RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
GYPB-213ENST00000513128 ADAMTSL3P82987 1691 aa9.9□□□□□ -0.82
GYPB-213ENST00000513128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.89□□□□□ -0.83
GYPB-213ENST00000513128 HNRNPUL2Q1KMD3 747 aaKnown RBP9.89□□□□□ -0.83
GYPB-213ENST00000513128 NEO1Q92859 1461 aa9.88□□□□□ -0.83
GYPB-213ENST00000513128 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
GYPB-213ENST00000513128 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
GYPB-213ENST00000513128 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
GYPB-213ENST00000513128 EEA1Q15075 1411 aa9.87□□□□□ -0.83
GYPB-213ENST00000513128 BCORL1Q5H9F3 1711 aa9.87□□□□□ -0.83
GYPB-213ENST00000513128 PHLDB1Q86UU1 1377 aa9.87□□□□□ -0.83
GYPB-213ENST00000513128 PTPRMP28827 1452 aa9.86□□□□□ -0.83
GYPB-213ENST00000513128 TTC37Q6PGP7 1564 aa9.86□□□□□ -0.83
GYPB-213ENST00000513128 SIGLEC1Q9BZZ2 1709 aa9.86□□□□□ -0.83
GYPB-213ENST00000513128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.86□□□□□ -0.83
GYPB-213ENST00000513128 MADDQ8WXG6 1647 aa9.85□□□□□ -0.83
GYPB-213ENST00000513128 CDK13Q14004 1512 aaKnown RBP9.85□□□□□ -0.83
GYPB-213ENST00000513128 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
GYPB-213ENST00000513128 VASPP50552 380 aaPredicted RBP9.84□□□□□ -0.83
GYPB-213ENST00000513128 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
GYPB-213ENST00000513128 ARHGEF40Q8TER5 1519 aa9.83□□□□□ -0.84
GYPB-213ENST00000513128 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
GYPB-213ENST00000513128 FANCAO15360 1455 aa9.83□□□□□ -0.84
GYPB-213ENST00000513128 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
GYPB-213ENST00000513128 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
GYPB-213ENST00000513128 RIMS1Q86UR5 1692 aaKnown RBP9.82□□□□□ -0.84
GYPB-213ENST00000513128 CFAP74Q9C0B2 1584 aa9.81□□□□□ -0.84
GYPB-213ENST00000513128 DENND4BO75064 1496 aaPredicted RBP9.81□□□□□ -0.84
GYPB-213ENST00000513128 PKD2Q13563 968 aa9.81□□□□□ -0.84
GYPB-213ENST00000513128 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
GYPB-213ENST00000513128 ARID4BQ4LE39 1312 aaPredicted RBP9.81□□□□□ -0.84
GYPB-213ENST00000513128 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
GYPB-213ENST00000513128 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
GYPB-213ENST00000513128 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
GYPB-213ENST00000513128 U3KPZ7 1027 aaPredicted RBP9.8□□□□□ -0.84
GYPB-213ENST00000513128 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
GYPB-213ENST00000513128 YEATS2Q9ULM3 1422 aa9.8□□□□□ -0.84
GYPB-213ENST00000513128 LMTK3Q96Q04 1460 aa9.79□□□□□ -0.84
GYPB-213ENST00000513128 HECW1Q76N89 1606 aa9.79□□□□□ -0.84
GYPB-213ENST00000513128 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
GYPB-213ENST00000513128 KIF14Q15058 1648 aa9.78□□□□□ -0.84
GYPB-213ENST00000513128 PROM2Q8N271 834 aa9.78□□□□□ -0.84
GYPB-213ENST00000513128 PCF11O94913 1555 aaKnown RBP9.78□□□□□ -0.84
GYPB-213ENST00000513128 ZFYVE16Q7Z3T8 1539 aa9.77□□□□□ -0.84
GYPB-213ENST00000513128 MYO5CQ9NQX4 1742 aa9.77□□□□□ -0.85
GYPB-213ENST00000513128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
GYPB-213ENST00000513128 PLCH2O75038 1416 aa9.76□□□□□ -0.85
GYPB-213ENST00000513128 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
GYPB-213ENST00000513128 ZNF219Q9P2Y4 722 aaPredicted RBP9.76□□□□□ -0.85
GYPB-213ENST00000513128 POGZQ7Z3K3 1410 aa9.75□□□□□ -0.85
GYPB-213ENST00000513128 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
GYPB-213ENST00000513128 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
GYPB-213ENST00000513128 FER1L4A9Z1Z3 1794 aa9.75□□□□□ -0.85
GYPB-213ENST00000513128 HSPA2P54652 639 aa9.74□□□□□ -0.85
GYPB-213ENST00000513128 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
GYPB-213ENST00000513128 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
GYPB-213ENST00000513128 MKRN4PQ13434 485 aaPredicted RBP9.73□□□□□ -0.85
GYPB-213ENST00000513128 MLECQ14165 292 aa9.73□□□□□ -0.85
GYPB-213ENST00000513128 CDC42BPBQ9Y5S2 1711 aa9.72□□□□□ -0.85
GYPB-213ENST00000513128 FBXO41Q8TF61 875 aa9.71□□□□□ -0.86
GYPB-213ENST00000513128 TROQ12816 1431 aaPredicted RBP9.71□□□□□ -0.86
GYPB-213ENST00000513128 ARHGEF12Q9NZN5 1544 aa9.71□□□□□ -0.86
GYPB-213ENST00000513128 DCAF8L1A6NGE4 600 aa9.7□□□□□ -0.86
GYPB-213ENST00000513128 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
GYPB-213ENST00000513128 ATP10AO60312 1499 aa9.7□□□□□ -0.86
GYPB-213ENST00000513128 ARHGAP5Q13017 1502 aa9.7□□□□□ -0.86
GYPB-213ENST00000513128 KDM5CP41229 1560 aa9.7□□□□□ -0.86
GYPB-213ENST00000513128 C9orf84Q5VXU9 1444 aa9.69□□□□□ -0.86
GYPB-213ENST00000513128 AFAP1Q8N556 730 aa9.69□□□□□ -0.86
GYPB-213ENST00000513128 DIP2CQ9Y2E4 1556 aa9.68□□□□□ -0.86
GYPB-213ENST00000513128 CEBPAP49715 358 aaPredicted RBP9.68□□□□□ -0.86
GYPB-213ENST00000513128 CDC42BPAQ5VT25 1732 aa9.68□□□□□ -0.86
GYPB-213ENST00000513128 PREX2Q70Z35 1606 aa9.67□□□□□ -0.86
GYPB-213ENST00000513128 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
GYPB-213ENST00000513128 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
GYPB-213ENST00000513128 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
GYPB-213ENST00000513128 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
GYPB-213ENST00000513128 ITSN2Q9NZM3 1697 aa9.66□□□□□ -0.86
GYPB-213ENST00000513128 ABCC1P33527 1531 aa9.66□□□□□ -0.86
GYPB-213ENST00000513128 CLIP1P30622 1438 aa9.65□□□□□ -0.86
GYPB-213ENST00000513128 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
GYPB-213ENST00000513128 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
GYPB-213ENST00000513128 STRCQ7RTU9 1775 aa9.65□□□□□ -0.86
GYPB-213ENST00000513128 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
GYPB-213ENST00000513128 C3P01024 1663 aa9.64□□□□□ -0.87
GYPB-213ENST00000513128 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
GYPB-213ENST00000513128 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
GYPB-213ENST00000513128 KIDINS220Q9ULH0 1771 aa9.64□□□□□ -0.87
GYPB-213ENST00000513128 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
GYPB-213ENST00000513128 MLH3Q9UHC1 1453 aa9.63□□□□□ -0.87
GYPB-213ENST00000513128 CFAP44Q96MT7 982 aa9.62□□□□□ -0.87
GYPB-213ENST00000513128 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
GYPB-213ENST00000513128 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
GYPB-213ENST00000513128 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
GYPB-213ENST00000513128 FYCO1Q9BQS8 1478 aa9.6□□□□□ -0.87
GYPB-213ENST00000513128 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
GYPB-213ENST00000513128 AGLP35573 1532 aa9.6□□□□□ -0.87
GYPB-213ENST00000513128 SYCP2Q9BX26 1530 aa9.59□□□□□ -0.87
GYPB-213ENST00000513128 GPATCH8Q9UKJ3 1502 aaKnown RBP9.59□□□□□ -0.87
GYPB-213ENST00000513128 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms