RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 HECW1Q76N89 1606 aa17.03■□□□□ 0.32
SMAD1-215ENST00000515385 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
SMAD1-215ENST00000515385 NFKBIBQ15653 356 aa16.99■□□□□ 0.31
SMAD1-215ENST00000515385 RRP1P56182 461 aaKnown RBP16.98■□□□□ 0.31
SMAD1-215ENST00000515385 SPATA31E1Q6ZUB1 1445 aa16.98■□□□□ 0.31
SMAD1-215ENST00000515385 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
SMAD1-215ENST00000515385 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.3
SMAD1-215ENST00000515385 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMAD1-215ENST00000515385 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
SMAD1-215ENST00000515385 L3MBTL2Q969R5 705 aa16.95■□□□□ 0.3
SMAD1-215ENST00000515385 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
SMAD1-215ENST00000515385 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
SMAD1-215ENST00000515385 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
SMAD1-215ENST00000515385 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
SMAD1-215ENST00000515385 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
SMAD1-215ENST00000515385 CFTRP13569 1480 aa16.93■□□□□ 0.3
SMAD1-215ENST00000515385 DENND4BO75064 1496 aaPredicted RBP16.92■□□□□ 0.3
SMAD1-215ENST00000515385 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
SMAD1-215ENST00000515385 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
SMAD1-215ENST00000515385 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
SMAD1-215ENST00000515385 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
SMAD1-215ENST00000515385 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
SMAD1-215ENST00000515385 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
SMAD1-215ENST00000515385 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.29
SMAD1-215ENST00000515385 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
SMAD1-215ENST00000515385 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
SMAD1-215ENST00000515385 RPRD2Q5VT52 1461 aaKnown RBP16.88■□□□□ 0.29
SMAD1-215ENST00000515385 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
SMAD1-215ENST00000515385 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
SMAD1-215ENST00000515385 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
SMAD1-215ENST00000515385 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
SMAD1-215ENST00000515385 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
SMAD1-215ENST00000515385 SUPT6HQ7KZ85 1726 aaKnown RBP16.85■□□□□ 0.29
SMAD1-215ENST00000515385 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
SMAD1-215ENST00000515385 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
SMAD1-215ENST00000515385 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
SMAD1-215ENST00000515385 EHBP1L1Q8N3D4 1523 aa16.85■□□□□ 0.29
SMAD1-215ENST00000515385 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
SMAD1-215ENST00000515385 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
SMAD1-215ENST00000515385 NBPF8Q3BBV2 869 aa16.84■□□□□ 0.29
SMAD1-215ENST00000515385 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
SMAD1-215ENST00000515385 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
SMAD1-215ENST00000515385 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
SMAD1-215ENST00000515385 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
SMAD1-215ENST00000515385 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
SMAD1-215ENST00000515385 L1TD1Q5T7N2 865 aaKnown RBP16.79■□□□□ 0.28
SMAD1-215ENST00000515385 RRP7BPQ9NSQ0 103 aa16.79■□□□□ 0.28
SMAD1-215ENST00000515385 RALBP1Q15311 655 aa16.78■□□□□ 0.28
SMAD1-215ENST00000515385 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.27
SMAD1-215ENST00000515385 INSRP06213 1382 aa16.76■□□□□ 0.27
SMAD1-215ENST00000515385 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
SMAD1-215ENST00000515385 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
SMAD1-215ENST00000515385 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
SMAD1-215ENST00000515385 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
SMAD1-215ENST00000515385 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
SMAD1-215ENST00000515385 USP47Q96K76 1375 aa16.73■□□□□ 0.27
SMAD1-215ENST00000515385 RRP9O43818 475 aaKnown RBP16.73■□□□□ 0.27
SMAD1-215ENST00000515385 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
SMAD1-215ENST00000515385 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
SMAD1-215ENST00000515385 KDM6BO15054 1643 aa16.72■□□□□ 0.27
SMAD1-215ENST00000515385 ZMYM4Q5VZL5 1548 aa16.72■□□□□ 0.27
SMAD1-215ENST00000515385 CUL7Q14999 1698 aa16.71■□□□□ 0.27
SMAD1-215ENST00000515385 ROCK1Q13464 1354 aa16.71■□□□□ 0.27
SMAD1-215ENST00000515385 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
SMAD1-215ENST00000515385 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
SMAD1-215ENST00000515385 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
SMAD1-215ENST00000515385 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
SMAD1-215ENST00000515385 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
SMAD1-215ENST00000515385 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
SMAD1-215ENST00000515385 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
SMAD1-215ENST00000515385 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
SMAD1-215ENST00000515385 RRAGDQ9NQL2 400 aaPredicted RBP16.68■□□□□ 0.26
SMAD1-215ENST00000515385 KDM5CP41229 1560 aa16.67■□□□□ 0.26
SMAD1-215ENST00000515385 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
SMAD1-215ENST00000515385 KIF14Q15058 1648 aa16.67■□□□□ 0.26
SMAD1-215ENST00000515385 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
SMAD1-215ENST00000515385 LRRIQ1Q96JM4 1722 aa16.66■□□□□ 0.26
SMAD1-215ENST00000515385 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
SMAD1-215ENST00000515385 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
SMAD1-215ENST00000515385 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
SMAD1-215ENST00000515385 FOXD1Q16676 465 aa16.65■□□□□ 0.26
SMAD1-215ENST00000515385 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
SMAD1-215ENST00000515385 CLCN1P35523 988 aa16.63■□□□□ 0.25
SMAD1-215ENST00000515385 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
SMAD1-215ENST00000515385 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
SMAD1-215ENST00000515385 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
SMAD1-215ENST00000515385 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
SMAD1-215ENST00000515385 UHRF1BP1Q6BDS2 1440 aa16.61■□□□□ 0.25
SMAD1-215ENST00000515385 BECN1Q14457 450 aa16.61■□□□□ 0.25
SMAD1-215ENST00000515385 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
SMAD1-215ENST00000515385 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
SMAD1-215ENST00000515385 FGD1P98174 961 aa16.6■□□□□ 0.25
SMAD1-215ENST00000515385 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
SMAD1-215ENST00000515385 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
SMAD1-215ENST00000515385 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
SMAD1-215ENST00000515385 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
SMAD1-215ENST00000515385 PLIN1O60240 522 aa16.58■□□□□ 0.24
SMAD1-215ENST00000515385 POGKQ9P215 609 aa16.58■□□□□ 0.24
SMAD1-215ENST00000515385 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
SMAD1-215ENST00000515385 E9PCH4 1651 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms