RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
CALCOCO2-217ENST00000510356 KCNH8Q96L42 1107 aa14.46□□□□□ -0.09
CALCOCO2-217ENST00000510356 PHLDB1Q86UU1 1377 aa14.46□□□□□ -0.1
CALCOCO2-217ENST00000510356 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
CALCOCO2-217ENST00000510356 PTPRMP28827 1452 aa14.44□□□□□ -0.1
CALCOCO2-217ENST00000510356 UGGT2Q9NYU1 1516 aa14.44□□□□□ -0.1
CALCOCO2-217ENST00000510356 CFAP43Q8NDM7 1665 aa14.43□□□□□ -0.1
CALCOCO2-217ENST00000510356 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
CALCOCO2-217ENST00000510356 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
CALCOCO2-217ENST00000510356 SOCS7O14512 581 aa14.4□□□□□ -0.1
CALCOCO2-217ENST00000510356 KIF21BO75037 1637 aa14.4□□□□□ -0.1
CALCOCO2-217ENST00000510356 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
CALCOCO2-217ENST00000510356 PCF11O94913 1555 aaKnown RBP14.38□□□□□ -0.11
CALCOCO2-217ENST00000510356 ARID4BQ4LE39 1312 aaPredicted RBP14.38□□□□□ -0.11
CALCOCO2-217ENST00000510356 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
CALCOCO2-217ENST00000510356 CERKQ8TCT0 537 aa14.37□□□□□ -0.11
CALCOCO2-217ENST00000510356 GOLGA3Q08378 1498 aa14.37□□□□□ -0.11
CALCOCO2-217ENST00000510356 ADAMTSL3P82987 1691 aa14.36□□□□□ -0.11
CALCOCO2-217ENST00000510356 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
CALCOCO2-217ENST00000510356 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
CALCOCO2-217ENST00000510356 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
CALCOCO2-217ENST00000510356 RAPGEF3O95398 923 aa14.3□□□□□ -0.12
CALCOCO2-217ENST00000510356 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
CALCOCO2-217ENST00000510356 ABCA8O94911 1581 aa14.3□□□□□ -0.12
CALCOCO2-217ENST00000510356 NEO1Q92859 1461 aa14.29□□□□□ -0.12
CALCOCO2-217ENST00000510356 BCORL1Q5H9F3 1711 aa14.27□□□□□ -0.12
CALCOCO2-217ENST00000510356 POGZQ7Z3K3 1410 aa14.27□□□□□ -0.12
CALCOCO2-217ENST00000510356 HSPA2P54652 639 aa14.27□□□□□ -0.13
CALCOCO2-217ENST00000510356 ILDR2Q71H61 639 aa14.27□□□□□ -0.13
CALCOCO2-217ENST00000510356 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
CALCOCO2-217ENST00000510356 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
CALCOCO2-217ENST00000510356 MADDQ8WXG6 1647 aa14.25□□□□□ -0.13
CALCOCO2-217ENST00000510356 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
CALCOCO2-217ENST00000510356 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
CALCOCO2-217ENST00000510356 ATP10BO94823 1461 aa14.21□□□□□ -0.13
CALCOCO2-217ENST00000510356 FANCAO15360 1455 aa14.19□□□□□ -0.14
CALCOCO2-217ENST00000510356 AKNAQ7Z591 1439 aa14.19□□□□□ -0.14
CALCOCO2-217ENST00000510356 RIMS1Q86UR5 1692 aaKnown RBP14.18□□□□□ -0.14
CALCOCO2-217ENST00000510356 ARID3CA6NKF2 412 aa14.18□□□□□ -0.14
CALCOCO2-217ENST00000510356 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
CALCOCO2-217ENST00000510356 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
CALCOCO2-217ENST00000510356 CTTNBP2Q8WZ74 1663 aa14.16□□□□□ -0.14
CALCOCO2-217ENST00000510356 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
CALCOCO2-217ENST00000510356 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
CALCOCO2-217ENST00000510356 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
CALCOCO2-217ENST00000510356 PLEKHD1A6NEE1 506 aa14.13□□□□□ -0.15
CALCOCO2-217ENST00000510356 MIER1Q8N108 512 aa14.13□□□□□ -0.15
CALCOCO2-217ENST00000510356 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
CALCOCO2-217ENST00000510356 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
CALCOCO2-217ENST00000510356 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
CALCOCO2-217ENST00000510356 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
CALCOCO2-217ENST00000510356 P3H3Q8IVL6 736 aa14.11□□□□□ -0.15
CALCOCO2-217ENST00000510356 EFCAB5A4FU69 1503 aa14.1□□□□□ -0.15
CALCOCO2-217ENST00000510356 MLECQ14165 292 aa14.1□□□□□ -0.15
CALCOCO2-217ENST00000510356 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
CALCOCO2-217ENST00000510356 ZFYVE16Q7Z3T8 1539 aa14.08□□□□□ -0.16
CALCOCO2-217ENST00000510356 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.16
CALCOCO2-217ENST00000510356 ZMYM4Q5VZL5 1548 aa14.06□□□□□ -0.16
CALCOCO2-217ENST00000510356 TTC37Q6PGP7 1564 aa14.06□□□□□ -0.16
CALCOCO2-217ENST00000510356 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
CALCOCO2-217ENST00000510356 RICTORQ6R327 1708 aa14.05□□□□□ -0.16
CALCOCO2-217ENST00000510356 PTPRTO14522 1441 aa14.05□□□□□ -0.16
CALCOCO2-217ENST00000510356 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
CALCOCO2-217ENST00000510356 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
CALCOCO2-217ENST00000510356 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
CALCOCO2-217ENST00000510356 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
CALCOCO2-217ENST00000510356 PREX1Q8TCU6 1659 aa14.03□□□□□ -0.16
CALCOCO2-217ENST00000510356 ATP10AO60312 1499 aa14.02□□□□□ -0.16
CALCOCO2-217ENST00000510356 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.17
CALCOCO2-217ENST00000510356 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
CALCOCO2-217ENST00000510356 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
CALCOCO2-217ENST00000510356 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
CALCOCO2-217ENST00000510356 C9orf84Q5VXU9 1444 aa14□□□□□ -0.17
CALCOCO2-217ENST00000510356 CEBPAP49715 358 aaPredicted RBP14□□□□□ -0.17
CALCOCO2-217ENST00000510356 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
CALCOCO2-217ENST00000510356 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
CALCOCO2-217ENST00000510356 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
CALCOCO2-217ENST00000510356 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
CALCOCO2-217ENST00000510356 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
CALCOCO2-217ENST00000510356 SETD1BQ9UPS6 1966 aaKnown RBP13.97□□□□□ -0.17
CALCOCO2-217ENST00000510356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.96□□□□□ -0.17
CALCOCO2-217ENST00000510356 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
CALCOCO2-217ENST00000510356 EFCAB2Q5VUJ9 269 aa13.96□□□□□ -0.17
CALCOCO2-217ENST00000510356 STRCQ7RTU9 1775 aa13.96□□□□□ -0.18
CALCOCO2-217ENST00000510356 SAMD9Q5K651 1589 aa13.96□□□□□ -0.18
CALCOCO2-217ENST00000510356 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
CALCOCO2-217ENST00000510356 PLCH2O75038 1416 aa13.95□□□□□ -0.18
CALCOCO2-217ENST00000510356 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO2-217ENST00000510356 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
CALCOCO2-217ENST00000510356 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
CALCOCO2-217ENST00000510356 SIGLEC1Q9BZZ2 1709 aa13.92□□□□□ -0.18
CALCOCO2-217ENST00000510356 TRAPPC8Q9Y2L5 1435 aa13.91□□□□□ -0.18
CALCOCO2-217ENST00000510356 UBAP1LF5GYI3 381 aa13.91□□□□□ -0.18
CALCOCO2-217ENST00000510356 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
CALCOCO2-217ENST00000510356 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-217ENST00000510356 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
CALCOCO2-217ENST00000510356 ZNF518AQ6AHZ1 1483 aa13.89□□□□□ -0.19
CALCOCO2-217ENST00000510356 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
CALCOCO2-217ENST00000510356 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
CALCOCO2-217ENST00000510356 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms