RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
PDLIM1-203ENST00000490391 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
PDLIM1-203ENST00000490391 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
PDLIM1-203ENST00000490391 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
PDLIM1-203ENST00000490391 SOCS7O14512 581 aa13.14□□□□□ -0.31
PDLIM1-203ENST00000490391 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
PDLIM1-203ENST00000490391 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
PDLIM1-203ENST00000490391 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
PDLIM1-203ENST00000490391 KIF21BO75037 1637 aa13.11□□□□□ -0.31
PDLIM1-203ENST00000490391 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
PDLIM1-203ENST00000490391 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
PDLIM1-203ENST00000490391 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
PDLIM1-203ENST00000490391 PTPRMP28827 1452 aa13.08□□□□□ -0.32
PDLIM1-203ENST00000490391 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 POTEMA6NI47 508 aa13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 IGF1RP08069 1367 aa13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
PDLIM1-203ENST00000490391 ADAMTSL3P82987 1691 aa13.06□□□□□ -0.32
PDLIM1-203ENST00000490391 MAGI3Q5TCQ9 1506 aa13.05□□□□□ -0.32
PDLIM1-203ENST00000490391 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
PDLIM1-203ENST00000490391 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
PDLIM1-203ENST00000490391 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
PDLIM1-203ENST00000490391 DISP3Q9P2K9 1392 aa13.03□□□□□ -0.32
PDLIM1-203ENST00000490391 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
PDLIM1-203ENST00000490391 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
PDLIM1-203ENST00000490391 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
PDLIM1-203ENST00000490391 CFAP43Q8NDM7 1665 aa13.01□□□□□ -0.33
PDLIM1-203ENST00000490391 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
PDLIM1-203ENST00000490391 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 ARAP3Q8WWN8 1544 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
PDLIM1-203ENST00000490391 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
PDLIM1-203ENST00000490391 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
PDLIM1-203ENST00000490391 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
PDLIM1-203ENST00000490391 SPATA31D1Q6ZQQ2 1576 aa12.93□□□□□ -0.34
PDLIM1-203ENST00000490391 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
PDLIM1-203ENST00000490391 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
PDLIM1-203ENST00000490391 HSPA2P54652 639 aa12.91□□□□□ -0.34
PDLIM1-203ENST00000490391 RIMS1Q86UR5 1692 aaKnown RBP12.87□□□□□ -0.35
PDLIM1-203ENST00000490391 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1-203ENST00000490391 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
PDLIM1-203ENST00000490391 ABCA8O94911 1581 aa12.85□□□□□ -0.35
PDLIM1-203ENST00000490391 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
PDLIM1-203ENST00000490391 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
PDLIM1-203ENST00000490391 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
PDLIM1-203ENST00000490391 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
PDLIM1-203ENST00000490391 NEO1Q92859 1461 aa12.79□□□□□ -0.36
PDLIM1-203ENST00000490391 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-203ENST00000490391 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1-203ENST00000490391 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
PDLIM1-203ENST00000490391 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
PDLIM1-203ENST00000490391 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
PDLIM1-203ENST00000490391 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1-203ENST00000490391 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
PDLIM1-203ENST00000490391 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
PDLIM1-203ENST00000490391 TTC37Q6PGP7 1564 aa12.74□□□□□ -0.37
PDLIM1-203ENST00000490391 C7P10643 843 aa12.74□□□□□ -0.37
PDLIM1-203ENST00000490391 YEATS2Q9ULM3 1422 aa12.73□□□□□ -0.37
PDLIM1-203ENST00000490391 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
PDLIM1-203ENST00000490391 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
PDLIM1-203ENST00000490391 ATP10BO94823 1461 aa12.72□□□□□ -0.37
PDLIM1-203ENST00000490391 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
PDLIM1-203ENST00000490391 PREX1Q8TCU6 1659 aa12.71□□□□□ -0.37
PDLIM1-203ENST00000490391 LCE2DQ5TA82 110 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1-203ENST00000490391 FANCAO15360 1455 aa12.71□□□□□ -0.38
PDLIM1-203ENST00000490391 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
PDLIM1-203ENST00000490391 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-203ENST00000490391 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
PDLIM1-203ENST00000490391 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 POGZQ7Z3K3 1410 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 LTBP4Q8N2S1 1624 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
PDLIM1-203ENST00000490391 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 AKNAQ7Z591 1439 aa12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 IQSEC2Q5JU85 1478 aa12.66□□□□□ -0.38
PDLIM1-203ENST00000490391 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
PDLIM1-203ENST00000490391 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
PDLIM1-203ENST00000490391 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
PDLIM1-203ENST00000490391 PTPRTO14522 1441 aa12.64□□□□□ -0.39
PDLIM1-203ENST00000490391 ZFYVE16Q7Z3T8 1539 aa12.64□□□□□ -0.39
PDLIM1-203ENST00000490391 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
PDLIM1-203ENST00000490391 MAGI2Q86UL8 1455 aa12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 MLECQ14165 292 aa12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 SETD1BQ9UPS6 1966 aaKnown RBP12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1-203ENST00000490391 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
PDLIM1-203ENST00000490391 HECW1Q76N89 1606 aa12.59□□□□□ -0.39
PDLIM1-203ENST00000490391 CFAP74Q9C0B2 1584 aa12.57□□□□□ -0.4
PDLIM1-203ENST00000490391 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms