RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.82□□□□□ -0.52
CSMD1-212ENST00000523387 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
CSMD1-212ENST00000523387 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
CSMD1-212ENST00000523387 WDR43Q15061 677 aaKnown RBP eCLIP11.81□□□□□ -0.52
CSMD1-212ENST00000523387 NAIPQ13075 1403 aa11.81□□□□□ -0.52
CSMD1-212ENST00000523387 CC2D1BQ5T0F9 858 aaKnown RBP11.81□□□□□ -0.52
CSMD1-212ENST00000523387 FYCO1Q9BQS8 1478 aa11.8□□□□□ -0.52
CSMD1-212ENST00000523387 RALBP1Q15311 655 aa11.79□□□□□ -0.52
CSMD1-212ENST00000523387 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
CSMD1-212ENST00000523387 PEG3Q9GZU2 1588 aa11.79□□□□□ -0.52
CSMD1-212ENST00000523387 NFKBIBQ15653 356 aa11.79□□□□□ -0.52
CSMD1-212ENST00000523387 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
CSMD1-212ENST00000523387 USP47Q96K76 1375 aa11.79□□□□□ -0.52
CSMD1-212ENST00000523387 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
CSMD1-212ENST00000523387 FGD5Q6ZNL6 1462 aa11.78□□□□□ -0.52
CSMD1-212ENST00000523387 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
CSMD1-212ENST00000523387 PKD2Q13563 968 aa11.78□□□□□ -0.52
CSMD1-212ENST00000523387 NCOA2Q15596 1464 aa11.78□□□□□ -0.52
CSMD1-212ENST00000523387 BECN1Q14457 450 aa11.78□□□□□ -0.52
CSMD1-212ENST00000523387 PDE3BQ13370 1112 aa11.77□□□□□ -0.52
CSMD1-212ENST00000523387 CRBNQ96SW2 442 aa11.77□□□□□ -0.52
CSMD1-212ENST00000523387 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
CSMD1-212ENST00000523387 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
CSMD1-212ENST00000523387 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
CSMD1-212ENST00000523387 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
CSMD1-212ENST00000523387 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.53
CSMD1-212ENST00000523387 KIF15Q9NS87 1388 aa11.76□□□□□ -0.53
CSMD1-212ENST00000523387 NLRP13Q86W25 1043 aa11.76□□□□□ -0.53
CSMD1-212ENST00000523387 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
CSMD1-212ENST00000523387 NCOA1Q15788 1441 aa11.76□□□□□ -0.53
CSMD1-212ENST00000523387 KTN1Q86UP2 1357 aaKnown RBP11.75□□□□□ -0.53
CSMD1-212ENST00000523387 ROCK2O75116 1388 aaKnown RBP11.75□□□□□ -0.53
CSMD1-212ENST00000523387 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
CSMD1-212ENST00000523387 PTPRKQ15262 1439 aa11.74□□□□□ -0.53
CSMD1-212ENST00000523387 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
CSMD1-212ENST00000523387 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
CSMD1-212ENST00000523387 CFTRP13569 1480 aa11.74□□□□□ -0.53
CSMD1-212ENST00000523387 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSMD1-212ENST00000523387 TSPY4P0CV99 314 aa11.73□□□□□ -0.53
CSMD1-212ENST00000523387 TSPY10P0CW01 314 aa11.73□□□□□ -0.53
CSMD1-212ENST00000523387 SLKQ9H2G2 1235 aaPredicted RBP11.73□□□□□ -0.53
CSMD1-212ENST00000523387 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
CSMD1-212ENST00000523387 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
CSMD1-212ENST00000523387 SKAP1Q86WV1 359 aa11.72□□□□□ -0.53
CSMD1-212ENST00000523387 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
CSMD1-212ENST00000523387 PTPN23Q9H3S7 1636 aa11.72□□□□□ -0.53
CSMD1-212ENST00000523387 FAM161AQ3B820 660 aa11.71□□□□□ -0.53
CSMD1-212ENST00000523387 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
CSMD1-212ENST00000523387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.54
CSMD1-212ENST00000523387 UNC13AQ9UPW8 1703 aa11.71□□□□□ -0.54
CSMD1-212ENST00000523387 RAD54L2Q9Y4B4 1467 aa11.69□□□□□ -0.54
CSMD1-212ENST00000523387 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
CSMD1-212ENST00000523387 FRAT2O75474 233 aaPredicted RBP11.69□□□□□ -0.54
CSMD1-212ENST00000523387 CENPQQ7L2Z9 268 aaPredicted RBP11.69□□□□□ -0.54
CSMD1-212ENST00000523387 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
CSMD1-212ENST00000523387 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
CSMD1-212ENST00000523387 BRD4O60885 1362 aaPredicted RBP11.68□□□□□ -0.54
CSMD1-212ENST00000523387 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
CSMD1-212ENST00000523387 FBLN2P98095 1184 aa11.68□□□□□ -0.54
CSMD1-212ENST00000523387 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
CSMD1-212ENST00000523387 ARID4BQ4LE39 1312 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-212ENST00000523387 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
CSMD1-212ENST00000523387 NUP155O75694 1391 aa11.65□□□□□ -0.54
CSMD1-212ENST00000523387 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
CSMD1-212ENST00000523387 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.55
CSMD1-212ENST00000523387 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
CSMD1-212ENST00000523387 ANKRD30BQ9BXX2 1392 aa11.64□□□□□ -0.55
CSMD1-212ENST00000523387 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-212ENST00000523387 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
CSMD1-212ENST00000523387 TMF1P82094 1093 aa11.63□□□□□ -0.55
CSMD1-212ENST00000523387 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
CSMD1-212ENST00000523387 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
CSMD1-212ENST00000523387 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
CSMD1-212ENST00000523387 EHBP1L1Q8N3D4 1523 aa11.61□□□□□ -0.55
CSMD1-212ENST00000523387 ANP32BQ92688 251 aaKnown RBP11.61□□□□□ -0.55
CSMD1-212ENST00000523387 MIA2Q96PC5 1412 aa11.61□□□□□ -0.55
CSMD1-212ENST00000523387 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
CSMD1-212ENST00000523387 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
CSMD1-212ENST00000523387 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
CSMD1-212ENST00000523387 PANK3Q9H999 370 aa11.61□□□□□ -0.55
CSMD1-212ENST00000523387 UBE2Q2Q8WVN8 375 aa11.6□□□□□ -0.55
CSMD1-212ENST00000523387 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
CSMD1-212ENST00000523387 GOLGA6L3A6NEY3 463 aa11.6□□□□□ -0.55
CSMD1-212ENST00000523387 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
CSMD1-212ENST00000523387 RPRD2Q5VT52 1461 aaKnown RBP11.6□□□□□ -0.55
CSMD1-212ENST00000523387 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
CSMD1-212ENST00000523387 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
CSMD1-212ENST00000523387 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
CSMD1-212ENST00000523387 PLEKHD1A6NEE1 506 aa11.58□□□□□ -0.56
CSMD1-212ENST00000523387 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
CSMD1-212ENST00000523387 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
CSMD1-212ENST00000523387 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
CSMD1-212ENST00000523387 HSP90AA2PQ14568 343 aaPredicted RBP11.55□□□□□ -0.56
CSMD1-212ENST00000523387 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
CSMD1-212ENST00000523387 POGKQ9P215 609 aa11.55□□□□□ -0.56
CSMD1-212ENST00000523387 DAPK1P53355 1430 aa11.53□□□□□ -0.56
CSMD1-212ENST00000523387 KIAA1107Q9UPP5 1409 aa11.53□□□□□ -0.56
CSMD1-212ENST00000523387 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
CSMD1-212ENST00000523387 COG6Q9Y2V7 657 aa11.52□□□□□ -0.56
CSMD1-212ENST00000523387 HSCBQ8IWL3 235 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms