RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
RBM39-239ENST00000494274 ARHGAP5Q13017 1502 aa11.45□□□□□ -0.58
RBM39-239ENST00000494274 HNRNPMP52272 730 aaKnown RBP eCLIP11.45□□□□□ -0.58
RBM39-239ENST00000494274 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
RBM39-239ENST00000494274 CCNB3Q8WWL7 1395 aa11.44□□□□□ -0.58
RBM39-239ENST00000494274 KIF14Q15058 1648 aa11.44□□□□□ -0.58
RBM39-239ENST00000494274 POGZQ7Z3K3 1410 aa11.43□□□□□ -0.58
RBM39-239ENST00000494274 APLP2Q06481 763 aa11.41□□□□□ -0.58
RBM39-239ENST00000494274 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.58
RBM39-239ENST00000494274 ZNF644Q9H582 1327 aaPredicted RBP11.4□□□□□ -0.58
RBM39-239ENST00000494274 MAGI2Q86UL8 1455 aa11.4□□□□□ -0.58
RBM39-239ENST00000494274 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.58
RBM39-239ENST00000494274 FRMPD1Q5SYB0 1578 aa11.4□□□□□ -0.58
RBM39-239ENST00000494274 CFAP74Q9C0B2 1584 aa11.4□□□□□ -0.58
RBM39-239ENST00000494274 KANK4Q5T7N3 995 aaPredicted RBP11.39□□□□□ -0.59
RBM39-239ENST00000494274 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
RBM39-239ENST00000494274 ATP10AO60312 1499 aa11.38□□□□□ -0.59
RBM39-239ENST00000494274 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
RBM39-239ENST00000494274 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
RBM39-239ENST00000494274 ZFYVE16Q7Z3T8 1539 aa11.38□□□□□ -0.59
RBM39-239ENST00000494274 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
RBM39-239ENST00000494274 ARHGEF12Q9NZN5 1544 aa11.37□□□□□ -0.59
RBM39-239ENST00000494274 ESF1Q9H501 851 aaKnown RBP11.36□□□□□ -0.59
RBM39-239ENST00000494274 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
RBM39-239ENST00000494274 PTPRMP28827 1452 aa11.35□□□□□ -0.59
RBM39-239ENST00000494274 MYO5CQ9NQX4 1742 aa11.35□□□□□ -0.59
RBM39-239ENST00000494274 ZMYM4Q5VZL5 1548 aa11.35□□□□□ -0.59
RBM39-239ENST00000494274 RICTORQ6R327 1708 aa11.34□□□□□ -0.59
RBM39-239ENST00000494274 C9orf84Q5VXU9 1444 aa11.34□□□□□ -0.59
RBM39-239ENST00000494274 MLH3Q9UHC1 1453 aa11.33□□□□□ -0.6
RBM39-239ENST00000494274 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.6
RBM39-239ENST00000494274 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
RBM39-239ENST00000494274 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
RBM39-239ENST00000494274 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
RBM39-239ENST00000494274 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
RBM39-239ENST00000494274 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
RBM39-239ENST00000494274 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
RBM39-239ENST00000494274 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
RBM39-239ENST00000494274 LRRC9Q6ZRR7 1453 aa11.31□□□□□ -0.6
RBM39-239ENST00000494274 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
RBM39-239ENST00000494274 ABCC1P33527 1531 aa11.3□□□□□ -0.6
RBM39-239ENST00000494274 CDC42BPBQ9Y5S2 1711 aa11.3□□□□□ -0.6
RBM39-239ENST00000494274 GGT6Q6P531 493 aa11.3□□□□□ -0.6
RBM39-239ENST00000494274 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
RBM39-239ENST00000494274 HSPA2P54652 639 aa11.29□□□□□ -0.6
RBM39-239ENST00000494274 KDM5CP41229 1560 aa11.28□□□□□ -0.6
RBM39-239ENST00000494274 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
RBM39-239ENST00000494274 SAMD9LQ8IVG5 1584 aa11.28□□□□□ -0.6
RBM39-239ENST00000494274 ADAMTSL3P82987 1691 aa11.28□□□□□ -0.6
RBM39-239ENST00000494274 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
RBM39-239ENST00000494274 MADDQ8WXG6 1647 aa11.27□□□□□ -0.61
RBM39-239ENST00000494274 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
RBM39-239ENST00000494274 MBD5Q9P267 1494 aa11.26□□□□□ -0.61
RBM39-239ENST00000494274 HECW2Q9P2P5 1572 aa11.26□□□□□ -0.61
RBM39-239ENST00000494274 KIF3BO15066 747 aa11.25□□□□□ -0.61
RBM39-239ENST00000494274 DIP2CQ9Y2E4 1556 aa11.24□□□□□ -0.61
RBM39-239ENST00000494274 MAP3K1Q13233 1512 aa11.24□□□□□ -0.61
RBM39-239ENST00000494274 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
RBM39-239ENST00000494274 DHX29Q7Z478 1369 aaKnown RBP11.23□□□□□ -0.61
RBM39-239ENST00000494274 RTEL1-TNFRSF6BF6WH68 1400 aa11.23□□□□□ -0.61
RBM39-239ENST00000494274 A2MP01023 1474 aa11.23□□□□□ -0.61
RBM39-239ENST00000494274 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
RBM39-239ENST00000494274 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
RBM39-239ENST00000494274 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
RBM39-239ENST00000494274 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
RBM39-239ENST00000494274 SUPT6HQ7KZ85 1726 aaKnown RBP11.21□□□□□ -0.61
RBM39-239ENST00000494274 RIMS1Q86UR5 1692 aaKnown RBP11.21□□□□□ -0.61
RBM39-239ENST00000494274 ABCA6Q8N139 1617 aa11.21□□□□□ -0.61
RBM39-239ENST00000494274 AGLP35573 1532 aa11.21□□□□□ -0.61
RBM39-239ENST00000494274 ATP7AQ04656 1500 aa11.21□□□□□ -0.61
RBM39-239ENST00000494274 CCDC141Q6ZP82 1450 aa11.21□□□□□ -0.61
RBM39-239ENST00000494274 ZMYM3Q14202 1370 aa11.21□□□□□ -0.61
RBM39-239ENST00000494274 MIA2Q96PC5 1412 aa11.2□□□□□ -0.62
RBM39-239ENST00000494274 FAM50AQ14320 339 aaKnown RBP11.2□□□□□ -0.62
RBM39-239ENST00000494274 CHIC2Q9UKJ5 165 aa11.2□□□□□ -0.62
RBM39-239ENST00000494274 PPP6R1Q9UPN7 881 aa11.2□□□□□ -0.62
RBM39-239ENST00000494274 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
RBM39-239ENST00000494274 WASHC2CQ9Y4E1 1318 aa11.19□□□□□ -0.62
RBM39-239ENST00000494274 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
RBM39-239ENST00000494274 REREQ9P2R6 1566 aa11.19□□□□□ -0.62
RBM39-239ENST00000494274 LMTK3Q96Q04 1460 aa11.18□□□□□ -0.62
RBM39-239ENST00000494274 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
RBM39-239ENST00000494274 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
RBM39-239ENST00000494274 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
RBM39-239ENST00000494274 INO80Q9ULG1 1556 aaPredicted RBP11.15□□□□□ -0.62
RBM39-239ENST00000494274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.636e-17■■□□□ 12
RBM39-239ENST00000494274 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
RBM39-239ENST00000494274 ABCC5O15440 1437 aa11.13□□□□□ -0.63
RBM39-239ENST00000494274 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
RBM39-239ENST00000494274 DMRT2Q9Y5R5 561 aa11.13□□□□□ -0.63
RBM39-239ENST00000494274 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
RBM39-239ENST00000494274 ITGAEP38570 1179 aa11.12□□□□□ -0.63
RBM39-239ENST00000494274 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
RBM39-239ENST00000494274 KIF15Q9NS87 1388 aa11.11□□□□□ -0.63
RBM39-239ENST00000494274 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
RBM39-239ENST00000494274 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
RBM39-239ENST00000494274 DAPK1P53355 1430 aa11.09□□□□□ -0.63
RBM39-239ENST00000494274 NPATQ14207 1427 aa11.09□□□□□ -0.63
RBM39-239ENST00000494274 PTPRKQ15262 1439 aa11.09□□□□□ -0.63
RBM39-239ENST00000494274 ANKRD30AQ9BXX3 1397 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms