RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
DFFB-209ENST00000477548 HRCP23327 699 aa22.66■■□□□ 1.22
DFFB-209ENST00000477548 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
DFFB-209ENST00000477548 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
DFFB-209ENST00000477548 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.17
DFFB-209ENST00000477548 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
DFFB-209ENST00000477548 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
DFFB-209ENST00000477548 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
DFFB-209ENST00000477548 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
DFFB-209ENST00000477548 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
DFFB-209ENST00000477548 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
DFFB-209ENST00000477548 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
DFFB-209ENST00000477548 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.06
DFFB-209ENST00000477548 MYT1Q01538 1121 aa21.55■■□□□ 1.04
DFFB-209ENST00000477548 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
DFFB-209ENST00000477548 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
DFFB-209ENST00000477548 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
DFFB-209ENST00000477548 ZEB1P37275 1124 aaPredicted RBP21.36■■□□□ 1.01
DFFB-209ENST00000477548 ABCC9O60706 1549 aa21.25■□□□□ 0.99
DFFB-209ENST00000477548 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
DFFB-209ENST00000477548 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
DFFB-209ENST00000477548 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
DFFB-209ENST00000477548 NACADO15069 1562 aa20.77■□□□□ 0.92
DFFB-209ENST00000477548 GTF3C3Q9Y5Q9 886 aa20.77■□□□□ 0.91
DFFB-209ENST00000477548 CENPBP07199 599 aaPredicted RBP20.73■□□□□ 0.91
DFFB-209ENST00000477548 PRKCSHP14314 528 aaPredicted RBP20.72■□□□□ 0.91
DFFB-209ENST00000477548 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
DFFB-209ENST00000477548 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
DFFB-209ENST00000477548 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
DFFB-209ENST00000477548 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
DFFB-209ENST00000477548 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.9
DFFB-209ENST00000477548 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
DFFB-209ENST00000477548 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
DFFB-209ENST00000477548 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
DFFB-209ENST00000477548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.88
DFFB-209ENST00000477548 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
DFFB-209ENST00000477548 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
DFFB-209ENST00000477548 WIZO95785 1651 aa20.35■□□□□ 0.85
DFFB-209ENST00000477548 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
DFFB-209ENST00000477548 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
DFFB-209ENST00000477548 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
DFFB-209ENST00000477548 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
DFFB-209ENST00000477548 BCL11AQ9H165 835 aa20.14■□□□□ 0.82
DFFB-209ENST00000477548 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
DFFB-209ENST00000477548 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
DFFB-209ENST00000477548 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
DFFB-209ENST00000477548 MIER1Q8N108 512 aa20.03■□□□□ 0.8
DFFB-209ENST00000477548 ERICH6Q7L0X2 663 aa20.02■□□□□ 0.79
DFFB-209ENST00000477548 APLP2Q06481 763 aa20.01■□□□□ 0.79
DFFB-209ENST00000477548 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
DFFB-209ENST00000477548 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
DFFB-209ENST00000477548 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
DFFB-209ENST00000477548 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
DFFB-209ENST00000477548 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
DFFB-209ENST00000477548 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
DFFB-209ENST00000477548 ABCC8Q09428 1581 aa19.83■□□□□ 0.77
DFFB-209ENST00000477548 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
DFFB-209ENST00000477548 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
DFFB-209ENST00000477548 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
DFFB-209ENST00000477548 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
DFFB-209ENST00000477548 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
DFFB-209ENST00000477548 TNIKQ9UKE5 1360 aa19.67■□□□□ 0.74
DFFB-209ENST00000477548 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
DFFB-209ENST00000477548 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
DFFB-209ENST00000477548 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
DFFB-209ENST00000477548 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
DFFB-209ENST00000477548 SOGA1O94964 1423 aa19.59■□□□□ 0.73
DFFB-209ENST00000477548 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
DFFB-209ENST00000477548 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
DFFB-209ENST00000477548 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
DFFB-209ENST00000477548 EEA1Q15075 1411 aa19.45■□□□□ 0.7
DFFB-209ENST00000477548 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
DFFB-209ENST00000477548 SYNJ1O43426 1573 aa19.39■□□□□ 0.7
DFFB-209ENST00000477548 BCANQ96GW7 911 aa19.36■□□□□ 0.69
DFFB-209ENST00000477548 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
DFFB-209ENST00000477548 CLIP1P30622 1438 aa19.29■□□□□ 0.68
DFFB-209ENST00000477548 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
DFFB-209ENST00000477548 FKBP8Q14318 412 aa19.26■□□□□ 0.67
DFFB-209ENST00000477548 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
DFFB-209ENST00000477548 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
DFFB-209ENST00000477548 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
DFFB-209ENST00000477548 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
DFFB-209ENST00000477548 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
DFFB-209ENST00000477548 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
DFFB-209ENST00000477548 NEFLP07196 543 aa19.16■□□□□ 0.66
DFFB-209ENST00000477548 KIF21BO75037 1637 aa19.12■□□□□ 0.65
DFFB-209ENST00000477548 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
DFFB-209ENST00000477548 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
DFFB-209ENST00000477548 CUX1P39880 1505 aa19.07■□□□□ 0.64
DFFB-209ENST00000477548 CFTRP13569 1480 aa19.07■□□□□ 0.64
DFFB-209ENST00000477548 DAXXQ9UER7 740 aaPredicted RBP19.06■□□□□ 0.64
DFFB-209ENST00000477548 ITGAEP38570 1179 aa19.06■□□□□ 0.64
DFFB-209ENST00000477548 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
DFFB-209ENST00000477548 MSH5O43196 834 aa19■□□□□ 0.63
DFFB-209ENST00000477548 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
DFFB-209ENST00000477548 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
DFFB-209ENST00000477548 EIF5BO60841 1220 aaKnown RBP18.98■□□□□ 0.63
DFFB-209ENST00000477548 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
DFFB-209ENST00000477548 TRIM52Q96A61 297 aa18.95■□□□□ 0.62
DFFB-209ENST00000477548 KANK4Q5T7N3 995 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms