RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-225ENST00000531243 NISCHQ9Y2I1 1504 aa50.67■■■■■ 5.7
PABPC4-225ENST00000531243 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
PABPC4-225ENST00000531243 ABCC9O60706 1549 aa43.37■■■■■ 4.53
PABPC4-225ENST00000531243 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
PABPC4-225ENST00000531243 DCAF8L2P0C7V8 631 aa42.17■■■■■ 4.34
PABPC4-225ENST00000531243 NACADO15069 1562 aa42.11■■■■■ 4.33
PABPC4-225ENST00000531243 RB1CC1Q8TDY2 1594 aa42.06■■■■■ 4.32
PABPC4-225ENST00000531243 MYO15BQ96JP2 1530 aa42■■■■■ 4.31
PABPC4-225ENST00000531243 DCAF1Q9Y4B6 1507 aa42■■■■■ 4.31
PABPC4-225ENST00000531243 UNC13AQ9UPW8 1703 aa41.1■■■■■ 4.17
PABPC4-225ENST00000531243 SCRIBQ14160 1630 aa40.95■■■■■ 4.15
PABPC4-225ENST00000531243 BICRAQ9NZM4 1560 aa40.62■■■■■ 4.09
PABPC4-225ENST00000531243 PABPN1Q86U42 306 aaKnown RBP eCLIP40.56■■■■■ 4.08
PABPC4-225ENST00000531243 SHROOM4Q9ULL8 1493 aa40.39■■■■■ 4.06
PABPC4-225ENST00000531243 EIF4G1Q04637 1599 aaKnown RBP39.58■■■■□ 3.93
PABPC4-225ENST00000531243 CECR2Q9BXF3 1484 aa39.33■■■■□ 3.89
PABPC4-225ENST00000531243 BAZ1AQ9NRL2 1556 aaPredicted RBP39.3■■■■□ 3.88
PABPC4-225ENST00000531243 CC2D2AQ9P2K1 1620 aa39.3■■■■□ 3.88
PABPC4-225ENST00000531243 SMARCA4P51532 1647 aa39.24■■■■□ 3.87
PABPC4-225ENST00000531243 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
PABPC4-225ENST00000531243 MROH2BQ7Z745 1585 aa39■■■■□ 3.83
PABPC4-225ENST00000531243 SMARCA2P51531 1590 aa38.93■■■■□ 3.82
PABPC4-225ENST00000531243 ATAD2BQ9ULI0 1458 aa38.86■■■■□ 3.81
PABPC4-225ENST00000531243 PEG3Q9GZU2 1588 aa38.85■■■■□ 3.81
PABPC4-225ENST00000531243 NCAPD3P42695 1498 aa38.78■■■■□ 3.8
PABPC4-225ENST00000531243 RSF1Q96T23 1441 aaPredicted RBP38.73■■■■□ 3.79
PABPC4-225ENST00000531243 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
PABPC4-225ENST00000531243 WIZO95785 1651 aa38.67■■■■□ 3.78
PABPC4-225ENST00000531243 BAZ1BQ9UIG0 1483 aaKnown RBP38.63■■■■□ 3.77
PABPC4-225ENST00000531243 TOP2AP11388 1531 aaKnown RBP38.31■■■■□ 3.72
PABPC4-225ENST00000531243 SUPT5HO00267 1087 aaKnown RBP38.17■■■■□ 3.7
PABPC4-225ENST00000531243 CCDC88BA6NC98 1476 aa37.8■■■■□ 3.64
PABPC4-225ENST00000531243 LAMC3Q9Y6N6 1575 aa37.76■■■■□ 3.64
PABPC4-225ENST00000531243 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
PABPC4-225ENST00000531243 NESP48681 1621 aa37.63■■■■□ 3.61
PABPC4-225ENST00000531243 CFTRP13569 1480 aa37.55■■■■□ 3.6
PABPC4-225ENST00000531243 PRDM2Q13029 1718 aa37.49■■■■□ 3.59
PABPC4-225ENST00000531243 PDS5BQ9NTI5 1447 aa37.48■■■■□ 3.59
PABPC4-225ENST00000531243 ERCC6Q03468 1493 aa37.44■■■■□ 3.58
PABPC4-225ENST00000531243 KIF21AQ7Z4S6 1674 aa37.32■■■■□ 3.57
PABPC4-225ENST00000531243 FANCD2Q9BXW9 1451 aa37.26■■■■□ 3.55
PABPC4-225ENST00000531243 CEP164Q9UPV0 1460 aa37.2■■■■□ 3.55
PABPC4-225ENST00000531243 MRC2Q9UBG0 1479 aa37.03■■■■□ 3.52
PABPC4-225ENST00000531243 THOC2Q8NI27 1593 aaKnown RBP37.03■■■■□ 3.52
PABPC4-225ENST00000531243 WDR62O43379 1518 aa36.88■■■■□ 3.49
PABPC4-225ENST00000531243 CUX2O14529 1486 aa36.87■■■■□ 3.49
PABPC4-225ENST00000531243 ABCC8Q09428 1581 aa36.86■■■■□ 3.49
PABPC4-225ENST00000531243 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
PABPC4-225ENST00000531243 DNMBPQ6XZF7 1577 aa36.75■■■■□ 3.47
PABPC4-225ENST00000531243 TOPBP1Q92547 1522 aa36.7■■■■□ 3.47
PABPC4-225ENST00000531243 WRNQ14191 1432 aaPredicted RBP eCLIP36.58■■■■□ 3.45
PABPC4-225ENST00000531243 CUX1P39880 1505 aa36.57■■■■□ 3.44
PABPC4-225ENST00000531243 BIVM-ERCC5R4GMW8 1640 aa36.48■■■■□ 3.43
PABPC4-225ENST00000531243 TOP2BQ02880 1626 aa36.47■■■■□ 3.43
PABPC4-225ENST00000531243 SYNJ1O43426 1573 aa36.42■■■■□ 3.42
PABPC4-225ENST00000531243 POLA1P09884 1462 aaPredicted RBP36.42■■■■□ 3.42
PABPC4-225ENST00000531243 FGD5Q6ZNL6 1462 aa36.41■■■■□ 3.42
PABPC4-225ENST00000531243 IFT140Q96RY7 1462 aa36.4■■■■□ 3.42
PABPC4-225ENST00000531243 SOGA1O94964 1423 aa36.31■■■■□ 3.4
PABPC4-225ENST00000531243 TARBP1Q13395 1621 aaKnown RBP36.26■■■■□ 3.4
PABPC4-225ENST00000531243 RAD54L2Q9Y4B4 1467 aa36.21■■■■□ 3.39
PABPC4-225ENST00000531243 WDR97A6NE52 1622 aa36.14■■■■□ 3.38
PABPC4-225ENST00000531243 AEBP2Q6ZN18 517 aaPredicted RBP36.12■■■■□ 3.37
PABPC4-225ENST00000531243 ABCA10Q8WWZ4 1543 aa36.1■■■■□ 3.37
PABPC4-225ENST00000531243 TRIM41Q8WV44 630 aa36.09■■■■□ 3.37
PABPC4-225ENST00000531243 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
PABPC4-225ENST00000531243 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
PABPC4-225ENST00000531243 TDRD9Q8NDG6 1382 aaKnown RBP35.98■■■■□ 3.35
PABPC4-225ENST00000531243 AQRO60306 1485 aaKnown RBP eCLIP35.97■■■■□ 3.356e-12■■■■□ 20.3
PABPC4-225ENST00000531243 ABCA5Q8WWZ7 1642 aa35.92■■■■□ 3.34
PABPC4-225ENST00000531243 GAPVD1Q14C86 1478 aa35.91■■■■□ 3.34
PABPC4-225ENST00000531243 CHIC1Q5VXU3 224 aa35.87■■■■□ 3.33
PABPC4-225ENST00000531243 PBRM1Q86U86 1689 aa35.87■■■■□ 3.33
PABPC4-225ENST00000531243 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
PABPC4-225ENST00000531243 KIF27Q86VH2 1401 aa35.82■■■■□ 3.32
PABPC4-225ENST00000531243 MAGI1Q96QZ7 1491 aaPredicted RBP35.72■■■■□ 3.31
PABPC4-225ENST00000531243 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
PABPC4-225ENST00000531243 SNAPC4Q5SXM2 1469 aa35.68■■■■□ 3.3
PABPC4-225ENST00000531243 CHD1O14646 1710 aa35.56■■■■□ 3.28
PABPC4-225ENST00000531243 SYNJ2O15056 1496 aa35.55■■■■□ 3.28
PABPC4-225ENST00000531243 CUL7Q14999 1698 aa35.55■■■■□ 3.28
PABPC4-225ENST00000531243 ADAMTS12P58397 1594 aa35.54■■■■□ 3.28
PABPC4-225ENST00000531243 CHMP7Q8WUX9 453 aaPredicted RBP35.53■■■■□ 3.28
PABPC4-225ENST00000531243 FBLN2P98095 1184 aa35.52■■■■□ 3.28
PABPC4-225ENST00000531243 IGF1RP08069 1367 aa35.51■■■■□ 3.28
PABPC4-225ENST00000531243 FHAD1B1AJZ9 1412 aa35.51■■■■□ 3.28
PABPC4-225ENST00000531243 EEA1Q15075 1411 aa35.5■■■■□ 3.27
PABPC4-225ENST00000531243 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
PABPC4-225ENST00000531243 OSCARQ8IYS5 282 aa35.42■■■■□ 3.26
PABPC4-225ENST00000531243 CARMIL1Q5VZK9 1371 aa35.38■■■■□ 3.25
PABPC4-225ENST00000531243 GRIN2AQ12879 1464 aa35.36■■■■□ 3.25
PABPC4-225ENST00000531243 CSRNP3Q8WYN3 585 aa35.31■■■■□ 3.24
PABPC4-225ENST00000531243 FAM9AQ8IZU1 332 aaPredicted RBP35.25■■■■□ 3.23
PABPC4-225ENST00000531243 RAPGEF2Q9Y4G8 1499 aa35.24■■■■□ 3.23
PABPC4-225ENST00000531243 PRXQ9BXM0 1461 aa35.16■■■■□ 3.22
PABPC4-225ENST00000531243 NUP160Q12769 1436 aa35.15■■■■□ 3.22
PABPC4-225ENST00000531243 CEP170Q5SW79 1584 aa35.14■■■■□ 3.22
PABPC4-225ENST00000531243 CLASP1Q7Z460 1538 aa35.1■■■■□ 3.21
PABPC4-225ENST00000531243 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
PABPC4-225ENST00000531243 KIF21BO75037 1637 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 277 ms