RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
MRPS28-205ENST00000519386 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-205ENST00000519386 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
MRPS28-205ENST00000519386 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
MRPS28-205ENST00000519386 ABCC10Q5T3U5 1492 aa11.2□□□□□ -0.62
MRPS28-205ENST00000519386 CASKIN1Q8WXD9 1431 aa11.2□□□□□ -0.62
MRPS28-205ENST00000519386 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
MRPS28-205ENST00000519386 WDR7Q9Y4E6 1490 aa11.19□□□□□ -0.62
MRPS28-205ENST00000519386 LRRIQ1Q96JM4 1722 aa11.19□□□□□ -0.62
MRPS28-205ENST00000519386 EPRSP07814 1512 aaKnown RBP11.19□□□□□ -0.62
MRPS28-205ENST00000519386 FAM69CQ0P6D2 419 aa11.18□□□□□ -0.62
MRPS28-205ENST00000519386 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-205ENST00000519386 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
MRPS28-205ENST00000519386 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
MRPS28-205ENST00000519386 GLI2P10070 1586 aa11.14□□□□□ -0.63
MRPS28-205ENST00000519386 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
MRPS28-205ENST00000519386 TSPOAP1O95153 1857 aa11.13□□□□□ -0.63
MRPS28-205ENST00000519386 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
MRPS28-205ENST00000519386 MAP3K4Q9Y6R4 1608 aa11.11□□□□□ -0.63
MRPS28-205ENST00000519386 CDK11AQ9UQ88 783 aaPredicted RBP11.1□□□□□ -0.63
MRPS28-205ENST00000519386 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
MRPS28-205ENST00000519386 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
MRPS28-205ENST00000519386 PPRC1Q5VV67 1664 aaKnown RBP11.09□□□□□ -0.63
MRPS28-205ENST00000519386 ABCA9Q8IUA7 1624 aa11.09□□□□□ -0.63
MRPS28-205ENST00000519386 KIF14Q15058 1648 aa11.08□□□□□ -0.64
MRPS28-205ENST00000519386 CD109Q6YHK3 1445 aa11.08□□□□□ -0.64
MRPS28-205ENST00000519386 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
MRPS28-205ENST00000519386 LRRC9Q6ZRR7 1453 aa11.07□□□□□ -0.64
MRPS28-205ENST00000519386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
MRPS28-205ENST00000519386 EHBP1L1Q8N3D4 1523 aa11.06□□□□□ -0.64
MRPS28-205ENST00000519386 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
MRPS28-205ENST00000519386 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
MRPS28-205ENST00000519386 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
MRPS28-205ENST00000519386 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
MRPS28-205ENST00000519386 TEX14Q8IWB6 1497 aa11.03□□□□□ -0.64
MRPS28-205ENST00000519386 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
MRPS28-205ENST00000519386 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
MRPS28-205ENST00000519386 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
MRPS28-205ENST00000519386 MYO5CQ9NQX4 1742 aa11.01□□□□□ -0.65
MRPS28-205ENST00000519386 HRCP23327 699 aa11□□□□□ -0.65
MRPS28-205ENST00000519386 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
MRPS28-205ENST00000519386 PLCH2O75038 1416 aa11□□□□□ -0.65
MRPS28-205ENST00000519386 KDM6BO15054 1643 aa10.99□□□□□ -0.65
MRPS28-205ENST00000519386 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
MRPS28-205ENST00000519386 FANCAO15360 1455 aa10.98□□□□□ -0.65
MRPS28-205ENST00000519386 NEO1Q92859 1461 aa10.98□□□□□ -0.65
MRPS28-205ENST00000519386 COL17A1Q9UMD9 1497 aaPredicted RBP10.98□□□□□ -0.65
MRPS28-205ENST00000519386 PREX2Q70Z35 1606 aa10.98□□□□□ -0.65
MRPS28-205ENST00000519386 CDC42BPBQ9Y5S2 1711 aa10.98□□□□□ -0.65
MRPS28-205ENST00000519386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.97□□□□□ -0.65
MRPS28-205ENST00000519386 ARHGAP5Q13017 1502 aa10.97□□□□□ -0.65
MRPS28-205ENST00000519386 ARAP3Q8WWN8 1544 aa10.97□□□□□ -0.65
MRPS28-205ENST00000519386 CFAP74Q9C0B2 1584 aa10.96□□□□□ -0.65
MRPS28-205ENST00000519386 GPATCH8Q9UKJ3 1502 aaKnown RBP10.96□□□□□ -0.65
MRPS28-205ENST00000519386 NCOA2Q15596 1464 aa10.96□□□□□ -0.65
MRPS28-205ENST00000519386 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
MRPS28-205ENST00000519386 PPARGC1BQ86YN6 1023 aaKnown RBP10.96□□□□□ -0.65
MRPS28-205ENST00000519386 AKNAQ7Z591 1439 aa10.95□□□□□ -0.66
MRPS28-205ENST00000519386 PHLDB1Q86UU1 1377 aa10.95□□□□□ -0.66
MRPS28-205ENST00000519386 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
MRPS28-205ENST00000519386 ITSN2Q9NZM3 1697 aa10.94□□□□□ -0.66
MRPS28-205ENST00000519386 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
MRPS28-205ENST00000519386 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
MRPS28-205ENST00000519386 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
MRPS28-205ENST00000519386 REM2Q8IYK8 340 aaPredicted RBP10.92□□□□□ -0.66
MRPS28-205ENST00000519386 FRMPD1Q5SYB0 1578 aa10.91□□□□□ -0.66
MRPS28-205ENST00000519386 SAMD9LQ8IVG5 1584 aa10.91□□□□□ -0.66
MRPS28-205ENST00000519386 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
MRPS28-205ENST00000519386 CFDP1Q9UEE9 299 aaPredicted RBP10.91□□□□□ -0.66
MRPS28-205ENST00000519386 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
MRPS28-205ENST00000519386 DENND4BO75064 1496 aaPredicted RBP10.91□□□□□ -0.66
MRPS28-205ENST00000519386 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
MRPS28-205ENST00000519386 ABCC1P33527 1531 aa10.9□□□□□ -0.66
MRPS28-205ENST00000519386 RICTORQ6R327 1708 aa10.9□□□□□ -0.66
MRPS28-205ENST00000519386 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
MRPS28-205ENST00000519386 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
MRPS28-205ENST00000519386 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.66
MRPS28-205ENST00000519386 POGZQ7Z3K3 1410 aa10.89□□□□□ -0.67
MRPS28-205ENST00000519386 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
MRPS28-205ENST00000519386 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
MRPS28-205ENST00000519386 TCOF1Q13428 1488 aaKnown RBP10.88□□□□□ -0.67
MRPS28-205ENST00000519386 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
MRPS28-205ENST00000519386 SYCP2Q9BX26 1530 aa10.88□□□□□ -0.67
MRPS28-205ENST00000519386 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
MRPS28-205ENST00000519386 CAMSAP2Q08AD1 1489 aa10.87□□□□□ -0.67
MRPS28-205ENST00000519386 PLEKHH2Q8IVE3 1493 aa10.87□□□□□ -0.67
MRPS28-205ENST00000519386 TRAPPC8Q9Y2L5 1435 aa10.86□□□□□ -0.67
MRPS28-205ENST00000519386 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
MRPS28-205ENST00000519386 GCC2Q8IWJ2 1684 aa10.85□□□□□ -0.67
MRPS28-205ENST00000519386 KIAA1107Q9UPP5 1409 aa10.85□□□□□ -0.67
MRPS28-205ENST00000519386 ZMYM4Q5VZL5 1548 aa10.85□□□□□ -0.67
MRPS28-205ENST00000519386 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
MRPS28-205ENST00000519386 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
MRPS28-205ENST00000519386 AFAP1Q8N556 730 aa10.85□□□□□ -0.67
MRPS28-205ENST00000519386 KDM5CP41229 1560 aa10.84□□□□□ -0.67
MRPS28-205ENST00000519386 ARHGEF40Q8TER5 1519 aa10.83□□□□□ -0.68
MRPS28-205ENST00000519386 YEATS2Q9ULM3 1422 aa10.83□□□□□ -0.68
MRPS28-205ENST00000519386 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
MRPS28-205ENST00000519386 MBD5Q9P267 1494 aa10.82□□□□□ -0.68
MRPS28-205ENST00000519386 ZFYVE16Q7Z3T8 1539 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms