RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
BRD9-208ENST00000489816 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.11
BRD9-208ENST00000489816 WDR62O43379 1518 aa21.95■■□□□ 1.1
BRD9-208ENST00000489816 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
BRD9-208ENST00000489816 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
BRD9-208ENST00000489816 DISP1Q96F81 1524 aa21.94■■□□□ 1.1
BRD9-208ENST00000489816 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
BRD9-208ENST00000489816 CCER2I3L3R5 266 aa21.94■■□□□ 1.1
BRD9-208ENST00000489816 NUP153P49790 1475 aaKnown RBP21.93■■□□□ 1.1
BRD9-208ENST00000489816 KIAA0586Q9BVV6 1533 aa21.92■■□□□ 1.1
BRD9-208ENST00000489816 NEFLP07196 543 aa21.91■■□□□ 1.1
BRD9-208ENST00000489816 ABCC5O15440 1437 aa21.91■■□□□ 1.1
BRD9-208ENST00000489816 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
BRD9-208ENST00000489816 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
BRD9-208ENST00000489816 DAPK1P53355 1430 aa21.9■■□□□ 1.1
BRD9-208ENST00000489816 TSHZ2Q9NRE2 1034 aa21.9■■□□□ 1.1
BRD9-208ENST00000489816 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
BRD9-208ENST00000489816 FAM9BQ8IZU0 186 aa21.89■■□□□ 1.09
BRD9-208ENST00000489816 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
BRD9-208ENST00000489816 KIAA0556O60303 1618 aa21.84■■□□□ 1.09
BRD9-208ENST00000489816 EIF4G3O43432 1585 aaKnown RBP21.83■■□□□ 1.09
BRD9-208ENST00000489816 PKD2Q13563 968 aa21.83■■□□□ 1.09
BRD9-208ENST00000489816 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
BRD9-208ENST00000489816 KDM2AQ9Y2K7 1162 aa21.81■■□□□ 1.08
BRD9-208ENST00000489816 ANKRD30BQ9BXX2 1392 aa21.81■■□□□ 1.08
BRD9-208ENST00000489816 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.085e-7■■■■□ 21.2
BRD9-208ENST00000489816 MRS2Q9HD23 443 aa21.77■■□□□ 1.08
BRD9-208ENST00000489816 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.08
BRD9-208ENST00000489816 GCC2Q8IWJ2 1684 aa21.76■■□□□ 1.07
BRD9-208ENST00000489816 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
BRD9-208ENST00000489816 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
BRD9-208ENST00000489816 KIF7Q2M1P5 1343 aa21.73■■□□□ 1.07
BRD9-208ENST00000489816 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
BRD9-208ENST00000489816 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
BRD9-208ENST00000489816 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
BRD9-208ENST00000489816 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
BRD9-208ENST00000489816 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
BRD9-208ENST00000489816 KIF14Q15058 1648 aa21.72■■□□□ 1.07
BRD9-208ENST00000489816 NCOA1Q15788 1441 aa21.71■■□□□ 1.07
BRD9-208ENST00000489816 ROCK1Q13464 1354 aa21.71■■□□□ 1.07
BRD9-208ENST00000489816 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
BRD9-208ENST00000489816 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
BRD9-208ENST00000489816 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
BRD9-208ENST00000489816 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
BRD9-208ENST00000489816 RPRD2Q5VT52 1461 aaKnown RBP21.69■■□□□ 1.06
BRD9-208ENST00000489816 NUP155O75694 1391 aa21.69■■□□□ 1.06
BRD9-208ENST00000489816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.063e-7■■■□□ 17.2
BRD9-208ENST00000489816 DNMT1P26358 1616 aaKnown RBP21.67■■□□□ 1.06
BRD9-208ENST00000489816 CNTLNQ9NXG0 1405 aa21.65■■□□□ 1.06
BRD9-208ENST00000489816 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
BRD9-208ENST00000489816 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
BRD9-208ENST00000489816 PZPP20742 1482 aa21.64■■□□□ 1.05
BRD9-208ENST00000489816 ANKRD30AQ9BXX3 1397 aa21.63■■□□□ 1.05
BRD9-208ENST00000489816 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
BRD9-208ENST00000489816 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
BRD9-208ENST00000489816 DCAF11Q8TEB1 546 aa21.62■■□□□ 1.05
BRD9-208ENST00000489816 ATP10BO94823 1461 aa21.6■■□□□ 1.05
BRD9-208ENST00000489816 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
BRD9-208ENST00000489816 USP47Q96K76 1375 aa21.58■■□□□ 1.04
BRD9-208ENST00000489816 KIAA1107Q9UPP5 1409 aa21.56■■□□□ 1.04
BRD9-208ENST00000489816 PTPRGP23470 1445 aa21.56■■□□□ 1.04
BRD9-208ENST00000489816 ST20-MTHFSA0A0A6YYL1 179 aa21.54■■□□□ 1.04
BRD9-208ENST00000489816 NUP160Q12769 1436 aa21.54■■□□□ 1.04
BRD9-208ENST00000489816 C9orf84Q5VXU9 1444 aa21.54■■□□□ 1.04
BRD9-208ENST00000489816 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
BRD9-208ENST00000489816 SPATA31E1Q6ZUB1 1445 aa21.53■■□□□ 1.04
BRD9-208ENST00000489816 KIF15Q9NS87 1388 aa21.52■■□□□ 1.04
BRD9-208ENST00000489816 SALL2Q9Y467 1007 aaPredicted RBP21.52■■□□□ 1.03
BRD9-208ENST00000489816 B4GALNT3Q6L9W6 998 aa21.49■■□□□ 1.03
BRD9-208ENST00000489816 NBPF1Q3BBV0 1214 aa21.44■■□□□ 1.02
BRD9-208ENST00000489816 ITSN2Q9NZM3 1697 aa21.44■■□□□ 1.02
BRD9-208ENST00000489816 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
BRD9-208ENST00000489816 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
BRD9-208ENST00000489816 CDC42BPAQ5VT25 1732 aa21.41■■□□□ 1.02
BRD9-208ENST00000489816 ABCA8O94911 1581 aa21.4■■□□□ 1.02
BRD9-208ENST00000489816 ADGRL2O95490 1459 aa21.4■■□□□ 1.02
BRD9-208ENST00000489816 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.01
BRD9-208ENST00000489816 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.01
BRD9-208ENST00000489816 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
BRD9-208ENST00000489816 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
BRD9-208ENST00000489816 ADGBQ8N7X0 1667 aa21.35■■□□□ 1.01
BRD9-208ENST00000489816 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
BRD9-208ENST00000489816 MBD5Q9P267 1494 aa21.33■■□□□ 1.01
BRD9-208ENST00000489816 ADCY10Q96PN6 1610 aa21.32■■□□□ 1
BRD9-208ENST00000489816 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
BRD9-208ENST00000489816 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
BRD9-208ENST00000489816 PPP4R2Q9NY27 417 aa21.31■■□□□ 1
BRD9-208ENST00000489816 CROCC2H7BZ55 1655 aa21.3■■□□□ 1
BRD9-208ENST00000489816 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
BRD9-208ENST00000489816 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
BRD9-208ENST00000489816 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
BRD9-208ENST00000489816 SYCP2Q9BX26 1530 aa21.28■■□□□ 1
BRD9-208ENST00000489816 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
BRD9-208ENST00000489816 CCDC141Q6ZP82 1450 aa21.27■■□□□ 1
BRD9-208ENST00000489816 AFAP1Q8N556 730 aa21.27■■□□□ 1
BRD9-208ENST00000489816 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
BRD9-208ENST00000489816 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
BRD9-208ENST00000489816 KDM5CP41229 1560 aa21.24■□□□□ 0.99
BRD9-208ENST00000489816 FAM135AQ9P2D6 1515 aa21.23■□□□□ 0.99
BRD9-208ENST00000489816 MSH5O43196 834 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms