RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
FMR1-211ENST00000478848 ABCC9O60706 1549 aa21.75■■□□□ 1.07
FMR1-211ENST00000478848 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
FMR1-211ENST00000478848 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
FMR1-211ENST00000478848 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
FMR1-211ENST00000478848 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
FMR1-211ENST00000478848 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
FMR1-211ENST00000478848 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
FMR1-211ENST00000478848 NACADO15069 1562 aa19.68■□□□□ 0.74
FMR1-211ENST00000478848 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
FMR1-211ENST00000478848 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
FMR1-211ENST00000478848 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
FMR1-211ENST00000478848 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.72
FMR1-211ENST00000478848 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
FMR1-211ENST00000478848 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
FMR1-211ENST00000478848 CUX2O14529 1486 aa19.11■□□□□ 0.65
FMR1-211ENST00000478848 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
FMR1-211ENST00000478848 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
FMR1-211ENST00000478848 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
FMR1-211ENST00000478848 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
FMR1-211ENST00000478848 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
FMR1-211ENST00000478848 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
FMR1-211ENST00000478848 NESP48681 1621 aa18.38■□□□□ 0.53
FMR1-211ENST00000478848 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
FMR1-211ENST00000478848 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
FMR1-211ENST00000478848 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
FMR1-211ENST00000478848 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
FMR1-211ENST00000478848 SMARCA2P51531 1590 aa18.18■□□□□ 0.5
FMR1-211ENST00000478848 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
FMR1-211ENST00000478848 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
FMR1-211ENST00000478848 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
FMR1-211ENST00000478848 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
FMR1-211ENST00000478848 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
FMR1-211ENST00000478848 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
FMR1-211ENST00000478848 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
FMR1-211ENST00000478848 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
FMR1-211ENST00000478848 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
FMR1-211ENST00000478848 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
FMR1-211ENST00000478848 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
FMR1-211ENST00000478848 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
FMR1-211ENST00000478848 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
FMR1-211ENST00000478848 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
FMR1-211ENST00000478848 WDR62O43379 1518 aa17.81■□□□□ 0.44
FMR1-211ENST00000478848 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
FMR1-211ENST00000478848 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
FMR1-211ENST00000478848 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
FMR1-211ENST00000478848 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
FMR1-211ENST00000478848 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
FMR1-211ENST00000478848 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
FMR1-211ENST00000478848 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
FMR1-211ENST00000478848 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
FMR1-211ENST00000478848 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
FMR1-211ENST00000478848 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
FMR1-211ENST00000478848 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
FMR1-211ENST00000478848 FBLN2P98095 1184 aa17.29■□□□□ 0.36
FMR1-211ENST00000478848 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
FMR1-211ENST00000478848 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
FMR1-211ENST00000478848 CHD1O14646 1710 aa17.24■□□□□ 0.35
FMR1-211ENST00000478848 CFTRP13569 1480 aa17.18■□□□□ 0.34
FMR1-211ENST00000478848 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
FMR1-211ENST00000478848 KDM4FA0A1W2PPD8 638 aa17.1■□□□□ 0.33
FMR1-211ENST00000478848 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.337e-6■■□□□ 12.2
FMR1-211ENST00000478848 WIZO95785 1651 aa17.01■□□□□ 0.31
FMR1-211ENST00000478848 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
FMR1-211ENST00000478848 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
FMR1-211ENST00000478848 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
FMR1-211ENST00000478848 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
FMR1-211ENST00000478848 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
FMR1-211ENST00000478848 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
FMR1-211ENST00000478848 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
FMR1-211ENST00000478848 FBXO41Q8TF61 875 aa16.85■□□□□ 0.29
FMR1-211ENST00000478848 TDRD9Q8NDG6 1382 aaKnown RBP16.85■□□□□ 0.29
FMR1-211ENST00000478848 KIF13AQ9H1H9 1805 aa16.82■□□□□ 0.28
FMR1-211ENST00000478848 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
FMR1-211ENST00000478848 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
FMR1-211ENST00000478848 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
FMR1-211ENST00000478848 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
FMR1-211ENST00000478848 LMTK3Q96Q04 1460 aa16.78■□□□□ 0.28
FMR1-211ENST00000478848 HECW2Q9P2P5 1572 aa16.77■□□□□ 0.28
FMR1-211ENST00000478848 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
FMR1-211ENST00000478848 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
FMR1-211ENST00000478848 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
FMR1-211ENST00000478848 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
FMR1-211ENST00000478848 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
FMR1-211ENST00000478848 KDM6BO15054 1643 aa16.69■□□□□ 0.26
FMR1-211ENST00000478848 SOGA1O94964 1423 aa16.69■□□□□ 0.26
FMR1-211ENST00000478848 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
FMR1-211ENST00000478848 SOCS7O14512 581 aa16.66■□□□□ 0.26
FMR1-211ENST00000478848 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
FMR1-211ENST00000478848 GRIN2BQ13224 1484 aa16.63■□□□□ 0.25
FMR1-211ENST00000478848 ABCC10Q5T3U5 1492 aa16.62■□□□□ 0.25
FMR1-211ENST00000478848 ILDR2Q71H61 639 aa16.62■□□□□ 0.25
FMR1-211ENST00000478848 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
FMR1-211ENST00000478848 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
FMR1-211ENST00000478848 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
FMR1-211ENST00000478848 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
FMR1-211ENST00000478848 TSPOAP1O95153 1857 aa16.52■□□□□ 0.23
FMR1-211ENST00000478848 DIP2BQ9P265 1576 aa16.51■□□□□ 0.23
FMR1-211ENST00000478848 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
FMR1-211ENST00000478848 DISP3Q9P2K9 1392 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms