RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
DFFB-209ENST00000477548 SNAPC4Q5SXM2 1469 aa18.11■□□□□ 0.49
DFFB-209ENST00000477548 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
DFFB-209ENST00000477548 FYCO1Q9BQS8 1478 aa18.1■□□□□ 0.49
DFFB-209ENST00000477548 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
DFFB-209ENST00000477548 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
DFFB-209ENST00000477548 NEFMP07197 916 aa18.09■□□□□ 0.49
DFFB-209ENST00000477548 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
DFFB-209ENST00000477548 C11orf95C9JLR9 678 aaPredicted RBP18.09■□□□□ 0.49
DFFB-209ENST00000477548 NUDCQ9Y266 331 aa18.08■□□□□ 0.49
DFFB-209ENST00000477548 PTPRKQ15262 1439 aa18.08■□□□□ 0.48
DFFB-209ENST00000477548 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
DFFB-209ENST00000477548 FMN1Q68DA7 1419 aa18.07■□□□□ 0.48
DFFB-209ENST00000477548 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
DFFB-209ENST00000477548 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
DFFB-209ENST00000477548 NAIPQ13075 1403 aa18.06■□□□□ 0.48
DFFB-209ENST00000477548 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
DFFB-209ENST00000477548 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
DFFB-209ENST00000477548 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
DFFB-209ENST00000477548 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
DFFB-209ENST00000477548 RNF123Q5XPI4 1314 aa18.03■□□□□ 0.48
DFFB-209ENST00000477548 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
DFFB-209ENST00000477548 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
DFFB-209ENST00000477548 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
DFFB-209ENST00000477548 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
DFFB-209ENST00000477548 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
DFFB-209ENST00000477548 WDR62O43379 1518 aa17.99■□□□□ 0.47
DFFB-209ENST00000477548 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
DFFB-209ENST00000477548 FBLN2P98095 1184 aa17.98■□□□□ 0.47
DFFB-209ENST00000477548 RRP7BPQ9NSQ0 103 aa17.98■□□□□ 0.47
DFFB-209ENST00000477548 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
DFFB-209ENST00000477548 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
DFFB-209ENST00000477548 MAGI3Q5TCQ9 1506 aa17.97■□□□□ 0.47
DFFB-209ENST00000477548 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
DFFB-209ENST00000477548 WASHC2CQ9Y4E1 1318 aa17.96■□□□□ 0.47
DFFB-209ENST00000477548 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
DFFB-209ENST00000477548 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
DFFB-209ENST00000477548 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
DFFB-209ENST00000477548 PDE4AP27815 886 aa17.94■□□□□ 0.46
DFFB-209ENST00000477548 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
DFFB-209ENST00000477548 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
DFFB-209ENST00000477548 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
DFFB-209ENST00000477548 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
DFFB-209ENST00000477548 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
DFFB-209ENST00000477548 FOXD1Q16676 465 aa17.89■□□□□ 0.46
DFFB-209ENST00000477548 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.46
DFFB-209ENST00000477548 NBPF8Q3BBV2 869 aa17.88■□□□□ 0.45
DFFB-209ENST00000477548 BACH2Q9BYV9 841 aa17.88■□□□□ 0.45
DFFB-209ENST00000477548 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
DFFB-209ENST00000477548 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
DFFB-209ENST00000477548 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
DFFB-209ENST00000477548 GSE1Q14687 1217 aa17.87■□□□□ 0.45
DFFB-209ENST00000477548 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
DFFB-209ENST00000477548 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
DFFB-209ENST00000477548 GRIN2AQ12879 1464 aa17.86■□□□□ 0.45
DFFB-209ENST00000477548 EPRSP07814 1512 aaKnown RBP17.85■□□□□ 0.45
DFFB-209ENST00000477548 RRP1P56182 461 aaKnown RBP17.85■□□□□ 0.45
DFFB-209ENST00000477548 DISP1Q96F81 1524 aa17.85■□□□□ 0.45
DFFB-209ENST00000477548 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
DFFB-209ENST00000477548 MS4A1P11836 297 aa17.84■□□□□ 0.45
DFFB-209ENST00000477548 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
DFFB-209ENST00000477548 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.44
DFFB-209ENST00000477548 DHX29Q7Z478 1369 aaKnown RBP17.83■□□□□ 0.44
DFFB-209ENST00000477548 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
DFFB-209ENST00000477548 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
DFFB-209ENST00000477548 PNISRQ8TF01 805 aaKnown RBP17.82■□□□□ 0.44
DFFB-209ENST00000477548 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
DFFB-209ENST00000477548 EHBP1L1Q8N3D4 1523 aa17.8■□□□□ 0.44
DFFB-209ENST00000477548 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
DFFB-209ENST00000477548 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
DFFB-209ENST00000477548 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
DFFB-209ENST00000477548 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
DFFB-209ENST00000477548 CEP170Q5SW79 1584 aa17.77■□□□□ 0.44
DFFB-209ENST00000477548 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
DFFB-209ENST00000477548 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.43
DFFB-209ENST00000477548 KDM6BO15054 1643 aa17.77■□□□□ 0.43
DFFB-209ENST00000477548 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.43
DFFB-209ENST00000477548 POLR1AO95602 1720 aaPredicted RBP17.77■□□□□ 0.43
DFFB-209ENST00000477548 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
DFFB-209ENST00000477548 RPRD2Q5VT52 1461 aaKnown RBP17.76■□□□□ 0.43
DFFB-209ENST00000477548 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
DFFB-209ENST00000477548 PLB1Q6P1J6 1458 aa17.74■□□□□ 0.43
DFFB-209ENST00000477548 ANKRD30BQ9BXX2 1392 aa17.74■□□□□ 0.43
DFFB-209ENST00000477548 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
DFFB-209ENST00000477548 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
DFFB-209ENST00000477548 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
DFFB-209ENST00000477548 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
DFFB-209ENST00000477548 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
DFFB-209ENST00000477548 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
DFFB-209ENST00000477548 ZNF326Q5BKZ1 582 aaKnown RBP17.71■□□□□ 0.43
DFFB-209ENST00000477548 USP47Q96K76 1375 aa17.7■□□□□ 0.42
DFFB-209ENST00000477548 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
DFFB-209ENST00000477548 SKAP1Q86WV1 359 aa17.69■□□□□ 0.42
DFFB-209ENST00000477548 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
DFFB-209ENST00000477548 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
DFFB-209ENST00000477548 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
DFFB-209ENST00000477548 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
DFFB-209ENST00000477548 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
DFFB-209ENST00000477548 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
DFFB-209ENST00000477548 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms