RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 MAGI2Q86UL8 1455 aa23.87■■□□□ 1.41
TSC22D3-208ENST00000486554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.86■■□□□ 1.41
TSC22D3-208ENST00000486554 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
TSC22D3-208ENST00000486554 CFAP74Q9C0B2 1584 aa23.86■■□□□ 1.41
TSC22D3-208ENST00000486554 HECW1Q76N89 1606 aa23.84■■□□□ 1.41
TSC22D3-208ENST00000486554 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
TSC22D3-208ENST00000486554 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
TSC22D3-208ENST00000486554 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
TSC22D3-208ENST00000486554 NCOA1Q15788 1441 aa23.77■■□□□ 1.4
TSC22D3-208ENST00000486554 C9orf84Q5VXU9 1444 aa23.77■■□□□ 1.4
TSC22D3-208ENST00000486554 ATP10AO60312 1499 aa23.76■■□□□ 1.39
TSC22D3-208ENST00000486554 HSPA1LP34931 641 aa23.76■■□□□ 1.39
TSC22D3-208ENST00000486554 ZNF335Q9H4Z2 1342 aaPredicted RBP23.76■■□□□ 1.39
TSC22D3-208ENST00000486554 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
TSC22D3-208ENST00000486554 RAPGEF6Q8TEU7 1601 aa23.73■■□□□ 1.39
TSC22D3-208ENST00000486554 C3P01024 1663 aa23.69■■□□□ 1.38
TSC22D3-208ENST00000486554 PIP4K2BP78356 416 aa23.67■■□□□ 1.38
TSC22D3-208ENST00000486554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.67■■□□□ 1.38
TSC22D3-208ENST00000486554 SCAPERQ9BY12 1400 aa23.67■■□□□ 1.38
TSC22D3-208ENST00000486554 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
TSC22D3-208ENST00000486554 TRAPPC8Q9Y2L5 1435 aa23.64■■□□□ 1.37
TSC22D3-208ENST00000486554 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
TSC22D3-208ENST00000486554 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
TSC22D3-208ENST00000486554 NCKAP5LQ9HCH0 1330 aa23.61■■□□□ 1.37
TSC22D3-208ENST00000486554 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
TSC22D3-208ENST00000486554 TOM1O60784 492 aa23.53■■□□□ 1.36
TSC22D3-208ENST00000486554 MYT1LQ9UL68 1186 aa23.51■■□□□ 1.35
TSC22D3-208ENST00000486554 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
TSC22D3-208ENST00000486554 PLCH2O75038 1416 aa23.48■■□□□ 1.35
TSC22D3-208ENST00000486554 PKD2Q13563 968 aa23.47■■□□□ 1.35
TSC22D3-208ENST00000486554 DIP2CQ9Y2E4 1556 aa23.47■■□□□ 1.35
TSC22D3-208ENST00000486554 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
TSC22D3-208ENST00000486554 PRXQ9BXM0 1461 aa23.44■■□□□ 1.34
TSC22D3-208ENST00000486554 PPP6R1Q9UPN7 881 aa23.44■■□□□ 1.34
TSC22D3-208ENST00000486554 REREQ9P2R6 1566 aa23.44■■□□□ 1.34
TSC22D3-208ENST00000486554 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
TSC22D3-208ENST00000486554 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
TSC22D3-208ENST00000486554 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
TSC22D3-208ENST00000486554 KDM5CP41229 1560 aa23.42■■□□□ 1.34
TSC22D3-208ENST00000486554 AGLP35573 1532 aa23.42■■□□□ 1.34
TSC22D3-208ENST00000486554 NPATQ14207 1427 aa23.42■■□□□ 1.34
TSC22D3-208ENST00000486554 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
TSC22D3-208ENST00000486554 EFCAB2Q5VUJ9 269 aa23.4■■□□□ 1.34
TSC22D3-208ENST00000486554 AFAP1Q8N556 730 aa23.4■■□□□ 1.34
TSC22D3-208ENST00000486554 TCOF1Q13428 1488 aaKnown RBP23.4■■□□□ 1.34
TSC22D3-208ENST00000486554 ABCA6Q8N139 1617 aa23.39■■□□□ 1.33
TSC22D3-208ENST00000486554 RGS17Q9UGC6 210 aaPredicted RBP23.38■■□□□ 1.33
TSC22D3-208ENST00000486554 CPS1P31327 1500 aa23.37■■□□□ 1.33
TSC22D3-208ENST00000486554 ZNF142P52746 1687 aaPredicted RBP23.36■■□□□ 1.33
TSC22D3-208ENST00000486554 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
TSC22D3-208ENST00000486554 MYO3AQ8NEV4 1616 aa23.34■■□□□ 1.33
TSC22D3-208ENST00000486554 PTPRKQ15262 1439 aa23.33■■□□□ 1.33
TSC22D3-208ENST00000486554 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
TSC22D3-208ENST00000486554 CEP170BQ9Y4F5 1589 aaPredicted RBP23.32■■□□□ 1.32
TSC22D3-208ENST00000486554 RANGAP1P46060 587 aaPredicted RBP23.31■■□□□ 1.32
TSC22D3-208ENST00000486554 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
TSC22D3-208ENST00000486554 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
TSC22D3-208ENST00000486554 ZMYM3Q14202 1370 aa23.29■■□□□ 1.32
TSC22D3-208ENST00000486554 SHANK2Q9UPX8 1470 aa23.28■■□□□ 1.32
TSC22D3-208ENST00000486554 MLH3Q9UHC1 1453 aa23.27■■□□□ 1.32
TSC22D3-208ENST00000486554 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
TSC22D3-208ENST00000486554 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
TSC22D3-208ENST00000486554 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
TSC22D3-208ENST00000486554 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
TSC22D3-208ENST00000486554 POLR1AO95602 1720 aaPredicted RBP23.17■■□□□ 1.3
TSC22D3-208ENST00000486554 KIF14Q15058 1648 aa23.16■■□□□ 1.3
TSC22D3-208ENST00000486554 NEURL4Q96JN8 1562 aa23.16■■□□□ 1.3
TSC22D3-208ENST00000486554 KIDINS220Q9ULH0 1771 aa23.14■■□□□ 1.29
TSC22D3-208ENST00000486554 DNMT1P26358 1616 aaKnown RBP23.13■■□□□ 1.29
TSC22D3-208ENST00000486554 VWDEQ8N2E2 1590 aa23.13■■□□□ 1.29
TSC22D3-208ENST00000486554 A2ML1A8K2U0 1454 aa23.12■■□□□ 1.29
TSC22D3-208ENST00000486554 ABCC1P33527 1531 aa23.08■■□□□ 1.29
TSC22D3-208ENST00000486554 RNF17Q9BXT8 1623 aaKnown RBP23.08■■□□□ 1.29
TSC22D3-208ENST00000486554 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.29
TSC22D3-208ENST00000486554 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
TSC22D3-208ENST00000486554 CDC42BPBQ9Y5S2 1711 aa23.05■■□□□ 1.28
TSC22D3-208ENST00000486554 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
TSC22D3-208ENST00000486554 LRRC7Q96NW7 1537 aa23.02■■□□□ 1.28
TSC22D3-208ENST00000486554 TROQ12816 1431 aaPredicted RBP23■■□□□ 1.27
TSC22D3-208ENST00000486554 CLIP1P30622 1438 aa22.99■■□□□ 1.27
TSC22D3-208ENST00000486554 GGT6Q6P531 493 aa22.99■■□□□ 1.27
TSC22D3-208ENST00000486554 ANKLE2Q86XL3 938 aa22.99■■□□□ 1.27
TSC22D3-208ENST00000486554 UPF1Q92900 1129 aaKnown RBP eCLIP22.99■■□□□ 1.27
TSC22D3-208ENST00000486554 NPHP4O75161 1426 aaPredicted RBP22.98■■□□□ 1.27
TSC22D3-208ENST00000486554 SYNMO15061 1565 aa22.97■■□□□ 1.27
TSC22D3-208ENST00000486554 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
TSC22D3-208ENST00000486554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.97■■□□□ 1.27
TSC22D3-208ENST00000486554 SAMD9LQ8IVG5 1584 aa22.97■■□□□ 1.27
TSC22D3-208ENST00000486554 STRCP1A6NGW2 1772 aa22.96■■□□□ 1.27
TSC22D3-208ENST00000486554 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
TSC22D3-208ENST00000486554 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
TSC22D3-208ENST00000486554 MED14O60244 1454 aa22.92■■□□□ 1.26
TSC22D3-208ENST00000486554 TNRQ92752 1358 aa22.91■■□□□ 1.26
TSC22D3-208ENST00000486554 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
TSC22D3-208ENST00000486554 IQGAP1P46940 1657 aa22.9■■□□□ 1.26
TSC22D3-208ENST00000486554 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
TSC22D3-208ENST00000486554 A2MP01023 1474 aa22.89■■□□□ 1.25
TSC22D3-208ENST00000486554 ATP7AQ04656 1500 aa22.87■■□□□ 1.25
TSC22D3-208ENST00000486554 FBXO31Q5XUX0 539 aaPredicted RBP22.86■■□□□ 1.25
TSC22D3-208ENST00000486554 THEMISQ8N1K5 641 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms