RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.07
GYPB-213ENST00000513128 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
GYPB-213ENST00000513128 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
GYPB-213ENST00000513128 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
GYPB-213ENST00000513128 ABCC9O60706 1549 aa13.46□□□□□ -0.25
GYPB-213ENST00000513128 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
GYPB-213ENST00000513128 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
GYPB-213ENST00000513128 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
GYPB-213ENST00000513128 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
GYPB-213ENST00000513128 NACADO15069 1562 aa12.64□□□□□ -0.39
GYPB-213ENST00000513128 DCAF8L2P0C7V8 631 aa12.57□□□□□ -0.4
GYPB-213ENST00000513128 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
GYPB-213ENST00000513128 SENP3Q9H4L4 574 aaPredicted RBP12.53□□□□□ -0.4
GYPB-213ENST00000513128 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
GYPB-213ENST00000513128 BICRAQ9NZM4 1560 aa12.44□□□□□ -0.42
GYPB-213ENST00000513128 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
GYPB-213ENST00000513128 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
GYPB-213ENST00000513128 ZCCHC6Q5VYS8 1495 aaKnown RBP12.33□□□□□ -0.44
GYPB-213ENST00000513128 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
GYPB-213ENST00000513128 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
GYPB-213ENST00000513128 KCNA4P22459 653 aa12.21□□□□□ -0.45
GYPB-213ENST00000513128 ADRA2BP18089 450 aa12.19□□□□□ -0.46
GYPB-213ENST00000513128 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
GYPB-213ENST00000513128 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
GYPB-213ENST00000513128 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
GYPB-213ENST00000513128 CECR2Q9BXF3 1484 aa12.1□□□□□ -0.47
GYPB-213ENST00000513128 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
GYPB-213ENST00000513128 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
GYPB-213ENST00000513128 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
GYPB-213ENST00000513128 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
GYPB-213ENST00000513128 FOXD1Q16676 465 aa11.66□□□□□ -0.54
GYPB-213ENST00000513128 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
GYPB-213ENST00000513128 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
GYPB-213ENST00000513128 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
GYPB-213ENST00000513128 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
GYPB-213ENST00000513128 SMARCA2P51531 1590 aa11.58□□□□□ -0.56
GYPB-213ENST00000513128 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
GYPB-213ENST00000513128 NESP48681 1621 aa11.57□□□□□ -0.56
GYPB-213ENST00000513128 CUX2O14529 1486 aa11.56□□□□□ -0.56
GYPB-213ENST00000513128 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
GYPB-213ENST00000513128 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
GYPB-213ENST00000513128 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
GYPB-213ENST00000513128 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
GYPB-213ENST00000513128 PPP4R3CPQ6ZMV5 832 aa11.49□□□□□ -0.57
GYPB-213ENST00000513128 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
GYPB-213ENST00000513128 KIF21AQ7Z4S6 1674 aa11.43□□□□□ -0.58
GYPB-213ENST00000513128 LAMC3Q9Y6N6 1575 aa11.41□□□□□ -0.58
GYPB-213ENST00000513128 WIZO95785 1651 aa11.37□□□□□ -0.59
GYPB-213ENST00000513128 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
GYPB-213ENST00000513128 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
GYPB-213ENST00000513128 ZBTB22O15209 634 aa11.31□□□□□ -0.6
GYPB-213ENST00000513128 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
GYPB-213ENST00000513128 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
GYPB-213ENST00000513128 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
GYPB-213ENST00000513128 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
GYPB-213ENST00000513128 WDR62O43379 1518 aa11.25□□□□□ -0.61
GYPB-213ENST00000513128 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
GYPB-213ENST00000513128 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
GYPB-213ENST00000513128 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
GYPB-213ENST00000513128 CFTRP13569 1480 aa11.19□□□□□ -0.62
GYPB-213ENST00000513128 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
GYPB-213ENST00000513128 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
GYPB-213ENST00000513128 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
GYPB-213ENST00000513128 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
GYPB-213ENST00000513128 TRIM41Q8WV44 630 aa11.12□□□□□ -0.63
GYPB-213ENST00000513128 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
GYPB-213ENST00000513128 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
GYPB-213ENST00000513128 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
GYPB-213ENST00000513128 OSCARQ8IYS5 282 aa11.02□□□□□ -0.65
GYPB-213ENST00000513128 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
GYPB-213ENST00000513128 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
GYPB-213ENST00000513128 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
GYPB-213ENST00000513128 RIMBP3CA6NJZ7 1639 aa10.95□□□□□ -0.66
GYPB-213ENST00000513128 RIMBP3BA6NNM3 1639 aa10.95□□□□□ -0.66
GYPB-213ENST00000513128 RIMBP3Q9UFD9 1639 aa10.95□□□□□ -0.66
GYPB-213ENST00000513128 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
GYPB-213ENST00000513128 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
GYPB-213ENST00000513128 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
GYPB-213ENST00000513128 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
GYPB-213ENST00000513128 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
GYPB-213ENST00000513128 CHD1O14646 1710 aa10.9□□□□□ -0.66
GYPB-213ENST00000513128 ABCC8Q09428 1581 aa10.9□□□□□ -0.67
GYPB-213ENST00000513128 AQRO60306 1485 aaKnown RBP eCLIP10.89□□□□□ -0.67
GYPB-213ENST00000513128 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
GYPB-213ENST00000513128 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
GYPB-213ENST00000513128 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
GYPB-213ENST00000513128 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
GYPB-213ENST00000513128 CUX1P39880 1505 aa10.8□□□□□ -0.68
GYPB-213ENST00000513128 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
GYPB-213ENST00000513128 SOGA1O94964 1423 aa10.8□□□□□ -0.68
GYPB-213ENST00000513128 FGD5Q6ZNL6 1462 aa10.8□□□□□ -0.68
GYPB-213ENST00000513128 FBLN2P98095 1184 aa10.79□□□□□ -0.68
GYPB-213ENST00000513128 ARAP1Q96P48 1450 aa10.79□□□□□ -0.68
GYPB-213ENST00000513128 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
GYPB-213ENST00000513128 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
GYPB-213ENST00000513128 CLASP1Q7Z460 1538 aa10.74□□□□□ -0.69
GYPB-213ENST00000513128 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
GYPB-213ENST00000513128 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
GYPB-213ENST00000513128 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
GYPB-213ENST00000513128 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms