RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
FMR1-211ENST00000478848 EFCAB5A4FU69 1503 aa15.25■□□□□ 0.03
FMR1-211ENST00000478848 ATP10BO94823 1461 aa15.25■□□□□ 0.03
FMR1-211ENST00000478848 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
FMR1-211ENST00000478848 NCKAP5LQ9HCH0 1330 aa15.22■□□□□ 0.03
FMR1-211ENST00000478848 TOM1O60784 492 aa15.22■□□□□ 0.03
FMR1-211ENST00000478848 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
FMR1-211ENST00000478848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
FMR1-211ENST00000478848 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
FMR1-211ENST00000478848 MAGI2Q86UL8 1455 aa15.19■□□□□ 0.02
FMR1-211ENST00000478848 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
FMR1-211ENST00000478848 ATP10AO60312 1499 aa15.16■□□□□ 0.02
FMR1-211ENST00000478848 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
FMR1-211ENST00000478848 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
FMR1-211ENST00000478848 SRCAPQ6ZRS2 3230 aa15.16■□□□□ 0.02
FMR1-211ENST00000478848 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
FMR1-211ENST00000478848 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
FMR1-211ENST00000478848 C9orf84Q5VXU9 1444 aa15.14■□□□□ 0.01
FMR1-211ENST00000478848 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
FMR1-211ENST00000478848 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
FMR1-211ENST00000478848 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
FMR1-211ENST00000478848 C3P01024 1663 aa15.1■□□□□ 0.01
FMR1-211ENST00000478848 POTEAQ6S8J7 498 aa15.1■□□□□ 0.01
FMR1-211ENST00000478848 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
FMR1-211ENST00000478848 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
FMR1-211ENST00000478848 POTEDQ86YR6 584 aa15.08■□□□□ 0
FMR1-211ENST00000478848 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
FMR1-211ENST00000478848 SCAPERQ9BY12 1400 aa15.08■□□□□ 0
FMR1-211ENST00000478848 PKD2Q13563 968 aa15.07■□□□□ 0
FMR1-211ENST00000478848 MYT1LQ9UL68 1186 aa15.03■□□□□ -0
FMR1-211ENST00000478848 SETD1AO15047 1707 aaKnown RBP15.02□□□□□ -0.01
FMR1-211ENST00000478848 PLEKHD1A6NEE1 506 aa15.01□□□□□ -0.01
FMR1-211ENST00000478848 PTPRKQ15262 1439 aa15□□□□□ -0.01
FMR1-211ENST00000478848 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
FMR1-211ENST00000478848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.99□□□□□ -0.01
FMR1-211ENST00000478848 CPS1P31327 1500 aa14.98□□□□□ -0.01
FMR1-211ENST00000478848 TCOF1Q13428 1488 aaKnown RBP14.98□□□□□ -0.01
FMR1-211ENST00000478848 ALKQ9UM73 1620 aa14.98□□□□□ -0.01
FMR1-211ENST00000478848 PLA2R1Q13018 1463 aa14.97□□□□□ -0.01
FMR1-211ENST00000478848 UPF1Q92900 1129 aaKnown RBP eCLIP14.97□□□□□ -0.01
FMR1-211ENST00000478848 FOXD1Q16676 465 aa14.96□□□□□ -0.01
FMR1-211ENST00000478848 NPATQ14207 1427 aa14.95□□□□□ -0.02
FMR1-211ENST00000478848 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
FMR1-211ENST00000478848 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
FMR1-211ENST00000478848 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
FMR1-211ENST00000478848 CNTLNQ9NXG0 1405 aa14.93□□□□□ -0.02
FMR1-211ENST00000478848 NUP153P49790 1475 aaKnown RBP14.93□□□□□ -0.02
FMR1-211ENST00000478848 ZMYM3Q14202 1370 aa14.9□□□□□ -0.02
FMR1-211ENST00000478848 SUPT6HQ7KZ85 1726 aaKnown RBP14.9□□□□□ -0.02
FMR1-211ENST00000478848 PLCH2O75038 1416 aa14.9□□□□□ -0.02
FMR1-211ENST00000478848 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
FMR1-211ENST00000478848 AGLP35573 1532 aa14.89□□□□□ -0.03
FMR1-211ENST00000478848 EFCAB2Q5VUJ9 269 aa14.88□□□□□ -0.03
FMR1-211ENST00000478848 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
FMR1-211ENST00000478848 ZNF518AQ6AHZ1 1483 aa14.88□□□□□ -0.03
FMR1-211ENST00000478848 MYO3AQ8NEV4 1616 aa14.86□□□□□ -0.03
FMR1-211ENST00000478848 ZNF142P52746 1687 aaPredicted RBP14.85□□□□□ -0.03
FMR1-211ENST00000478848 REREQ9P2R6 1566 aa14.85□□□□□ -0.03
FMR1-211ENST00000478848 ABCA6Q8N139 1617 aa14.83□□□□□ -0.04
FMR1-211ENST00000478848 KDM5CP41229 1560 aa14.82□□□□□ -0.04
FMR1-211ENST00000478848 TRIM52Q96A61 297 aa14.82□□□□□ -0.04
FMR1-211ENST00000478848 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
FMR1-211ENST00000478848 MROH2AA6NES4 1674 aa14.79□□□□□ -0.04
FMR1-211ENST00000478848 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
FMR1-211ENST00000478848 MLH3Q9UHC1 1453 aa14.77□□□□□ -0.04
FMR1-211ENST00000478848 LRRC7Q96NW7 1537 aa14.76□□□□□ -0.05
FMR1-211ENST00000478848 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
FMR1-211ENST00000478848 RNF17Q9BXT8 1623 aaKnown RBP14.76□□□□□ -0.05
FMR1-211ENST00000478848 A2ML1A8K2U0 1454 aa14.76□□□□□ -0.05
FMR1-211ENST00000478848 SAMD9Q5K651 1589 aa14.75□□□□□ -0.05
FMR1-211ENST00000478848 POLR1AO95602 1720 aaPredicted RBP14.75□□□□□ -0.05
FMR1-211ENST00000478848 DNMT1P26358 1616 aaKnown RBP14.74□□□□□ -0.05
FMR1-211ENST00000478848 ANKLE2Q86XL3 938 aa14.74□□□□□ -0.05
FMR1-211ENST00000478848 MYO5CQ9NQX4 1742 aa14.72□□□□□ -0.05
FMR1-211ENST00000478848 ARHGAP5Q13017 1502 aa14.72□□□□□ -0.05
FMR1-211ENST00000478848 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
FMR1-211ENST00000478848 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.06
FMR1-211ENST00000478848 NPHP4O75161 1426 aaPredicted RBP14.7□□□□□ -0.06
FMR1-211ENST00000478848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.7□□□□□ -0.06
FMR1-211ENST00000478848 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
FMR1-211ENST00000478848 STRCP1A6NGW2 1772 aa14.68□□□□□ -0.06
FMR1-211ENST00000478848 FAM135BQ49AJ0 1406 aa14.67□□□□□ -0.06
FMR1-211ENST00000478848 GGT6Q6P531 493 aa14.67□□□□□ -0.06
FMR1-211ENST00000478848 ZNF772Q68DY9 489 aaPredicted RBP14.65□□□□□ -0.06
FMR1-211ENST00000478848 KIDINS220Q9ULH0 1771 aa14.65□□□□□ -0.06
FMR1-211ENST00000478848 SYNMO15061 1565 aa14.64□□□□□ -0.07
FMR1-211ENST00000478848 RXRBP28702 533 aa14.64□□□□□ -0.07
FMR1-211ENST00000478848 MEX3CQ5U5Q3 659 aaKnown RBP14.63□□□□□ -0.07
FMR1-211ENST00000478848 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
FMR1-211ENST00000478848 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
FMR1-211ENST00000478848 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
FMR1-211ENST00000478848 MED14O60244 1454 aa14.63□□□□□ -0.07
FMR1-211ENST00000478848 ABCC1P33527 1531 aa14.62□□□□□ -0.07
FMR1-211ENST00000478848 TNRQ92752 1358 aa14.61□□□□□ -0.07
FMR1-211ENST00000478848 ATP1B4Q9UN42 357 aaPredicted RBP14.61□□□□□ -0.07
FMR1-211ENST00000478848 KIF14Q15058 1648 aa14.61□□□□□ -0.07
FMR1-211ENST00000478848 IQGAP1P46940 1657 aa14.6□□□□□ -0.07
FMR1-211ENST00000478848 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
FMR1-211ENST00000478848 RBM33Q96EV2 1170 aaKnown RBP14.59□□□□□ -0.07
FMR1-211ENST00000478848 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms