RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
PCDHA6-203ENST00000529310 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
PCDHA6-203ENST00000529310 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
PCDHA6-203ENST00000529310 PELP1Q8IZL8 1130 aaKnown RBP25.21■■□□□ 1.63
PCDHA6-203ENST00000529310 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
PCDHA6-203ENST00000529310 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
PCDHA6-203ENST00000529310 APLP2Q06481 763 aa24.52■■□□□ 1.52
PCDHA6-203ENST00000529310 PCGF6Q9BYE7 350 aa24.23■■□□□ 1.47
PCDHA6-203ENST00000529310 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
PCDHA6-203ENST00000529310 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
PCDHA6-203ENST00000529310 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
PCDHA6-203ENST00000529310 TTBK1Q5TCY1 1321 aaPredicted RBP24.08■■□□□ 1.45
PCDHA6-203ENST00000529310 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
PCDHA6-203ENST00000529310 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
PCDHA6-203ENST00000529310 MYT1Q01538 1121 aa23.74■■□□□ 1.39
PCDHA6-203ENST00000529310 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
PCDHA6-203ENST00000529310 NEFLP07196 543 aa23.64■■□□□ 1.37
PCDHA6-203ENST00000529310 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
PCDHA6-203ENST00000529310 YTHDC1Q96MU7 727 aaKnown RBP23.53■■□□□ 1.36
PCDHA6-203ENST00000529310 ATP1B4Q9UN42 357 aaPredicted RBP23.48■■□□□ 1.35
PCDHA6-203ENST00000529310 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
PCDHA6-203ENST00000529310 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
PCDHA6-203ENST00000529310 TRIM26Q12899 539 aaPredicted RBP23.07■■□□□ 1.28
PCDHA6-203ENST00000529310 DAXXQ9UER7 740 aaPredicted RBP23.04■■□□□ 1.28
PCDHA6-203ENST00000529310 HRCP23327 699 aa22.98■■□□□ 1.27
PCDHA6-203ENST00000529310 ABCC9O60706 1549 aa22.97■■□□□ 1.27
PCDHA6-203ENST00000529310 POLR3GLQ9BT43 218 aa22.79■■□□□ 1.24
PCDHA6-203ENST00000529310 ITGAEP38570 1179 aa22.75■■□□□ 1.23
PCDHA6-203ENST00000529310 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
PCDHA6-203ENST00000529310 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
PCDHA6-203ENST00000529310 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
PCDHA6-203ENST00000529310 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
PCDHA6-203ENST00000529310 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
PCDHA6-203ENST00000529310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
PCDHA6-203ENST00000529310 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
PCDHA6-203ENST00000529310 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
PCDHA6-203ENST00000529310 DIEXFQ68CQ4 756 aaKnown RBP22.47■■□□□ 1.19
PCDHA6-203ENST00000529310 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
PCDHA6-203ENST00000529310 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
PCDHA6-203ENST00000529310 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
PCDHA6-203ENST00000529310 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
PCDHA6-203ENST00000529310 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
PCDHA6-203ENST00000529310 BCANQ96GW7 911 aa22.16■■□□□ 1.14
PCDHA6-203ENST00000529310 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
PCDHA6-203ENST00000529310 CDK11AQ9UQ88 783 aaPredicted RBP22.08■■□□□ 1.12
PCDHA6-203ENST00000529310 TRIM52Q96A61 297 aa22.03■■□□□ 1.12
PCDHA6-203ENST00000529310 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
PCDHA6-203ENST00000529310 ANP32CO43423 234 aa22.01■■□□□ 1.11
PCDHA6-203ENST00000529310 FBLN2P98095 1184 aa21.97■■□□□ 1.11
PCDHA6-203ENST00000529310 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
PCDHA6-203ENST00000529310 ZBTB47Q9UFB7 747 aaPredicted RBP21.9■■□□□ 1.1
PCDHA6-203ENST00000529310 ZNF326Q5BKZ1 582 aaKnown RBP21.84■■□□□ 1.09
PCDHA6-203ENST00000529310 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
PCDHA6-203ENST00000529310 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
PCDHA6-203ENST00000529310 CANXP27824 592 aaKnown RBP21.76■■□□□ 1.07
PCDHA6-203ENST00000529310 ANP32AP39687 249 aaKnown RBP21.74■■□□□ 1.07
PCDHA6-203ENST00000529310 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
PCDHA6-203ENST00000529310 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
PCDHA6-203ENST00000529310 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
PCDHA6-203ENST00000529310 NEFMP07197 916 aa21.57■■□□□ 1.04
PCDHA6-203ENST00000529310 SLC24A1O60721 1099 aa21.56■■□□□ 1.04
PCDHA6-203ENST00000529310 NACADO15069 1562 aa21.54■■□□□ 1.04
PCDHA6-203ENST00000529310 EIF5BO60841 1220 aaKnown RBP21.54■■□□□ 1.04
PCDHA6-203ENST00000529310 FKBP8Q14318 412 aa21.47■■□□□ 1.03
PCDHA6-203ENST00000529310 ANP32BQ92688 251 aaKnown RBP21.47■■□□□ 1.03
PCDHA6-203ENST00000529310 CSRNP3Q8WYN3 585 aa21.44■■□□□ 1.02
PCDHA6-203ENST00000529310 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
PCDHA6-203ENST00000529310 NPM1P06748 294 aaKnown RBP eCLIP21.39■■□□□ 1.01
PCDHA6-203ENST00000529310 HSP90AA1P07900 732 aaKnown RBP21.37■■□□□ 1.01
PCDHA6-203ENST00000529310 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
PCDHA6-203ENST00000529310 UPF2Q9HAU5 1272 aaKnown RBP21.33■■□□□ 1.01
PCDHA6-203ENST00000529310 HNRNPUQ00839 825 aaKnown RBP eCLIP21.32■■□□□ 1
PCDHA6-203ENST00000529310 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
PCDHA6-203ENST00000529310 GLIPR1L2Q4G1C9 344 aa21.3■■□□□ 1
PCDHA6-203ENST00000529310 ESF1Q9H501 851 aaKnown RBP21.26■□□□□ 0.99
PCDHA6-203ENST00000529310 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
PCDHA6-203ENST00000529310 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
PCDHA6-203ENST00000529310 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
PCDHA6-203ENST00000529310 DDX10Q13206 875 aaKnown RBP21.21■□□□□ 0.99
PCDHA6-203ENST00000529310 NBR1Q14596 966 aa21.19■□□□□ 0.98
PCDHA6-203ENST00000529310 CCDC136Q96JN2 1154 aa21.18■□□□□ 0.98
PCDHA6-203ENST00000529310 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
PCDHA6-203ENST00000529310 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
PCDHA6-203ENST00000529310 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.1■□□□□ 0.97
PCDHA6-203ENST00000529310 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
PCDHA6-203ENST00000529310 ARXQ96QS3 562 aa21.06■□□□□ 0.96
PCDHA6-203ENST00000529310 CHGAP10645 457 aaKnown RBP21.02■□□□□ 0.95
PCDHA6-203ENST00000529310 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
PCDHA6-203ENST00000529310 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
PCDHA6-203ENST00000529310 MRS2Q9HD23 443 aa20.99■□□□□ 0.95
PCDHA6-203ENST00000529310 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
PCDHA6-203ENST00000529310 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
PCDHA6-203ENST00000529310 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
PCDHA6-203ENST00000529310 IRX6P78412 446 aaPredicted RBP20.92■□□□□ 0.94
PCDHA6-203ENST00000529310 MIER1Q8N108 512 aa20.91■□□□□ 0.94
PCDHA6-203ENST00000529310 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
PCDHA6-203ENST00000529310 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
PCDHA6-203ENST00000529310 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
PCDHA6-203ENST00000529310 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
PCDHA6-203ENST00000529310 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms