RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
RBM39-243ENST00000528062 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
RBM39-243ENST00000528062 PREX2Q70Z35 1606 aa19.2■□□□□ 0.66
RBM39-243ENST00000528062 PPRC1Q5VV67 1664 aaKnown RBP19.2■□□□□ 0.66
RBM39-243ENST00000528062 MIER1Q8N108 512 aa19.2■□□□□ 0.66
RBM39-243ENST00000528062 GPATCH8Q9UKJ3 1502 aaKnown RBP19.19■□□□□ 0.66
RBM39-243ENST00000528062 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
RBM39-243ENST00000528062 TSPOAP1O95153 1857 aa19.17■□□□□ 0.66
RBM39-243ENST00000528062 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
RBM39-243ENST00000528062 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
RBM39-243ENST00000528062 MYOM3Q5VTT5 1437 aa19.14■□□□□ 0.65
RBM39-243ENST00000528062 CCNB3Q8WWL7 1395 aa19.14■□□□□ 0.65
RBM39-243ENST00000528062 PLCH2O75038 1416 aa19.13■□□□□ 0.65
RBM39-243ENST00000528062 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
RBM39-243ENST00000528062 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
RBM39-243ENST00000528062 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
RBM39-243ENST00000528062 ARHGAP5Q13017 1502 aa19.1■□□□□ 0.65
RBM39-243ENST00000528062 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
RBM39-243ENST00000528062 PTPN23Q9H3S7 1636 aa19.08■□□□□ 0.64
RBM39-243ENST00000528062 FANCAO15360 1455 aa19.07■□□□□ 0.64
RBM39-243ENST00000528062 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
RBM39-243ENST00000528062 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
RBM39-243ENST00000528062 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
RBM39-243ENST00000528062 DHX57Q6P158 1386 aaKnown RBP19.05■□□□□ 0.64
RBM39-243ENST00000528062 ZNF644Q9H582 1327 aaPredicted RBP19.05■□□□□ 0.64
RBM39-243ENST00000528062 CAMSAP2Q08AD1 1489 aa19.04■□□□□ 0.64
RBM39-243ENST00000528062 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
RBM39-243ENST00000528062 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
RBM39-243ENST00000528062 ABCC1P33527 1531 aa19.03■□□□□ 0.64
RBM39-243ENST00000528062 CFAP74Q9C0B2 1584 aa19.03■□□□□ 0.64
RBM39-243ENST00000528062 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.64
RBM39-243ENST00000528062 SLC24A1O60721 1099 aa19.01■□□□□ 0.63
RBM39-243ENST00000528062 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
RBM39-243ENST00000528062 NEO1Q92859 1461 aa19■□□□□ 0.63
RBM39-243ENST00000528062 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
RBM39-243ENST00000528062 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
RBM39-243ENST00000528062 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
RBM39-243ENST00000528062 TEX14Q8IWB6 1497 aa18.98■□□□□ 0.63
RBM39-243ENST00000528062 EFCAB2Q5VUJ9 269 aa18.98■□□□□ 0.63
RBM39-243ENST00000528062 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
RBM39-243ENST00000528062 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
RBM39-243ENST00000528062 COL17A1Q9UMD9 1497 aaPredicted RBP18.95■□□□□ 0.62
RBM39-243ENST00000528062 RICTORQ6R327 1708 aa18.95■□□□□ 0.62
RBM39-243ENST00000528062 DNMT1P26358 1616 aaKnown RBP18.95■□□□□ 0.62
RBM39-243ENST00000528062 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
RBM39-243ENST00000528062 FRMPD1Q5SYB0 1578 aa18.94■□□□□ 0.62
RBM39-243ENST00000528062 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
RBM39-243ENST00000528062 ARHGEF5Q12774 1597 aa18.94■□□□□ 0.62
RBM39-243ENST00000528062 TRAPPC8Q9Y2L5 1435 aa18.93■□□□□ 0.62
RBM39-243ENST00000528062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
RBM39-243ENST00000528062 SCAPERQ9BY12 1400 aa18.92■□□□□ 0.62
RBM39-243ENST00000528062 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
RBM39-243ENST00000528062 HNRNPMP52272 730 aaKnown RBP eCLIP18.91■□□□□ 0.62
RBM39-243ENST00000528062 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
RBM39-243ENST00000528062 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
RBM39-243ENST00000528062 ABCC5O15440 1437 aa18.9■□□□□ 0.62
RBM39-243ENST00000528062 POGZQ7Z3K3 1410 aa18.89■□□□□ 0.61
RBM39-243ENST00000528062 DAPK1P53355 1430 aa18.89■□□□□ 0.61
RBM39-243ENST00000528062 KDM5CP41229 1560 aa18.89■□□□□ 0.61
RBM39-243ENST00000528062 CCDC141Q6ZP82 1450 aa18.87■□□□□ 0.61
RBM39-243ENST00000528062 DENND4BO75064 1496 aaPredicted RBP18.86■□□□□ 0.61
RBM39-243ENST00000528062 ZNF518AQ6AHZ1 1483 aa18.85■□□□□ 0.61
RBM39-243ENST00000528062 RAPGEF3O95398 923 aa18.85■□□□□ 0.61
RBM39-243ENST00000528062 AFAP1Q8N556 730 aa18.85■□□□□ 0.61
RBM39-243ENST00000528062 KDM6BO15054 1643 aa18.85■□□□□ 0.61
RBM39-243ENST00000528062 INO80Q9ULG1 1556 aaPredicted RBP18.85■□□□□ 0.61
RBM39-243ENST00000528062 KIDINS220Q9ULH0 1771 aa18.83■□□□□ 0.61
RBM39-243ENST00000528062 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.61
RBM39-243ENST00000528062 ZFYVE16Q7Z3T8 1539 aa18.83■□□□□ 0.61
RBM39-243ENST00000528062 ZMYM4Q5VZL5 1548 aa18.83■□□□□ 0.6
RBM39-243ENST00000528062 SHANK2Q9UPX8 1470 aa18.82■□□□□ 0.6
RBM39-243ENST00000528062 ADGBQ8N7X0 1667 aa18.82■□□□□ 0.6
RBM39-243ENST00000528062 HECW2Q9P2P5 1572 aa18.81■□□□□ 0.6
RBM39-243ENST00000528062 ITGAEP38570 1179 aa18.81■□□□□ 0.6
RBM39-243ENST00000528062 C9orf84Q5VXU9 1444 aa18.8■□□□□ 0.6
RBM39-243ENST00000528062 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
RBM39-243ENST00000528062 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
RBM39-243ENST00000528062 ADGRL2O95490 1459 aa18.77■□□□□ 0.6
RBM39-243ENST00000528062 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
RBM39-243ENST00000528062 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
RBM39-243ENST00000528062 PLXNC1O60486 1568 aa18.77■□□□□ 0.59
RBM39-243ENST00000528062 CHIC2Q9UKJ5 165 aa18.76■□□□□ 0.59
RBM39-243ENST00000528062 YEATS2Q9ULM3 1422 aa18.75■□□□□ 0.59
RBM39-243ENST00000528062 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
RBM39-243ENST00000528062 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
RBM39-243ENST00000528062 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
RBM39-243ENST00000528062 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
RBM39-243ENST00000528062 SIGLEC1Q9BZZ2 1709 aa18.73■□□□□ 0.59
RBM39-243ENST00000528062 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
RBM39-243ENST00000528062 GCC2Q8IWJ2 1684 aa18.72■□□□□ 0.59
RBM39-243ENST00000528062 ARHGEF40Q8TER5 1519 aa18.72■□□□□ 0.59
RBM39-243ENST00000528062 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
RBM39-243ENST00000528062 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
RBM39-243ENST00000528062 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
RBM39-243ENST00000528062 MAGI2Q86UL8 1455 aa18.7■□□□□ 0.58
RBM39-243ENST00000528062 NAIPQ13075 1403 aa18.69■□□□□ 0.58
RBM39-243ENST00000528062 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
RBM39-243ENST00000528062 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
RBM39-243ENST00000528062 KIF15Q9NS87 1388 aa18.67■□□□□ 0.58
RBM39-243ENST00000528062 ANKRD30AQ9BXX3 1397 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms