RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
RERE-212ENST00000476556 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
RERE-212ENST00000476556 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
RERE-212ENST00000476556 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.33
RERE-212ENST00000476556 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.33
RERE-212ENST00000476556 ST20-MTHFSA0A0A6YYL1 179 aa17.08■□□□□ 0.32
RERE-212ENST00000476556 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
RERE-212ENST00000476556 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
RERE-212ENST00000476556 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
RERE-212ENST00000476556 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
RERE-212ENST00000476556 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
RERE-212ENST00000476556 USP47Q96K76 1375 aa17.06■□□□□ 0.32
RERE-212ENST00000476556 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
RERE-212ENST00000476556 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
RERE-212ENST00000476556 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
RERE-212ENST00000476556 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
RERE-212ENST00000476556 KIF15Q9NS87 1388 aa17.04■□□□□ 0.32
RERE-212ENST00000476556 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
RERE-212ENST00000476556 PDE4AP27815 886 aa17.04■□□□□ 0.32
RERE-212ENST00000476556 PDE3BQ13370 1112 aa17.04■□□□□ 0.32
RERE-212ENST00000476556 GLIPR1L2Q4G1C9 344 aa17.04■□□□□ 0.32
RERE-212ENST00000476556 RRP1P56182 461 aaKnown RBP17.03■□□□□ 0.32
RERE-212ENST00000476556 CUX1P39880 1505 aa17.03■□□□□ 0.32
RERE-212ENST00000476556 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
RERE-212ENST00000476556 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
RERE-212ENST00000476556 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
RERE-212ENST00000476556 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
RERE-212ENST00000476556 PLIN1O60240 522 aa17.02■□□□□ 0.32
RERE-212ENST00000476556 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
RERE-212ENST00000476556 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
RERE-212ENST00000476556 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
RERE-212ENST00000476556 CFTRP13569 1480 aa16.98■□□□□ 0.31
RERE-212ENST00000476556 FYCO1Q9BQS8 1478 aa16.98■□□□□ 0.31
RERE-212ENST00000476556 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
RERE-212ENST00000476556 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
RERE-212ENST00000476556 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.318e-7■■■■□ 20.1
RERE-212ENST00000476556 MSH5O43196 834 aa16.96■□□□□ 0.31
RERE-212ENST00000476556 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
RERE-212ENST00000476556 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
RERE-212ENST00000476556 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
RERE-212ENST00000476556 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
RERE-212ENST00000476556 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
RERE-212ENST00000476556 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
RERE-212ENST00000476556 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
RERE-212ENST00000476556 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
RERE-212ENST00000476556 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
RERE-212ENST00000476556 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
RERE-212ENST00000476556 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
RERE-212ENST00000476556 PANK3Q9H999 370 aa16.92■□□□□ 0.3
RERE-212ENST00000476556 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
RERE-212ENST00000476556 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
RERE-212ENST00000476556 AKNAQ7Z591 1439 aa16.91■□□□□ 0.3
RERE-212ENST00000476556 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
RERE-212ENST00000476556 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
RERE-212ENST00000476556 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
RERE-212ENST00000476556 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
RERE-212ENST00000476556 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
RERE-212ENST00000476556 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
RERE-212ENST00000476556 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
RERE-212ENST00000476556 MS4A1P11836 297 aa16.88■□□□□ 0.29
RERE-212ENST00000476556 NAIPQ13075 1403 aa16.87■□□□□ 0.29
RERE-212ENST00000476556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.87■□□□□ 0.293e-9■□□□□ 9.8
RERE-212ENST00000476556 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
RERE-212ENST00000476556 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
RERE-212ENST00000476556 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
RERE-212ENST00000476556 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
RERE-212ENST00000476556 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
RERE-212ENST00000476556 FAM161AQ3B820 660 aa16.84■□□□□ 0.29
RERE-212ENST00000476556 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
RERE-212ENST00000476556 ARID4BQ4LE39 1312 aaPredicted RBP16.84■□□□□ 0.29
RERE-212ENST00000476556 EFCAB5A4FU69 1503 aa16.84■□□□□ 0.29
RERE-212ENST00000476556 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
RERE-212ENST00000476556 GSE1Q14687 1217 aa16.84■□□□□ 0.29
RERE-212ENST00000476556 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
RERE-212ENST00000476556 HSCBQ8IWL3 235 aa16.82■□□□□ 0.28
RERE-212ENST00000476556 GZF1Q9H116 711 aaPredicted RBP16.82■□□□□ 0.28
RERE-212ENST00000476556 PCF11O94913 1555 aaKnown RBP16.82■□□□□ 0.28
RERE-212ENST00000476556 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
RERE-212ENST00000476556 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
RERE-212ENST00000476556 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
RERE-212ENST00000476556 JPH4Q96JJ6 628 aa16.8■□□□□ 0.28
RERE-212ENST00000476556 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
RERE-212ENST00000476556 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
RERE-212ENST00000476556 BRD4O60885 1362 aaPredicted RBP16.79■□□□□ 0.28
RERE-212ENST00000476556 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
RERE-212ENST00000476556 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
RERE-212ENST00000476556 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
RERE-212ENST00000476556 KANK1Q14678 1352 aa16.78■□□□□ 0.28
RERE-212ENST00000476556 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
RERE-212ENST00000476556 U2AF1L5P0DN76 240 aaPredicted RBP16.77■□□□□ 0.27
RERE-212ENST00000476556 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.27
RERE-212ENST00000476556 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.27
RERE-212ENST00000476556 RSPH4AQ5TD94 716 aa16.77■□□□□ 0.27
RERE-212ENST00000476556 SAFB2Q14151 953 aaKnown RBP eCLIP16.76■□□□□ 0.27
RERE-212ENST00000476556 PMFBP1Q8TBY8 1022 aa16.76■□□□□ 0.27
RERE-212ENST00000476556 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
RERE-212ENST00000476556 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
RERE-212ENST00000476556 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
RERE-212ENST00000476556 APAF1O14727 1248 aa16.75■□□□□ 0.27
RERE-212ENST00000476556 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms