RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TRHP20396 242 aaPredicted RBP31.23■■■□□ 2.59
CDC42SE2-206ENST00000503291 ARHGAP5Q13017 1502 aa31.21■■■□□ 2.59
CDC42SE2-206ENST00000503291 ZNF777Q9ULD5 760 aaPredicted RBP31.21■■■□□ 2.59
CDC42SE2-206ENST00000503291 RRBP1Q9P2E9 1410 aaKnown RBP31.2■■■□□ 2.59
CDC42SE2-206ENST00000503291 EFCAB2Q5VUJ9 269 aa31.19■■■□□ 2.58
CDC42SE2-206ENST00000503291 ARAP3Q8WWN8 1544 aa31.18■■■□□ 2.58
CDC42SE2-206ENST00000503291 ZNF644Q9H582 1327 aaPredicted RBP31.18■■■□□ 2.58
CDC42SE2-206ENST00000503291 FAM50AQ14320 339 aaKnown RBP31.15■■■□□ 2.58
CDC42SE2-206ENST00000503291 PTPN23Q9H3S7 1636 aa31.15■■■□□ 2.58
CDC42SE2-206ENST00000503291 FANCAO15360 1455 aa31.14■■■□□ 2.58
CDC42SE2-206ENST00000503291 TRIM26Q12899 539 aaPredicted RBP31.12■■■□□ 2.57
CDC42SE2-206ENST00000503291 TSPOAP1O95153 1857 aa31.12■■■□□ 2.57
CDC42SE2-206ENST00000503291 TCOF1Q13428 1488 aaKnown RBP31.1■■■□□ 2.57
CDC42SE2-206ENST00000503291 CAMSAP2Q08AD1 1489 aa31.09■■■□□ 2.57
CDC42SE2-206ENST00000503291 SAMD9LQ8IVG5 1584 aa31.09■■■□□ 2.57
CDC42SE2-206ENST00000503291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.07■■■□□ 2.56
CDC42SE2-206ENST00000503291 PPRC1Q5VV67 1664 aaKnown RBP31.06■■■□□ 2.56
CDC42SE2-206ENST00000503291 AKNAQ7Z591 1439 aa31.04■■■□□ 2.56
CDC42SE2-206ENST00000503291 HNRNPMP52272 730 aaKnown RBP eCLIP31.03■■■□□ 2.563e-7■■■■■ 27.8
CDC42SE2-206ENST00000503291 TEX14Q8IWB6 1497 aa31.03■■■□□ 2.56
CDC42SE2-206ENST00000503291 NEO1Q92859 1461 aa31.03■■■□□ 2.56
CDC42SE2-206ENST00000503291 CFAP74Q9C0B2 1584 aa31.02■■■□□ 2.56
CDC42SE2-206ENST00000503291 PLEKHH2Q8IVE3 1493 aa31.01■■■□□ 2.56
CDC42SE2-206ENST00000503291 KIAA1107Q9UPP5 1409 aa31■■■□□ 2.55
CDC42SE2-206ENST00000503291 ADGRL1O94910 1474 aa30.98■■■□□ 2.55
CDC42SE2-206ENST00000503291 ABCC1P33527 1531 aa30.98■■■□□ 2.55
CDC42SE2-206ENST00000503291 ITGAEP38570 1179 aa30.98■■■□□ 2.55
CDC42SE2-206ENST00000503291 ARHGEF12Q9NZN5 1544 aa30.97■■■□□ 2.55
CDC42SE2-206ENST00000503291 SYCP2Q9BX26 1530 aa30.97■■■□□ 2.55
CDC42SE2-206ENST00000503291 MBD5Q9P267 1494 aa30.97■■■□□ 2.55
CDC42SE2-206ENST00000503291 SCAPERQ9BY12 1400 aa30.96■■■□□ 2.55
CDC42SE2-206ENST00000503291 RSPH4AQ5TD94 716 aa30.93■■■□□ 2.54
CDC42SE2-206ENST00000503291 ABCC5O15440 1437 aa30.91■■■□□ 2.54
CDC42SE2-206ENST00000503291 DAPK1P53355 1430 aa30.9■■■□□ 2.54
CDC42SE2-206ENST00000503291 ARHGEF5Q12774 1597 aa30.9■■■□□ 2.54
CDC42SE2-206ENST00000503291 DNMT1P26358 1616 aaKnown RBP30.9■■■□□ 2.54
CDC42SE2-206ENST00000503291 TRAPPC8Q9Y2L5 1435 aa30.89■■■□□ 2.54
CDC42SE2-206ENST00000503291 PCGF6Q9BYE7 350 aa30.89■■■□□ 2.54
CDC42SE2-206ENST00000503291 AFAP1Q8N556 730 aa30.88■■■□□ 2.53
CDC42SE2-206ENST00000503291 PTPRKQ15262 1439 aa30.87■■■□□ 2.53
CDC42SE2-206ENST00000503291 CCDC141Q6ZP82 1450 aa30.86■■■□□ 2.53
CDC42SE2-206ENST00000503291 TSPY4P0CV99 314 aa30.85■■■□□ 2.53
CDC42SE2-206ENST00000503291 TSPY10P0CW01 314 aa30.85■■■□□ 2.53
CDC42SE2-206ENST00000503291 DENND4BO75064 1496 aaPredicted RBP30.85■■■□□ 2.53
CDC42SE2-206ENST00000503291 RAPGEF3O95398 923 aa30.84■■■□□ 2.53
CDC42SE2-206ENST00000503291 CHIC2Q9UKJ5 165 aa30.83■■■□□ 2.53
CDC42SE2-206ENST00000503291 POGZQ7Z3K3 1410 aa30.82■■■□□ 2.52
CDC42SE2-206ENST00000503291 ZNF518AQ6AHZ1 1483 aa30.8■■■□□ 2.52
CDC42SE2-206ENST00000503291 COL17A1Q9UMD9 1497 aaPredicted RBP30.79■■■□□ 2.52
CDC42SE2-206ENST00000503291 CROCC2H7BZ55 1655 aa30.78■■■□□ 2.52
CDC42SE2-206ENST00000503291 C9orf84Q5VXU9 1444 aa30.76■■■□□ 2.52
CDC42SE2-206ENST00000503291 SPAG9O60271 1321 aaKnown RBP30.76■■■□□ 2.51
CDC42SE2-206ENST00000503291 SHANK2Q9UPX8 1470 aa30.76■■■□□ 2.51
CDC42SE2-206ENST00000503291 RICTORQ6R327 1708 aa30.75■■■□□ 2.51
CDC42SE2-206ENST00000503291 KDM5CP41229 1560 aa30.72■■■□□ 2.51
CDC42SE2-206ENST00000503291 FRMPD1Q5SYB0 1578 aa30.71■■■□□ 2.51
CDC42SE2-206ENST00000503291 MYT1LQ9UL68 1186 aa30.71■■■□□ 2.51
CDC42SE2-206ENST00000503291 MAST1Q9Y2H9 1570 aa30.7■■■□□ 2.5
CDC42SE2-206ENST00000503291 RRP7BPQ9NSQ0 103 aa30.69■■■□□ 2.5
CDC42SE2-206ENST00000503291 ROCK1Q13464 1354 aa30.69■■■□□ 2.5
CDC42SE2-206ENST00000503291 RTEL1-TNFRSF6BF6WH68 1400 aa30.69■■■□□ 2.5
CDC42SE2-206ENST00000503291 NCOA1Q15788 1441 aa30.68■■■□□ 2.5
CDC42SE2-206ENST00000503291 ANKRD30AQ9BXX3 1397 aa30.67■■■□□ 2.5
CDC42SE2-206ENST00000503291 ADGRL2O95490 1459 aa30.67■■■□□ 2.5
CDC42SE2-206ENST00000503291 MLH3Q9UHC1 1453 aa30.66■■■□□ 2.5
CDC42SE2-206ENST00000503291 KDM6BO15054 1643 aa30.65■■■□□ 2.5
CDC42SE2-206ENST00000503291 ZFYVE16Q7Z3T8 1539 aa30.65■■■□□ 2.5
CDC42SE2-206ENST00000503291 ADGBQ8N7X0 1667 aa30.64■■■□□ 2.5
CDC42SE2-206ENST00000503291 ATP7AQ04656 1500 aa30.64■■■□□ 2.5
CDC42SE2-206ENST00000503291 INO80Q9ULG1 1556 aaPredicted RBP30.64■■■□□ 2.5
CDC42SE2-206ENST00000503291 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
CDC42SE2-206ENST00000503291 KIDINS220Q9ULH0 1771 aa30.62■■■□□ 2.49
CDC42SE2-206ENST00000503291 ZMYM4Q5VZL5 1548 aa30.62■■■□□ 2.49
CDC42SE2-206ENST00000503291 HFM1A2PYH4 1435 aa30.6■■■□□ 2.49
CDC42SE2-206ENST00000503291 KIF15Q9NS87 1388 aa30.59■■■□□ 2.49
CDC42SE2-206ENST00000503291 NAIPQ13075 1403 aa30.58■■■□□ 2.49
CDC42SE2-206ENST00000503291 PLXNC1O60486 1568 aa30.58■■■□□ 2.49
CDC42SE2-206ENST00000503291 MAGI2Q86UL8 1455 aa30.58■■■□□ 2.49
CDC42SE2-206ENST00000503291 YEATS2Q9ULM3 1422 aa30.55■■■□□ 2.48
CDC42SE2-206ENST00000503291 SETD5Q9C0A6 1442 aa30.54■■■□□ 2.48
CDC42SE2-206ENST00000503291 ABCA6Q8N139 1617 aa30.5■■■□□ 2.47
CDC42SE2-206ENST00000503291 GCC2Q8IWJ2 1684 aa30.5■■■□□ 2.47
CDC42SE2-206ENST00000503291 ANKRD50Q9ULJ7 1429 aa30.49■■■□□ 2.47
CDC42SE2-206ENST00000503291 DUOX2Q9NRD8 1548 aa30.48■■■□□ 2.47
CDC42SE2-206ENST00000503291 DIP2CQ9Y2E4 1556 aa30.48■■■□□ 2.47
CDC42SE2-206ENST00000503291 RAB3GAP2Q9H2M9 1393 aa30.46■■■□□ 2.47
CDC42SE2-206ENST00000503291 DHX29Q7Z478 1369 aaKnown RBP30.46■■■□□ 2.47
CDC42SE2-206ENST00000503291 A2MP01023 1474 aa30.45■■■□□ 2.47
CDC42SE2-206ENST00000503291 ATP10AO60312 1499 aa30.43■■■□□ 2.46
CDC42SE2-206ENST00000503291 ARHGEF40Q8TER5 1519 aa30.41■■■□□ 2.46
CDC42SE2-206ENST00000503291 ERBINQ96RT1 1412 aa30.41■■■□□ 2.46
CDC42SE2-206ENST00000503291 HRCP23327 699 aa30.39■■■□□ 2.45
CDC42SE2-206ENST00000503291 KIF3BO15066 747 aa30.35■■■□□ 2.45
CDC42SE2-206ENST00000503291 REREQ9P2R6 1566 aa30.33■■■□□ 2.45
CDC42SE2-206ENST00000503291 EIF2AK4Q9P2K8 1649 aaKnown RBP30.3■■■□□ 2.44
CDC42SE2-206ENST00000503291 TRIM52Q96A61 297 aa30.29■■■□□ 2.44
CDC42SE2-206ENST00000503291 ACIN1Q9UKV3 1341 aaKnown RBP30.27■■■□□ 2.44
CDC42SE2-206ENST00000503291 SIGLEC1Q9BZZ2 1709 aa30.26■■■□□ 2.43
CDC42SE2-206ENST00000503291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.25■■■□□ 2.431e-6■■■□□ 18.6
CDC42SE2-206ENST00000503291 AGLP35573 1532 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms