RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 NISCHQ9Y2I1 1504 aa35.46■■■■□ 3.27
TSC22D3-208ENST00000486554 ABCC9O60706 1549 aa33.76■■■■□ 3
TSC22D3-208ENST00000486554 DNAJC5BQ9UF47 199 aa32.81■■■□□ 2.84
TSC22D3-208ENST00000486554 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.78
TSC22D3-208ENST00000486554 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
TSC22D3-208ENST00000486554 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
TSC22D3-208ENST00000486554 DNAJC5Q9H3Z4 198 aa31.08■■■□□ 2.57
TSC22D3-208ENST00000486554 NACADO15069 1562 aa30.94■■■□□ 2.54
TSC22D3-208ENST00000486554 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
TSC22D3-208ENST00000486554 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
TSC22D3-208ENST00000486554 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
TSC22D3-208ENST00000486554 CECR2Q9BXF3 1484 aa30.54■■■□□ 2.48
TSC22D3-208ENST00000486554 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
TSC22D3-208ENST00000486554 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
TSC22D3-208ENST00000486554 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
TSC22D3-208ENST00000486554 EIF4G1Q04637 1599 aaKnown RBP30■■■□□ 2.39
TSC22D3-208ENST00000486554 CUX2O14529 1486 aa29.61■■■□□ 2.33
TSC22D3-208ENST00000486554 SCRIBQ14160 1630 aa29.51■■■□□ 2.31
TSC22D3-208ENST00000486554 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
TSC22D3-208ENST00000486554 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
TSC22D3-208ENST00000486554 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
TSC22D3-208ENST00000486554 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
TSC22D3-208ENST00000486554 NESP48681 1621 aa28.61■■■□□ 2.17
TSC22D3-208ENST00000486554 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
TSC22D3-208ENST00000486554 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
TSC22D3-208ENST00000486554 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
TSC22D3-208ENST00000486554 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
TSC22D3-208ENST00000486554 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
TSC22D3-208ENST00000486554 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
TSC22D3-208ENST00000486554 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
TSC22D3-208ENST00000486554 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
TSC22D3-208ENST00000486554 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
TSC22D3-208ENST00000486554 OSCARQ8IYS5 282 aa28.03■■■□□ 2.08
TSC22D3-208ENST00000486554 BAZ1BQ9UIG0 1483 aaKnown RBP28.01■■■□□ 2.07
TSC22D3-208ENST00000486554 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
TSC22D3-208ENST00000486554 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
TSC22D3-208ENST00000486554 WDR62O43379 1518 aa27.87■■■□□ 2.05
TSC22D3-208ENST00000486554 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
TSC22D3-208ENST00000486554 RIMBP3CA6NJZ7 1639 aa27.84■■■□□ 2.05
TSC22D3-208ENST00000486554 RIMBP3BA6NNM3 1639 aa27.84■■■□□ 2.05
TSC22D3-208ENST00000486554 RIMBP3Q9UFD9 1639 aa27.84■■■□□ 2.05
TSC22D3-208ENST00000486554 TRHP20396 242 aaPredicted RBP27.67■■■□□ 2.02
TSC22D3-208ENST00000486554 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
TSC22D3-208ENST00000486554 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
TSC22D3-208ENST00000486554 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
TSC22D3-208ENST00000486554 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
TSC22D3-208ENST00000486554 CYB5RLQ6IPT4 315 aa27.5■■□□□ 1.99
TSC22D3-208ENST00000486554 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
TSC22D3-208ENST00000486554 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
TSC22D3-208ENST00000486554 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
TSC22D3-208ENST00000486554 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
TSC22D3-208ENST00000486554 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
TSC22D3-208ENST00000486554 CFTRP13569 1480 aa27.06■■□□□ 1.92
TSC22D3-208ENST00000486554 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
TSC22D3-208ENST00000486554 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
TSC22D3-208ENST00000486554 CHD1O14646 1710 aa26.96■■□□□ 1.91
TSC22D3-208ENST00000486554 WIZO95785 1651 aa26.95■■□□□ 1.91
TSC22D3-208ENST00000486554 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
TSC22D3-208ENST00000486554 FBLN2P98095 1184 aa26.85■■□□□ 1.89
TSC22D3-208ENST00000486554 ILDR1Q86SU0 546 aaPredicted RBP26.84■■□□□ 1.89
TSC22D3-208ENST00000486554 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.87
TSC22D3-208ENST00000486554 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
TSC22D3-208ENST00000486554 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
TSC22D3-208ENST00000486554 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
TSC22D3-208ENST00000486554 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
TSC22D3-208ENST00000486554 ABCC8Q09428 1581 aa26.51■■□□□ 1.83
TSC22D3-208ENST00000486554 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
TSC22D3-208ENST00000486554 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
TSC22D3-208ENST00000486554 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
TSC22D3-208ENST00000486554 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
TSC22D3-208ENST00000486554 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
TSC22D3-208ENST00000486554 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
TSC22D3-208ENST00000486554 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
TSC22D3-208ENST00000486554 TDRD9Q8NDG6 1382 aaKnown RBP26.34■■□□□ 1.81
TSC22D3-208ENST00000486554 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
TSC22D3-208ENST00000486554 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
TSC22D3-208ENST00000486554 KDM4FA0A1W2PPD8 638 aa26.24■■□□□ 1.79
TSC22D3-208ENST00000486554 CCDC88BA6NC98 1476 aa26.22■■□□□ 1.79
TSC22D3-208ENST00000486554 SOGA1O94964 1423 aa26.2■■□□□ 1.78
TSC22D3-208ENST00000486554 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
TSC22D3-208ENST00000486554 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
TSC22D3-208ENST00000486554 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
TSC22D3-208ENST00000486554 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
TSC22D3-208ENST00000486554 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
TSC22D3-208ENST00000486554 FGD5Q6ZNL6 1462 aa26.01■■□□□ 1.75
TSC22D3-208ENST00000486554 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.74
TSC22D3-208ENST00000486554 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
TSC22D3-208ENST00000486554 KDM6BO15054 1643 aa25.94■■□□□ 1.74
TSC22D3-208ENST00000486554 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
TSC22D3-208ENST00000486554 ABCC10Q5T3U5 1492 aa25.88■■□□□ 1.73
TSC22D3-208ENST00000486554 HECW2Q9P2P5 1572 aa25.83■■□□□ 1.73
TSC22D3-208ENST00000486554 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
TSC22D3-208ENST00000486554 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
TSC22D3-208ENST00000486554 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
TSC22D3-208ENST00000486554 CUX1P39880 1505 aa25.76■■□□□ 1.71
TSC22D3-208ENST00000486554 ADGRL1O94910 1474 aa25.75■■□□□ 1.71
TSC22D3-208ENST00000486554 NUP160Q12769 1436 aa25.74■■□□□ 1.71
TSC22D3-208ENST00000486554 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
TSC22D3-208ENST00000486554 TSPOAP1O95153 1857 aa25.7■■□□□ 1.71
TSC22D3-208ENST00000486554 MAPKBP1O60336 1514 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms