RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 KIAA0556O60303 1618 aa10.4□□□□□ -0.75
LINC00534-204ENST00000524361 GLI2P10070 1586 aa10.38□□□□□ -0.75
LINC00534-204ENST00000524361 GOLGA3Q08378 1498 aa10.37□□□□□ -0.75
LINC00534-204ENST00000524361 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
LINC00534-204ENST00000524361 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
LINC00534-204ENST00000524361 WDR7Q9Y4E6 1490 aa10.36□□□□□ -0.75
LINC00534-204ENST00000524361 ZCCHC11Q5TAX3 1644 aaKnown RBP10.36□□□□□ -0.75
LINC00534-204ENST00000524361 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
LINC00534-204ENST00000524361 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
LINC00534-204ENST00000524361 ATP10BO94823 1461 aa10.33□□□□□ -0.76
LINC00534-204ENST00000524361 TEX14Q8IWB6 1497 aa10.33□□□□□ -0.76
LINC00534-204ENST00000524361 ABCA8O94911 1581 aa10.33□□□□□ -0.76
LINC00534-204ENST00000524361 PPRC1Q5VV67 1664 aaKnown RBP10.33□□□□□ -0.76
LINC00534-204ENST00000524361 HAX1O00165 279 aa10.32□□□□□ -0.76
LINC00534-204ENST00000524361 ADGRL1O94910 1474 aa10.31□□□□□ -0.76
LINC00534-204ENST00000524361 RAPGEF3O95398 923 aa10.31□□□□□ -0.76
LINC00534-204ENST00000524361 MAP3K4Q9Y6R4 1608 aa10.3□□□□□ -0.76
LINC00534-204ENST00000524361 EVX2Q03828 476 aa10.3□□□□□ -0.76
LINC00534-204ENST00000524361 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
LINC00534-204ENST00000524361 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
LINC00534-204ENST00000524361 FHOD3Q2V2M9 1422 aa10.28□□□□□ -0.76
LINC00534-204ENST00000524361 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
LINC00534-204ENST00000524361 CTTNBP2Q8WZ74 1663 aa10.28□□□□□ -0.76
LINC00534-204ENST00000524361 MAGI3Q5TCQ9 1506 aa10.28□□□□□ -0.76
LINC00534-204ENST00000524361 PLEKHD1A6NEE1 506 aa10.27□□□□□ -0.77
LINC00534-204ENST00000524361 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
LINC00534-204ENST00000524361 ARID4BQ4LE39 1312 aaPredicted RBP10.24□□□□□ -0.77
LINC00534-204ENST00000524361 EEA1Q15075 1411 aa10.24□□□□□ -0.77
LINC00534-204ENST00000524361 NUP153P49790 1475 aaKnown RBP10.23□□□□□ -0.77
LINC00534-204ENST00000524361 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
LINC00534-204ENST00000524361 SAMD9Q5K651 1589 aa10.2□□□□□ -0.78
LINC00534-204ENST00000524361 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
LINC00534-204ENST00000524361 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
LINC00534-204ENST00000524361 CFAP43Q8NDM7 1665 aa10.18□□□□□ -0.78
LINC00534-204ENST00000524361 RAPGEF6Q8TEU7 1601 aa10.18□□□□□ -0.78
LINC00534-204ENST00000524361 PHLDB1Q86UU1 1377 aa10.18□□□□□ -0.78
LINC00534-204ENST00000524361 MLECQ14165 292 aa10.17□□□□□ -0.78
LINC00534-204ENST00000524361 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
LINC00534-204ENST00000524361 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
LINC00534-204ENST00000524361 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.78
LINC00534-204ENST00000524361 NEO1Q92859 1461 aa10.15□□□□□ -0.78
LINC00534-204ENST00000524361 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
LINC00534-204ENST00000524361 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
LINC00534-204ENST00000524361 FANCAO15360 1455 aa10.13□□□□□ -0.79
LINC00534-204ENST00000524361 DENND4BO75064 1496 aaPredicted RBP10.13□□□□□ -0.79
LINC00534-204ENST00000524361 KIF21BO75037 1637 aa10.13□□□□□ -0.79
LINC00534-204ENST00000524361 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
LINC00534-204ENST00000524361 EFCAB2Q5VUJ9 269 aa10.12□□□□□ -0.79
LINC00534-204ENST00000524361 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
LINC00534-204ENST00000524361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■■□□ 14.8
LINC00534-204ENST00000524361 PTPRMP28827 1452 aa10.11□□□□□ -0.79
LINC00534-204ENST00000524361 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
LINC00534-204ENST00000524361 SCAPERQ9BY12 1400 aa10.11□□□□□ -0.79
LINC00534-204ENST00000524361 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
LINC00534-204ENST00000524361 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
LINC00534-204ENST00000524361 HSPA2P54652 639 aa10.1□□□□□ -0.79
LINC00534-204ENST00000524361 AFAP1Q8N556 730 aa10.1□□□□□ -0.79
LINC00534-204ENST00000524361 EFCAB5A4FU69 1503 aa10.1□□□□□ -0.79
LINC00534-204ENST00000524361 PLCH2O75038 1416 aa10.09□□□□□ -0.79
LINC00534-204ENST00000524361 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
LINC00534-204ENST00000524361 FMN1Q68DA7 1419 aa10.08□□□□□ -0.8
LINC00534-204ENST00000524361 CEBPAP49715 358 aaPredicted RBP10.07□□□□□ -0.8
LINC00534-204ENST00000524361 TTC37Q6PGP7 1564 aa10.06□□□□□ -0.8
LINC00534-204ENST00000524361 ZNF777Q9ULD5 760 aaPredicted RBP10.05□□□□□ -0.8
LINC00534-204ENST00000524361 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
LINC00534-204ENST00000524361 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
LINC00534-204ENST00000524361 TROQ12816 1431 aaPredicted RBP10.04□□□□□ -0.8
LINC00534-204ENST00000524361 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
LINC00534-204ENST00000524361 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.8
LINC00534-204ENST00000524361 MADDQ8WXG6 1647 aa10.02□□□□□ -0.81
LINC00534-204ENST00000524361 HECW1Q76N89 1606 aa10.01□□□□□ -0.81
LINC00534-204ENST00000524361 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
LINC00534-204ENST00000524361 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
LINC00534-204ENST00000524361 ATP10AO60312 1499 aa10.01□□□□□ -0.81
LINC00534-204ENST00000524361 BCORL1Q5H9F3 1711 aa10.01□□□□□ -0.81
LINC00534-204ENST00000524361 CLIP1P30622 1438 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 MAGI2Q86UL8 1455 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 LMTK3Q96Q04 1460 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 GABBR2O75899 941 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 HNRNPMP52272 730 aaKnown RBP eCLIP10□□□□□ -0.817e-8■■■■■ 27.6
LINC00534-204ENST00000524361 ARHGAP5Q13017 1502 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 ARHGEF40Q8TER5 1519 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 KIF14Q15058 1648 aa10□□□□□ -0.81
LINC00534-204ENST00000524361 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
LINC00534-204ENST00000524361 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
LINC00534-204ENST00000524361 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
LINC00534-204ENST00000524361 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
LINC00534-204ENST00000524361 SIGLEC1Q9BZZ2 1709 aa9.98□□□□□ -0.81
LINC00534-204ENST00000524361 C9orf84Q5VXU9 1444 aa9.98□□□□□ -0.81
LINC00534-204ENST00000524361 ZMYM4Q5VZL5 1548 aa9.97□□□□□ -0.81
LINC00534-204ENST00000524361 PCF11O94913 1555 aaKnown RBP9.97□□□□□ -0.81
LINC00534-204ENST00000524361 CFAP74Q9C0B2 1584 aa9.97□□□□□ -0.81
LINC00534-204ENST00000524361 RIMS1Q86UR5 1692 aaKnown RBP9.97□□□□□ -0.81
LINC00534-204ENST00000524361 ESF1Q9H501 851 aaKnown RBP9.97□□□□□ -0.81
LINC00534-204ENST00000524361 ARHGEF12Q9NZN5 1544 aa9.97□□□□□ -0.81
LINC00534-204ENST00000524361 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
LINC00534-204ENST00000524361 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
LINC00534-204ENST00000524361 ZNF518AQ6AHZ1 1483 aa9.95□□□□□ -0.82
LINC00534-204ENST00000524361 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
LINC00534-204ENST00000524361 LOC105371045A0A1W2PR82 267 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms