RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
YIPF3-213ENST00000506469 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
YIPF3-213ENST00000506469 ABCC9O60706 1549 aa28.44■■■□□ 2.14
YIPF3-213ENST00000506469 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
YIPF3-213ENST00000506469 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
YIPF3-213ENST00000506469 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
YIPF3-213ENST00000506469 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
YIPF3-213ENST00000506469 NACADO15069 1562 aa27.67■■■□□ 2.02
YIPF3-213ENST00000506469 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
YIPF3-213ENST00000506469 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
YIPF3-213ENST00000506469 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
YIPF3-213ENST00000506469 UNC13AQ9UPW8 1703 aa26.88■■□□□ 1.89
YIPF3-213ENST00000506469 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.87
YIPF3-213ENST00000506469 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
YIPF3-213ENST00000506469 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
YIPF3-213ENST00000506469 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
YIPF3-213ENST00000506469 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
YIPF3-213ENST00000506469 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
YIPF3-213ENST00000506469 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
YIPF3-213ENST00000506469 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
YIPF3-213ENST00000506469 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
YIPF3-213ENST00000506469 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
YIPF3-213ENST00000506469 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
YIPF3-213ENST00000506469 WIZO95785 1651 aa25.66■■□□□ 1.7
YIPF3-213ENST00000506469 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
YIPF3-213ENST00000506469 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
YIPF3-213ENST00000506469 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
YIPF3-213ENST00000506469 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
YIPF3-213ENST00000506469 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
YIPF3-213ENST00000506469 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
YIPF3-213ENST00000506469 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
YIPF3-213ENST00000506469 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
YIPF3-213ENST00000506469 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
YIPF3-213ENST00000506469 CFTRP13569 1480 aa24.82■■□□□ 1.56
YIPF3-213ENST00000506469 NESP48681 1621 aa24.78■■□□□ 1.56
YIPF3-213ENST00000506469 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
YIPF3-213ENST00000506469 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
YIPF3-213ENST00000506469 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
YIPF3-213ENST00000506469 FANCD2Q9BXW9 1451 aa24.57■■□□□ 1.52
YIPF3-213ENST00000506469 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
YIPF3-213ENST00000506469 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
YIPF3-213ENST00000506469 KIF21AQ7Z4S6 1674 aa24.44■■□□□ 1.5
YIPF3-213ENST00000506469 ABCC8Q09428 1581 aa24.41■■□□□ 1.5
YIPF3-213ENST00000506469 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
YIPF3-213ENST00000506469 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
YIPF3-213ENST00000506469 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
YIPF3-213ENST00000506469 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
YIPF3-213ENST00000506469 CUX1P39880 1505 aa24.28■■□□□ 1.48
YIPF3-213ENST00000506469 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
YIPF3-213ENST00000506469 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
YIPF3-213ENST00000506469 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
YIPF3-213ENST00000506469 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
YIPF3-213ENST00000506469 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
YIPF3-213ENST00000506469 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
YIPF3-213ENST00000506469 WDR62O43379 1518 aa24.2■■□□□ 1.46
YIPF3-213ENST00000506469 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
YIPF3-213ENST00000506469 FGD5Q6ZNL6 1462 aa24.12■■□□□ 1.45
YIPF3-213ENST00000506469 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.44
YIPF3-213ENST00000506469 SOGA1O94964 1423 aa24.01■■□□□ 1.43
YIPF3-213ENST00000506469 CUX2O14529 1486 aa24■■□□□ 1.43
YIPF3-213ENST00000506469 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
YIPF3-213ENST00000506469 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
YIPF3-213ENST00000506469 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
YIPF3-213ENST00000506469 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.42
YIPF3-213ENST00000506469 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
YIPF3-213ENST00000506469 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
YIPF3-213ENST00000506469 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
YIPF3-213ENST00000506469 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
YIPF3-213ENST00000506469 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
YIPF3-213ENST00000506469 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.392e-8■■■□□ 18.4
YIPF3-213ENST00000506469 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
YIPF3-213ENST00000506469 EEA1Q15075 1411 aa23.73■■□□□ 1.39
YIPF3-213ENST00000506469 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
YIPF3-213ENST00000506469 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
YIPF3-213ENST00000506469 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
YIPF3-213ENST00000506469 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
YIPF3-213ENST00000506469 IGF1RP08069 1367 aa23.65■■□□□ 1.38
YIPF3-213ENST00000506469 GRIN2BQ13224 1484 aa23.64■■□□□ 1.37
YIPF3-213ENST00000506469 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
YIPF3-213ENST00000506469 PBRM1Q86U86 1689 aa23.58■■□□□ 1.37
YIPF3-213ENST00000506469 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
YIPF3-213ENST00000506469 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
YIPF3-213ENST00000506469 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
YIPF3-213ENST00000506469 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
YIPF3-213ENST00000506469 CUL7Q14999 1698 aa23.48■■□□□ 1.35
YIPF3-213ENST00000506469 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
YIPF3-213ENST00000506469 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
YIPF3-213ENST00000506469 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
YIPF3-213ENST00000506469 KIF21BO75037 1637 aa23.42■■□□□ 1.34
YIPF3-213ENST00000506469 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
YIPF3-213ENST00000506469 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
YIPF3-213ENST00000506469 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
YIPF3-213ENST00000506469 FBLN2P98095 1184 aa23.37■■□□□ 1.33
YIPF3-213ENST00000506469 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
YIPF3-213ENST00000506469 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
YIPF3-213ENST00000506469 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
YIPF3-213ENST00000506469 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
YIPF3-213ENST00000506469 CHD1O14646 1710 aa23.25■■□□□ 1.31
YIPF3-213ENST00000506469 NUP160Q12769 1436 aa23.2■■□□□ 1.3
YIPF3-213ENST00000506469 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms