RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 POGKQ9P215 609 aa20.09■□□□□ 0.81
PCDHA6-203ENST00000529310 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
PCDHA6-203ENST00000529310 NAP1L2Q9ULW6 460 aaPredicted RBP20.08■□□□□ 0.81
PCDHA6-203ENST00000529310 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
PCDHA6-203ENST00000529310 CCER2I3L3R5 266 aa20.06■□□□□ 0.8
PCDHA6-203ENST00000529310 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
PCDHA6-203ENST00000529310 SPRYD3Q8NCJ5 442 aa20.05■□□□□ 0.8
PCDHA6-203ENST00000529310 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
PCDHA6-203ENST00000529310 MLECQ14165 292 aa20.04■□□□□ 0.8
PCDHA6-203ENST00000529310 MCCP23508 829 aa20.04■□□□□ 0.8
PCDHA6-203ENST00000529310 TMF1P82094 1093 aa20.03■□□□□ 0.8
PCDHA6-203ENST00000529310 DRC7Q8IY82 874 aa20.02■□□□□ 0.79
PCDHA6-203ENST00000529310 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
PCDHA6-203ENST00000529310 TIMELESSQ9UNS1 1208 aa19.99■□□□□ 0.79
PCDHA6-203ENST00000529310 LMOD2Q6P5Q4 547 aa19.98■□□□□ 0.79
PCDHA6-203ENST00000529310 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
PCDHA6-203ENST00000529310 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
PCDHA6-203ENST00000529310 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
PCDHA6-203ENST00000529310 GBP4Q96PP9 640 aa19.94■□□□□ 0.78
PCDHA6-203ENST00000529310 WIZO95785 1651 aa19.93■□□□□ 0.78
PCDHA6-203ENST00000529310 PTMSP20962 102 aa19.93■□□□□ 0.78
PCDHA6-203ENST00000529310 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
PCDHA6-203ENST00000529310 NPHP1O15259 732 aa19.92■□□□□ 0.78
PCDHA6-203ENST00000529310 MORC1Q86VD1 984 aa19.92■□□□□ 0.78
PCDHA6-203ENST00000529310 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
PCDHA6-203ENST00000529310 GGT6Q6P531 493 aa19.9■□□□□ 0.78
PCDHA6-203ENST00000529310 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
PCDHA6-203ENST00000529310 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
PCDHA6-203ENST00000529310 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
PCDHA6-203ENST00000529310 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
PCDHA6-203ENST00000529310 GZF1Q9H116 711 aaPredicted RBP19.88■□□□□ 0.77
PCDHA6-203ENST00000529310 IPO8O15397 1037 aaKnown RBP19.88■□□□□ 0.77
PCDHA6-203ENST00000529310 SLKQ9H2G2 1235 aaPredicted RBP19.87■□□□□ 0.77
PCDHA6-203ENST00000529310 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
PCDHA6-203ENST00000529310 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
PCDHA6-203ENST00000529310 KIAA1211Q6ZU35 1233 aa19.85■□□□□ 0.77
PCDHA6-203ENST00000529310 RWDD1Q9H446 243 aaPredicted RBP19.85■□□□□ 0.77
PCDHA6-203ENST00000529310 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
PCDHA6-203ENST00000529310 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
PCDHA6-203ENST00000529310 APBB1O00213 710 aa19.84■□□□□ 0.77
PCDHA6-203ENST00000529310 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
PCDHA6-203ENST00000529310 ARHGAP35Q9NRY4 1499 aa19.84■□□□□ 0.77
PCDHA6-203ENST00000529310 GNL2Q13823 731 aaKnown RBP19.84■□□□□ 0.77
PCDHA6-203ENST00000529310 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
PCDHA6-203ENST00000529310 RAPGEF2Q9Y4G8 1499 aa19.81■□□□□ 0.76
PCDHA6-203ENST00000529310 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
PCDHA6-203ENST00000529310 SYAP1Q96A49 352 aaPredicted RBP19.81■□□□□ 0.76
PCDHA6-203ENST00000529310 GOLGA6L3A6NEY3 463 aa19.8■□□□□ 0.76
PCDHA6-203ENST00000529310 SOX12O15370 315 aa19.8■□□□□ 0.76
PCDHA6-203ENST00000529310 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
PCDHA6-203ENST00000529310 ARID3AQ99856 593 aa19.79■□□□□ 0.76
PCDHA6-203ENST00000529310 ITPRIPQ8IWB1 547 aa19.78■□□□□ 0.76
PCDHA6-203ENST00000529310 IPO9Q96P70 1041 aaKnown RBP19.78■□□□□ 0.76
PCDHA6-203ENST00000529310 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
PCDHA6-203ENST00000529310 SETD5Q9C0A6 1442 aa19.78■□□□□ 0.76
PCDHA6-203ENST00000529310 HTATSF1O43719 755 aaKnown RBP19.78■□□□□ 0.76
PCDHA6-203ENST00000529310 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
PCDHA6-203ENST00000529310 CLSTN1O94985 981 aa19.76■□□□□ 0.75
PCDHA6-203ENST00000529310 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.76■□□□□ 0.75
PCDHA6-203ENST00000529310 RALBP1Q15311 655 aa19.76■□□□□ 0.75
PCDHA6-203ENST00000529310 PMFBP1Q8TBY8 1022 aa19.75■□□□□ 0.75
PCDHA6-203ENST00000529310 SAFB2Q14151 953 aaKnown RBP eCLIP19.75■□□□□ 0.75
PCDHA6-203ENST00000529310 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
PCDHA6-203ENST00000529310 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
PCDHA6-203ENST00000529310 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
PCDHA6-203ENST00000529310 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.75
PCDHA6-203ENST00000529310 RSPH4AQ5TD94 716 aa19.72■□□□□ 0.75
PCDHA6-203ENST00000529310 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
PCDHA6-203ENST00000529310 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.74
PCDHA6-203ENST00000529310 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.74
PCDHA6-203ENST00000529310 ISY1Q9ULR0 285 aaKnown RBP19.71■□□□□ 0.74
PCDHA6-203ENST00000529310 PKD2Q13563 968 aa19.7■□□□□ 0.74
PCDHA6-203ENST00000529310 TNNT3P45378 269 aaPredicted RBP19.7■□□□□ 0.74
PCDHA6-203ENST00000529310 TPM4P67936 248 aa19.7■□□□□ 0.74
PCDHA6-203ENST00000529310 SPAG9O60271 1321 aaKnown RBP19.68■□□□□ 0.74
PCDHA6-203ENST00000529310 KIF3BO15066 747 aa19.67■□□□□ 0.74
PCDHA6-203ENST00000529310 NOC3LQ8WTT2 800 aaKnown RBP19.67■□□□□ 0.74
PCDHA6-203ENST00000529310 PTPRGP23470 1445 aa19.67■□□□□ 0.74
PCDHA6-203ENST00000529310 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
PCDHA6-203ENST00000529310 FOXD1Q16676 465 aa19.65■□□□□ 0.74
PCDHA6-203ENST00000529310 FHOD3Q2V2M9 1422 aa19.64■□□□□ 0.74
PCDHA6-203ENST00000529310 ROCK2O75116 1388 aaKnown RBP19.64■□□□□ 0.73
PCDHA6-203ENST00000529310 STK26Q9P289 416 aa19.64■□□□□ 0.73
PCDHA6-203ENST00000529310 CSPP1Q1MSJ5 1256 aa19.64■□□□□ 0.73
PCDHA6-203ENST00000529310 SMC4Q9NTJ3 1288 aa19.64■□□□□ 0.73
PCDHA6-203ENST00000529310 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
PCDHA6-203ENST00000529310 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
PCDHA6-203ENST00000529310 NUP155O75694 1391 aa19.62■□□□□ 0.73
PCDHA6-203ENST00000529310 HNRNPMP52272 730 aaKnown RBP eCLIP19.62■□□□□ 0.73
PCDHA6-203ENST00000529310 CCDC34Q96HJ3 373 aa19.62■□□□□ 0.73
PCDHA6-203ENST00000529310 TRIM6-TRIM34B2RNG4 842 aa19.61■□□□□ 0.73
PCDHA6-203ENST00000529310 HMMRO75330 724 aa19.61■□□□□ 0.73
PCDHA6-203ENST00000529310 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
PCDHA6-203ENST00000529310 GOLGA6L1Q8N7Z2 621 aa19.61■□□□□ 0.73
PCDHA6-203ENST00000529310 STK31Q9BXU1 1019 aa19.61■□□□□ 0.73
PCDHA6-203ENST00000529310 HSP90B1P14625 803 aaKnown RBP19.6■□□□□ 0.73
PCDHA6-203ENST00000529310 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
PCDHA6-203ENST00000529310 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
PCDHA6-203ENST00000529310 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
PCDHA6-203ENST00000529310 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms