RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 FRMPD1Q5SYB0 1578 aa14.82□□□□□ -0.04
XRN1-212ENST00000486211 RAPGEF3O95398 923 aa14.82□□□□□ -0.04
XRN1-212ENST00000486211 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
XRN1-212ENST00000486211 POLA2Q14181 598 aa14.79□□□□□ -0.04
XRN1-212ENST00000486211 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
XRN1-212ENST00000486211 ABCA9Q8IUA7 1624 aa14.77□□□□□ -0.04
XRN1-212ENST00000486211 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
XRN1-212ENST00000486211 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
XRN1-212ENST00000486211 NEO1Q92859 1461 aa14.76□□□□□ -0.05
XRN1-212ENST00000486211 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
XRN1-212ENST00000486211 SIGLEC1Q9BZZ2 1709 aa14.71□□□□□ -0.05
XRN1-212ENST00000486211 ATP10BO94823 1461 aa14.7□□□□□ -0.06
XRN1-212ENST00000486211 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
XRN1-212ENST00000486211 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
XRN1-212ENST00000486211 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
XRN1-212ENST00000486211 STRCQ7RTU9 1775 aa14.68□□□□□ -0.06
XRN1-212ENST00000486211 YEATS2Q9ULM3 1422 aa14.67□□□□□ -0.06
XRN1-212ENST00000486211 RICTORQ6R327 1708 aa14.67□□□□□ -0.06
XRN1-212ENST00000486211 CTTNBP2Q8WZ74 1663 aa14.67□□□□□ -0.06
XRN1-212ENST00000486211 POGZQ7Z3K3 1410 aa14.66□□□□□ -0.06
XRN1-212ENST00000486211 FANCAO15360 1455 aa14.65□□□□□ -0.06
XRN1-212ENST00000486211 ARID3CA6NKF2 412 aa14.64□□□□□ -0.07
XRN1-212ENST00000486211 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
XRN1-212ENST00000486211 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
XRN1-212ENST00000486211 FER1L4A9Z1Z3 1794 aa14.63□□□□□ -0.07
XRN1-212ENST00000486211 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
XRN1-212ENST00000486211 AKNAQ7Z591 1439 aa14.63□□□□□ -0.07
XRN1-212ENST00000486211 DENND4BO75064 1496 aaPredicted RBP14.63□□□□□ -0.07
XRN1-212ENST00000486211 ZMYM4Q5VZL5 1548 aa14.62□□□□□ -0.07
XRN1-212ENST00000486211 LTBP4Q8N2S1 1624 aa14.6□□□□□ -0.07
XRN1-212ENST00000486211 ZFYVE16Q7Z3T8 1539 aa14.6□□□□□ -0.07
XRN1-212ENST00000486211 ARHGEF12Q9NZN5 1544 aa14.59□□□□□ -0.07
XRN1-212ENST00000486211 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
XRN1-212ENST00000486211 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.08
XRN1-212ENST00000486211 PTPRTO14522 1441 aa14.58□□□□□ -0.08
XRN1-212ENST00000486211 MLECQ14165 292 aa14.57□□□□□ -0.08
XRN1-212ENST00000486211 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
XRN1-212ENST00000486211 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
XRN1-212ENST00000486211 HECW1Q76N89 1606 aa14.52□□□□□ -0.08
XRN1-212ENST00000486211 CFAP74Q9C0B2 1584 aa14.52□□□□□ -0.08
XRN1-212ENST00000486211 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.08
XRN1-212ENST00000486211 ZBTB22O15209 634 aa14.51□□□□□ -0.09
XRN1-212ENST00000486211 RAPGEF6Q8TEU7 1601 aa14.51□□□□□ -0.09
XRN1-212ENST00000486211 P3H3Q8IVL6 736 aa14.49□□□□□ -0.09
XRN1-212ENST00000486211 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
XRN1-212ENST00000486211 NUP153P49790 1475 aaKnown RBP14.49□□□□□ -0.09
XRN1-212ENST00000486211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.48□□□□□ -0.09
XRN1-212ENST00000486211 ATP10AO60312 1499 aa14.47□□□□□ -0.09
XRN1-212ENST00000486211 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
XRN1-212ENST00000486211 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
XRN1-212ENST00000486211 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
XRN1-212ENST00000486211 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
XRN1-212ENST00000486211 NCOA1Q15788 1441 aa14.44□□□□□ -0.1
XRN1-212ENST00000486211 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
XRN1-212ENST00000486211 MED1Q15648 1581 aaPredicted RBP14.43□□□□□ -0.1
XRN1-212ENST00000486211 SCAPERQ9BY12 1400 aa14.42□□□□□ -0.1
XRN1-212ENST00000486211 C3P01024 1663 aa14.41□□□□□ -0.1
XRN1-212ENST00000486211 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
XRN1-212ENST00000486211 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
XRN1-212ENST00000486211 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
XRN1-212ENST00000486211 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
XRN1-212ENST00000486211 ZNF335Q9H4Z2 1342 aaPredicted RBP14.37□□□□□ -0.11
XRN1-212ENST00000486211 PLCH2O75038 1416 aa14.36□□□□□ -0.11
XRN1-212ENST00000486211 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
XRN1-212ENST00000486211 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
XRN1-212ENST00000486211 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
XRN1-212ENST00000486211 CAMSAP1Q5T5Y3 1602 aa14.34□□□□□ -0.11
XRN1-212ENST00000486211 KDM5CP41229 1560 aa14.33□□□□□ -0.12
XRN1-212ENST00000486211 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
XRN1-212ENST00000486211 HSPA1LP34931 641 aa14.32□□□□□ -0.12
XRN1-212ENST00000486211 ZNF518AQ6AHZ1 1483 aa14.31□□□□□ -0.12
XRN1-212ENST00000486211 AGLP35573 1532 aa14.3□□□□□ -0.12
XRN1-212ENST00000486211 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
XRN1-212ENST00000486211 ABCA6Q8N139 1617 aa14.28□□□□□ -0.12
XRN1-212ENST00000486211 CDK13Q14004 1512 aaKnown RBP14.27□□□□□ -0.12
XRN1-212ENST00000486211 AFAP1Q8N556 730 aa14.27□□□□□ -0.13
XRN1-212ENST00000486211 NPATQ14207 1427 aa14.26□□□□□ -0.13
XRN1-212ENST00000486211 EFCAB2Q5VUJ9 269 aa14.26□□□□□ -0.13
XRN1-212ENST00000486211 PLA2R1Q13018 1463 aa14.25□□□□□ -0.13
XRN1-212ENST00000486211 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
XRN1-212ENST00000486211 MYO5CQ9NQX4 1742 aa14.25□□□□□ -0.13
XRN1-212ENST00000486211 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
XRN1-212ENST00000486211 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
XRN1-212ENST00000486211 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
XRN1-212ENST00000486211 PKD2Q13563 968 aa14.22□□□□□ -0.13
XRN1-212ENST00000486211 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
XRN1-212ENST00000486211 PIP4K2BP78356 416 aa14.21□□□□□ -0.13
XRN1-212ENST00000486211 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
XRN1-212ENST00000486211 MYO3AQ8NEV4 1616 aa14.2□□□□□ -0.14
XRN1-212ENST00000486211 ALKQ9UM73 1620 aa14.2□□□□□ -0.14
XRN1-212ENST00000486211 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
XRN1-212ENST00000486211 KIF14Q15058 1648 aa14.19□□□□□ -0.14
XRN1-212ENST00000486211 CEP170BQ9Y4F5 1589 aaPredicted RBP14.18□□□□□ -0.14
XRN1-212ENST00000486211 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
XRN1-212ENST00000486211 ZMYM3Q14202 1370 aa14.18□□□□□ -0.14
XRN1-212ENST00000486211 TOM1O60784 492 aa14.17□□□□□ -0.14
XRN1-212ENST00000486211 RANGAP1P46060 587 aaPredicted RBP14.17□□□□□ -0.14
XRN1-212ENST00000486211 CPS1P31327 1500 aa14.16□□□□□ -0.14
XRN1-212ENST00000486211 MYT1LQ9UL68 1186 aa14.16□□□□□ -0.14
XRN1-212ENST00000486211 KIDINS220Q9ULH0 1771 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms