2	Q9UKJ5	165 aa		32.28	■■■□□ 2.76
PABPC4-225	ENST00000531243	A2M	P01023	1474 aa		32.27	■■■□□ 2.76
PABPC4-225	ENST00000531243	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.26	■■■□□ 2.76
PABPC4-225	ENST00000531243	ADGRL2	O95490	1459 aa		32.25	■■■□□ 2.75
PABPC4-225	ENST00000531243	DHX29	Q7Z478	1369 aa	Known RBP	32.22	■■■□□ 2.75
PABPC4-225	ENST00000531243	DUOX2	Q9NRD8	1548 aa		32.21	■■■□□ 2.75
PABPC4-225	ENST00000531243	AGL	P35573	1532 aa		32.21	■■■□□ 2.75
PABPC4-225	ENST00000531243	ROCK1	Q13464	1354 aa		32.2	■■■□□ 2.75
PABPC4-225	ENST00000531243	NCOA1	Q15788	1441 aa		32.2	■■■□□ 2.75
PABPC4-225	ENST00000531243	KIF15	Q9NS87	1388 aa		32.19	■■■□□ 2.74
PABPC4-225	ENST00000531243	PTPRK	Q15262	1439 aa		32.19	■■■□□ 2.74
PABPC4-225	ENST00000531243	RRP7BP	Q9NSQ0	103 aa		32.18	■■■□□ 2.74
PABPC4-225	ENST00000531243	SIGLEC1	Q9BZZ2	1709 aa		32.16	■■■□□ 2.74
PABPC4-225	ENST00000531243	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.15	■■■□□ 2.74
PABPC4-225	ENST00000531243	BCORL1	Q5H9F3	1711 aa		32.14	■■■□□ 2.74
PABPC4-225	ENST00000531243	ERBIN	Q96RT1	1412 aa		32.13	■■■□□ 2.73
PABPC4-225	ENST00000531243	KIF3B	O15066	747 aa		32.06	■■■□□ 2.72
PABPC4-225	ENST00000531243	MLEC	Q14165	292 aa		32.05	■■■□□ 2.72
PABPC4-225	ENST00000531243	ANKRD50	Q9ULJ7	1429 aa		32.04	■■■□□ 2.72
PABPC4-225	ENST00000531243	GCC2	Q8IWJ2	1684 aa		32.04	■■■□□ 2.72
PABPC4-225	ENST00000531243	ESF1	Q9H501	851 aa	Known RBP	32.02	■■■□□ 2.72
PABPC4-225	ENST00000531243	ADAMTSL3	P82987	1691 aa		32.02	■■■□□ 2.72
PABPC4-225	ENST00000531243	GGT6	Q6P531	493 aa		32.01	■■■□□ 2.71
PABPC4-225	ENST00000531243	FER1L4	A9Z1Z3	1794 aa		32.01	■■■□□ 2.71
PABPC4-225	ENST00000531243	PPP6R1	Q9UPN7	881 aa		32	■■■□□ 2.71
PABPC4-225	ENST00000531243	RNF17	Q9BXT8	1623 aa	Known RBP	32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms