RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
YIPF3-213ENST00000506469 ARAP3Q8WWN8 1544 aa21.87■■□□□ 1.09
YIPF3-213ENST00000506469 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
YIPF3-213ENST00000506469 FAM50AQ14320 339 aaKnown RBP21.86■■□□□ 1.09
YIPF3-213ENST00000506469 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
YIPF3-213ENST00000506469 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
YIPF3-213ENST00000506469 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
YIPF3-213ENST00000506469 PTPN23Q9H3S7 1636 aa21.85■■□□□ 1.09
YIPF3-213ENST00000506469 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
YIPF3-213ENST00000506469 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
YIPF3-213ENST00000506469 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
YIPF3-213ENST00000506469 FANCAO15360 1455 aa21.83■■□□□ 1.09
YIPF3-213ENST00000506469 CAMSAP2Q08AD1 1489 aa21.83■■□□□ 1.08
YIPF3-213ENST00000506469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.8■■□□□ 1.08
YIPF3-213ENST00000506469 SAMD9LQ8IVG5 1584 aa21.8■■□□□ 1.08
YIPF3-213ENST00000506469 AKNAQ7Z591 1439 aa21.77■■□□□ 1.08
YIPF3-213ENST00000506469 PLEKHH2Q8IVE3 1493 aa21.76■■□□□ 1.07
YIPF3-213ENST00000506469 TEX14Q8IWB6 1497 aa21.76■■□□□ 1.07
YIPF3-213ENST00000506469 NEO1Q92859 1461 aa21.76■■□□□ 1.07
YIPF3-213ENST00000506469 CFAP74Q9C0B2 1584 aa21.76■■□□□ 1.07
YIPF3-213ENST00000506469 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
YIPF3-213ENST00000506469 KIAA1107Q9UPP5 1409 aa21.74■■□□□ 1.07
YIPF3-213ENST00000506469 HNRNPMP52272 730 aaKnown RBP eCLIP21.74■■□□□ 1.07
YIPF3-213ENST00000506469 ABCC1P33527 1531 aa21.74■■□□□ 1.07
YIPF3-213ENST00000506469 ITGAEP38570 1179 aa21.73■■□□□ 1.07
YIPF3-213ENST00000506469 ADGRL1O94910 1474 aa21.73■■□□□ 1.07
YIPF3-213ENST00000506469 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
YIPF3-213ENST00000506469 ARHGEF12Q9NZN5 1544 aa21.72■■□□□ 1.07
YIPF3-213ENST00000506469 TSPOAP1O95153 1857 aa21.72■■□□□ 1.07
YIPF3-213ENST00000506469 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
YIPF3-213ENST00000506469 SCAPERQ9BY12 1400 aa21.71■■□□□ 1.07
YIPF3-213ENST00000506469 ABCC5O15440 1437 aa21.69■■□□□ 1.06
YIPF3-213ENST00000506469 DAPK1P53355 1430 aa21.69■■□□□ 1.06
YIPF3-213ENST00000506469 DNMT1P26358 1616 aaKnown RBP21.67■■□□□ 1.06
YIPF3-213ENST00000506469 ARHGEF5Q12774 1597 aa21.67■■□□□ 1.06
YIPF3-213ENST00000506469 TRAPPC8Q9Y2L5 1435 aa21.67■■□□□ 1.06
YIPF3-213ENST00000506469 RSPH4AQ5TD94 716 aa21.67■■□□□ 1.06
YIPF3-213ENST00000506469 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
YIPF3-213ENST00000506469 CCDC141Q6ZP82 1450 aa21.66■■□□□ 1.06
YIPF3-213ENST00000506469 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
YIPF3-213ENST00000506469 AFAP1Q8N556 730 aa21.63■■□□□ 1.05
YIPF3-213ENST00000506469 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
YIPF3-213ENST00000506469 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
YIPF3-213ENST00000506469 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
YIPF3-213ENST00000506469 POGZQ7Z3K3 1410 aa21.62■■□□□ 1.05
YIPF3-213ENST00000506469 CHIC2Q9UKJ5 165 aa21.62■■□□□ 1.05
YIPF3-213ENST00000506469 ZNF518AQ6AHZ1 1483 aa21.6■■□□□ 1.05
YIPF3-213ENST00000506469 RAPGEF3O95398 923 aa21.6■■□□□ 1.05
YIPF3-213ENST00000506469 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
YIPF3-213ENST00000506469 C9orf84Q5VXU9 1444 aa21.59■■□□□ 1.05
YIPF3-213ENST00000506469 CROCC2H7BZ55 1655 aa21.58■■□□□ 1.05
YIPF3-213ENST00000506469 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
YIPF3-213ENST00000506469 SPAG9O60271 1321 aaKnown RBP21.57■■□□□ 1.04
YIPF3-213ENST00000506469 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
YIPF3-213ENST00000506469 KDM5CP41229 1560 aa21.54■■□□□ 1.04
YIPF3-213ENST00000506469 ROCK1Q13464 1354 aa21.54■■□□□ 1.04
YIPF3-213ENST00000506469 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
YIPF3-213ENST00000506469 ADGRL2O95490 1459 aa21.53■■□□□ 1.04
YIPF3-213ENST00000506469 RTEL1-TNFRSF6BF6WH68 1400 aa21.53■■□□□ 1.04
YIPF3-213ENST00000506469 RICTORQ6R327 1708 aa21.53■■□□□ 1.04
YIPF3-213ENST00000506469 ANKRD30AQ9BXX3 1397 aa21.52■■□□□ 1.04
YIPF3-213ENST00000506469 RRP7BPQ9NSQ0 103 aa21.52■■□□□ 1.04
YIPF3-213ENST00000506469 MYT1LQ9UL68 1186 aa21.52■■□□□ 1.04
YIPF3-213ENST00000506469 NCOA1Q15788 1441 aa21.51■■□□□ 1.03
YIPF3-213ENST00000506469 ZFYVE16Q7Z3T8 1539 aa21.51■■□□□ 1.03
YIPF3-213ENST00000506469 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
YIPF3-213ENST00000506469 ATP7AQ04656 1500 aa21.49■■□□□ 1.03
YIPF3-213ENST00000506469 INO80Q9ULG1 1556 aaPredicted RBP21.49■■□□□ 1.03
YIPF3-213ENST00000506469 KDM6BO15054 1643 aa21.48■■□□□ 1.03
YIPF3-213ENST00000506469 ADGBQ8N7X0 1667 aa21.48■■□□□ 1.03
YIPF3-213ENST00000506469 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
YIPF3-213ENST00000506469 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
YIPF3-213ENST00000506469 HFM1A2PYH4 1435 aa21.47■■□□□ 1.03
YIPF3-213ENST00000506469 KIF15Q9NS87 1388 aa21.46■■□□□ 1.03
YIPF3-213ENST00000506469 NAIPQ13075 1403 aa21.46■■□□□ 1.03
YIPF3-213ENST00000506469 PLXNC1O60486 1568 aa21.45■■□□□ 1.03
YIPF3-213ENST00000506469 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
YIPF3-213ENST00000506469 MAGI2Q86UL8 1455 aa21.44■■□□□ 1.02
YIPF3-213ENST00000506469 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
YIPF3-213ENST00000506469 YEATS2Q9ULM3 1422 aa21.42■■□□□ 1.02
YIPF3-213ENST00000506469 GCC2Q8IWJ2 1684 aa21.39■■□□□ 1.02
YIPF3-213ENST00000506469 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
YIPF3-213ENST00000506469 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.01
YIPF3-213ENST00000506469 ANKRD50Q9ULJ7 1429 aa21.38■■□□□ 1.01
YIPF3-213ENST00000506469 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
YIPF3-213ENST00000506469 RAB3GAP2Q9H2M9 1393 aa21.38■■□□□ 1.01
YIPF3-213ENST00000506469 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
YIPF3-213ENST00000506469 A2MP01023 1474 aa21.36■■□□□ 1.01
YIPF3-213ENST00000506469 ERBINQ96RT1 1412 aa21.34■■□□□ 1.01
YIPF3-213ENST00000506469 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
YIPF3-213ENST00000506469 ATP10AO60312 1499 aa21.34■■□□□ 1.01
YIPF3-213ENST00000506469 HRCP23327 699 aa21.31■■□□□ 1
YIPF3-213ENST00000506469 REREQ9P2R6 1566 aa21.27■■□□□ 1
YIPF3-213ENST00000506469 KIF3BO15066 747 aa21.27■■□□□ 1
YIPF3-213ENST00000506469 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
YIPF3-213ENST00000506469 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
YIPF3-213ENST00000506469 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
YIPF3-213ENST00000506469 AGLP35573 1532 aa21.21■□□□□ 0.99
YIPF3-213ENST00000506469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.21■□□□□ 0.991e-6■■□□□ 12.8
YIPF3-213ENST00000506469 UNC13BO14795 1591 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms