RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ERICH6Q7L0X2 663 aa5.97□□□□□ -1.45
SMC6-208ENST00000481708 PRR29P0C7W0 189 aa5.96□□□□□ -1.46
SMC6-208ENST00000481708 HS6ST3Q8IZP7 471 aa5.96□□□□□ -1.46
SMC6-208ENST00000481708 RASEFQ8IZ41 740 aa5.96□□□□□ -1.46
SMC6-208ENST00000481708 C1orf115Q9H7X2 142 aa5.96□□□□□ -1.46
SMC6-208ENST00000481708 TRIM41Q8WV44 630 aa5.95□□□□□ -1.46
SMC6-208ENST00000481708 POLA1P09884 1462 aaPredicted RBP5.95□□□□□ -1.46
SMC6-208ENST00000481708 GSE1Q14687 1217 aa5.95□□□□□ -1.46
SMC6-208ENST00000481708 PITPNM1O00562 1244 aa5.95□□□□□ -1.46
SMC6-208ENST00000481708 UHRF1BP1LA0JNW5 1464 aa5.94□□□□□ -1.46
SMC6-208ENST00000481708 KDM6BO15054 1643 aa5.94□□□□□ -1.46
SMC6-208ENST00000481708 BCORL1Q5H9F3 1711 aa5.94□□□□□ -1.46
SMC6-208ENST00000481708 CCDC88BA6NC98 1476 aa5.94□□□□□ -1.46
SMC6-208ENST00000481708 ERCC6Q03468 1493 aa5.94□□□□□ -1.46
SMC6-208ENST00000481708 DCAF8Q5TAQ9 597 aa5.93□□□□□ -1.46
SMC6-208ENST00000481708 RANGAP1P46060 587 aaPredicted RBP5.93□□□□□ -1.46
SMC6-208ENST00000481708 CFAP43Q8NDM7 1665 aa5.93□□□□□ -1.46
SMC6-208ENST00000481708 SYNJ2O15056 1496 aa5.92□□□□□ -1.46
SMC6-208ENST00000481708 ZNF608Q9ULD9 1512 aaPredicted RBP5.92□□□□□ -1.46
SMC6-208ENST00000481708 RIOK3O14730 519 aaKnown RBP5.92□□□□□ -1.46
SMC6-208ENST00000481708 ADAMTSL3P82987 1691 aa5.92□□□□□ -1.46
SMC6-208ENST00000481708 CTTNBP2Q8WZ74 1663 aa5.91□□□□□ -1.46
SMC6-208ENST00000481708 FAM212AQ96EL1 285 aa5.91□□□□□ -1.46
SMC6-208ENST00000481708 GTPBP6O43824 516 aaPredicted RBP5.89□□□□□ -1.47
SMC6-208ENST00000481708 KIAA0586Q9BVV6 1533 aa5.89□□□□□ -1.47
SMC6-208ENST00000481708 LOC105371045A0A1W2PR82 267 aa5.89□□□□□ -1.47
SMC6-208ENST00000481708 REREQ9P2R6 1566 aa5.89□□□□□ -1.47
SMC6-208ENST00000481708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMC6-208ENST00000481708 PYGBP11216 843 aa5.88□□□□□ -1.47
SMC6-208ENST00000481708 CHRM1P11229 460 aaPredicted RBP5.88□□□□□ -1.47
SMC6-208ENST00000481708 ERCC6L2Q5T890 1561 aa5.87□□□□□ -1.47
SMC6-208ENST00000481708 CHADLQ6NUI6 762 aa5.87□□□□□ -1.47
SMC6-208ENST00000481708 STK25O00506 426 aa5.86□□□□□ -1.47
SMC6-208ENST00000481708 FRMPD1Q5SYB0 1578 aa5.86□□□□□ -1.47
SMC6-208ENST00000481708 FER1L4A9Z1Z3 1794 aa5.86□□□□□ -1.47
SMC6-208ENST00000481708 NECTIN2Q92692 538 aa5.86□□□□□ -1.47
SMC6-208ENST00000481708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.85□□□□□ -1.47
SMC6-208ENST00000481708 ZFP91Q96JP5 570 aaPredicted RBP5.85□□□□□ -1.47
SMC6-208ENST00000481708 VGFO15240 615 aaPredicted RBP5.85□□□□□ -1.47
SMC6-208ENST00000481708 SAMD9Q5K651 1589 aa5.84□□□□□ -1.47
SMC6-208ENST00000481708 LMOD2Q6P5Q4 547 aa5.84□□□□□ -1.48
SMC6-208ENST00000481708 BCL11BQ9C0K0 894 aaPredicted RBP5.84□□□□□ -1.48
SMC6-208ENST00000481708 SIGLEC1Q9BZZ2 1709 aa5.84□□□□□ -1.48
SMC6-208ENST00000481708 GRIN2BQ13224 1484 aa5.83□□□□□ -1.48
SMC6-208ENST00000481708 RICTORQ6R327 1708 aa5.83□□□□□ -1.48
SMC6-208ENST00000481708 SGIP1Q9BQI5 828 aa5.83□□□□□ -1.48
SMC6-208ENST00000481708 ZMYM4Q5VZL5 1548 aa5.83□□□□□ -1.48
SMC6-208ENST00000481708 UGGT2Q9NYU1 1516 aa5.83□□□□□ -1.48
SMC6-208ENST00000481708 KCNV2Q8TDN2 545 aa5.82□□□□□ -1.48
SMC6-208ENST00000481708 ABCA9Q8IUA7 1624 aa5.82□□□□□ -1.48
SMC6-208ENST00000481708 GRIN2AQ12879 1464 aa5.82□□□□□ -1.48
SMC6-208ENST00000481708 STK24Q9Y6E0 443 aa5.81□□□□□ -1.48
SMC6-208ENST00000481708 ZNF142P52746 1687 aaPredicted RBP5.81□□□□□ -1.48
SMC6-208ENST00000481708 ABCC10Q5T3U5 1492 aa5.81□□□□□ -1.48
SMC6-208ENST00000481708 FARP1Q9Y4F1 1045 aaPredicted RBP5.81□□□□□ -1.48
SMC6-208ENST00000481708 MROH2AA6NES4 1674 aa5.81□□□□□ -1.48
SMC6-208ENST00000481708 TSPYL2Q9H2G4 693 aaPredicted RBP5.8□□□□□ -1.48
SMC6-208ENST00000481708 SLC24A3Q9HC58 644 aa5.8□□□□□ -1.48
SMC6-208ENST00000481708 ABCA8O94911 1581 aa5.8□□□□□ -1.48
SMC6-208ENST00000481708 ZCCHC11Q5TAX3 1644 aaKnown RBP5.79□□□□□ -1.48
SMC6-208ENST00000481708 CADPS2Q86UW7 1296 aa5.79□□□□□ -1.48
SMC6-208ENST00000481708 ZC3H15Q8WU90 426 aaKnown RBP5.78□□□□□ -1.48
SMC6-208ENST00000481708 FGD5Q6ZNL6 1462 aa5.78□□□□□ -1.48
SMC6-208ENST00000481708 ARAP3Q8WWN8 1544 aa5.78□□□□□ -1.48
SMC6-208ENST00000481708 SNAPC4Q5SXM2 1469 aa5.78□□□□□ -1.48
SMC6-208ENST00000481708 ARID3AQ99856 593 aa5.78□□□□□ -1.48
SMC6-208ENST00000481708 CCDC61Q9Y6R9 512 aa5.78□□□□□ -1.48
SMC6-208ENST00000481708 ARID3CA6NKF2 412 aa5.77□□□□□ -1.49
SMC6-208ENST00000481708 NEUROD2Q15784 382 aa5.77□□□□□ -1.49
SMC6-208ENST00000481708 PCDHB8Q9UN66 801 aa5.77□□□□□ -1.49
SMC6-208ENST00000481708 PCDHB13Q9Y5F0 798 aa5.77□□□□□ -1.49
SMC6-208ENST00000481708 PRKAR2AP13861 404 aaKnown RBP5.77□□□□□ -1.49
SMC6-208ENST00000481708 FXR2P51116 673 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMC6-208ENST00000481708 LRRIQ1Q96JM4 1722 aa5.76□□□□□ -1.49
SMC6-208ENST00000481708 KIAA0556O60303 1618 aa5.75□□□□□ -1.49
SMC6-208ENST00000481708 TTC37Q6PGP7 1564 aa5.75□□□□□ -1.49
SMC6-208ENST00000481708 ABCC2Q92887 1545 aa5.74□□□□□ -1.49
SMC6-208ENST00000481708 IGSF3O75054 1194 aa5.74□□□□□ -1.49
SMC6-208ENST00000481708 MAGI3Q5TCQ9 1506 aa5.74□□□□□ -1.49
SMC6-208ENST00000481708 CFAP74Q9C0B2 1584 aa5.74□□□□□ -1.49
SMC6-208ENST00000481708 ZMYND15Q9H091 742 aa5.74□□□□□ -1.49
SMC6-208ENST00000481708 GPBP1L1Q9HC44 474 aaPredicted RBP5.74□□□□□ -1.49
SMC6-208ENST00000481708 PCF11O94913 1555 aaKnown RBP5.73□□□□□ -1.49
SMC6-208ENST00000481708 ZNF467Q7Z7K2 595 aaPredicted RBP5.73□□□□□ -1.49
SMC6-208ENST00000481708 PDAP1Q13442 181 aaKnown RBP5.72□□□□□ -1.49
SMC6-208ENST00000481708 MFRPQ9BY79 579 aa5.72□□□□□ -1.49
SMC6-208ENST00000481708 KDM5AP29375 1690 aaKnown RBP5.72□□□□□ -1.49
SMC6-208ENST00000481708 IFNL1Q8IU54 200 aa5.72□□□□□ -1.49
SMC6-208ENST00000481708 IQSEC2Q5JU85 1478 aa5.71□□□□□ -1.49
SMC6-208ENST00000481708 PIP4P2Q8N4L2 257 aa5.71□□□□□ -1.5
SMC6-208ENST00000481708 FAM135AQ9P2D6 1515 aa5.71□□□□□ -1.5
SMC6-208ENST00000481708 DISP1Q96F81 1524 aa5.7□□□□□ -1.5
SMC6-208ENST00000481708 FHAD1B1AJZ9 1412 aa5.7□□□□□ -1.5
SMC6-208ENST00000481708 PSEN1P49768 467 aa5.7□□□□□ -1.5
SMC6-208ENST00000481708 CHRDL2Q6WN34 429 aa5.7□□□□□ -1.5
SMC6-208ENST00000481708 ZNF579Q8NAF0 562 aaKnown RBP5.7□□□□□ -1.5
SMC6-208ENST00000481708 STRCQ7RTU9 1775 aa5.7□□□□□ -1.5
SMC6-208ENST00000481708 MAP3K13O43283 966 aa5.7□□□□□ -1.5
SMC6-208ENST00000481708 RYDENQ9NUL5 291 aaKnown RBP5.69□□□□□ -1.5
SMC6-208ENST00000481708 EPRSP07814 1512 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms