RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
LETM1-204ENST00000510940 PTPN23Q9H3S7 1636 aa20.45■□□□□ 0.87
LETM1-204ENST00000510940 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
LETM1-204ENST00000510940 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
LETM1-204ENST00000510940 DIP2BQ9P265 1576 aa20.44■□□□□ 0.86
LETM1-204ENST00000510940 FAM50AQ14320 339 aaKnown RBP20.43■□□□□ 0.86
LETM1-204ENST00000510940 CDC42BPBQ9Y5S2 1711 aa20.43■□□□□ 0.86
LETM1-204ENST00000510940 TCOF1Q13428 1488 aaKnown RBP20.43■□□□□ 0.86
LETM1-204ENST00000510940 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
LETM1-204ENST00000510940 CFAP74Q9C0B2 1584 aa20.42■□□□□ 0.86
LETM1-204ENST00000510940 MAP3K4Q9Y6R4 1608 aa20.39■□□□□ 0.86
LETM1-204ENST00000510940 RSPH4AQ5TD94 716 aa20.39■□□□□ 0.85
LETM1-204ENST00000510940 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
LETM1-204ENST00000510940 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
LETM1-204ENST00000510940 FANCAO15360 1455 aa20.37■□□□□ 0.85
LETM1-204ENST00000510940 TEX14Q8IWB6 1497 aa20.36■□□□□ 0.85
LETM1-204ENST00000510940 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
LETM1-204ENST00000510940 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
LETM1-204ENST00000510940 NEO1Q92859 1461 aa20.33■□□□□ 0.85
LETM1-204ENST00000510940 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
LETM1-204ENST00000510940 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
LETM1-204ENST00000510940 ARHGEF5Q12774 1597 aa20.29■□□□□ 0.84
LETM1-204ENST00000510940 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
LETM1-204ENST00000510940 AKNAQ7Z591 1439 aa20.29■□□□□ 0.84
LETM1-204ENST00000510940 ABCC1P33527 1531 aa20.28■□□□□ 0.84
LETM1-204ENST00000510940 DNMT1P26358 1616 aaKnown RBP20.28■□□□□ 0.84
LETM1-204ENST00000510940 TSPY4P0CV99 314 aa20.28■□□□□ 0.84
LETM1-204ENST00000510940 TSPY10P0CW01 314 aa20.28■□□□□ 0.84
LETM1-204ENST00000510940 TSPOAP1O95153 1857 aa20.27■□□□□ 0.84
LETM1-204ENST00000510940 ADGRL1O94910 1474 aa20.27■□□□□ 0.84
LETM1-204ENST00000510940 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
LETM1-204ENST00000510940 ITGAEP38570 1179 aa20.26■□□□□ 0.83
LETM1-204ENST00000510940 DAPK1P53355 1430 aa20.26■□□□□ 0.83
LETM1-204ENST00000510940 SYCP2Q9BX26 1530 aa20.25■□□□□ 0.83
LETM1-204ENST00000510940 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
LETM1-204ENST00000510940 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
LETM1-204ENST00000510940 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
LETM1-204ENST00000510940 ABCC5O15440 1437 aa20.23■□□□□ 0.83
LETM1-204ENST00000510940 SCAPERQ9BY12 1400 aa20.23■□□□□ 0.83
LETM1-204ENST00000510940 CROCC2H7BZ55 1655 aa20.21■□□□□ 0.83
LETM1-204ENST00000510940 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
LETM1-204ENST00000510940 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
LETM1-204ENST00000510940 ZNF518AQ6AHZ1 1483 aa20.19■□□□□ 0.82
LETM1-204ENST00000510940 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
LETM1-204ENST00000510940 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
LETM1-204ENST00000510940 ANKRD30AQ9BXX3 1397 aa20.18■□□□□ 0.82
LETM1-204ENST00000510940 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
LETM1-204ENST00000510940 C9orf84Q5VXU9 1444 aa20.17■□□□□ 0.82
LETM1-204ENST00000510940 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
LETM1-204ENST00000510940 MAST1Q9Y2H9 1570 aa20.17■□□□□ 0.82
LETM1-204ENST00000510940 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
LETM1-204ENST00000510940 RTEL1-TNFRSF6BF6WH68 1400 aa20.15■□□□□ 0.82
LETM1-204ENST00000510940 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
LETM1-204ENST00000510940 ADGRL2O95490 1459 aa20.15■□□□□ 0.82
LETM1-204ENST00000510940 TRAPPC8Q9Y2L5 1435 aa20.14■□□□□ 0.81
LETM1-204ENST00000510940 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
LETM1-204ENST00000510940 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
LETM1-204ENST00000510940 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
LETM1-204ENST00000510940 AFAP1Q8N556 730 aa20.11■□□□□ 0.81
LETM1-204ENST00000510940 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
LETM1-204ENST00000510940 NCOA1Q15788 1441 aa20.1■□□□□ 0.81
LETM1-204ENST00000510940 KDM5CP41229 1560 aa20.1■□□□□ 0.81
LETM1-204ENST00000510940 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
LETM1-204ENST00000510940 HRCP23327 699 aa20.09■□□□□ 0.81
LETM1-204ENST00000510940 RICTORQ6R327 1708 aa20.09■□□□□ 0.81
LETM1-204ENST00000510940 PLXNC1O60486 1568 aa20.08■□□□□ 0.81
LETM1-204ENST00000510940 MLH3Q9UHC1 1453 aa20.08■□□□□ 0.81
LETM1-204ENST00000510940 GCC2Q8IWJ2 1684 aa20.07■□□□□ 0.8
LETM1-204ENST00000510940 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
LETM1-204ENST00000510940 MAGI2Q86UL8 1455 aa20.06■□□□□ 0.8
LETM1-204ENST00000510940 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
LETM1-204ENST00000510940 HECW2Q9P2P5 1572 aa20.06■□□□□ 0.8
LETM1-204ENST00000510940 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
LETM1-204ENST00000510940 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
LETM1-204ENST00000510940 KDM6BO15054 1643 aa20.05■□□□□ 0.8
LETM1-204ENST00000510940 NAIPQ13075 1403 aa20.05■□□□□ 0.8
LETM1-204ENST00000510940 RAPGEF3O95398 923 aa20.05■□□□□ 0.8
LETM1-204ENST00000510940 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
LETM1-204ENST00000510940 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
LETM1-204ENST00000510940 DUOX2Q9NRD8 1548 aa20.03■□□□□ 0.8
LETM1-204ENST00000510940 KIDINS220Q9ULH0 1771 aa20■□□□□ 0.79
LETM1-204ENST00000510940 ANKRD50Q9ULJ7 1429 aa20■□□□□ 0.79
LETM1-204ENST00000510940 FRMPD1Q5SYB0 1578 aa20■□□□□ 0.79
LETM1-204ENST00000510940 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
LETM1-204ENST00000510940 ERBINQ96RT1 1412 aa19.99■□□□□ 0.79
LETM1-204ENST00000510940 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.79
LETM1-204ENST00000510940 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
LETM1-204ENST00000510940 A2MP01023 1474 aa19.93■□□□□ 0.78
LETM1-204ENST00000510940 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
LETM1-204ENST00000510940 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
LETM1-204ENST00000510940 ATP10AO60312 1499 aa19.91■□□□□ 0.78
LETM1-204ENST00000510940 DIP2CQ9Y2E4 1556 aa19.91■□□□□ 0.78
LETM1-204ENST00000510940 ARHGEF40Q8TER5 1519 aa19.9■□□□□ 0.78
LETM1-204ENST00000510940 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
LETM1-204ENST00000510940 REREQ9P2R6 1566 aa19.89■□□□□ 0.77
LETM1-204ENST00000510940 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
LETM1-204ENST00000510940 BCORL1Q5H9F3 1711 aa19.85■□□□□ 0.77
LETM1-204ENST00000510940 KANK1Q14678 1352 aa19.84■□□□□ 0.77
LETM1-204ENST00000510940 KIF3BO15066 747 aa19.84■□□□□ 0.77
LETM1-204ENST00000510940 UNC13BO14795 1591 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms