RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
RERE-212ENST00000476556 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
RERE-212ENST00000476556 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
RERE-212ENST00000476556 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
RERE-212ENST00000476556 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
RERE-212ENST00000476556 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
RERE-212ENST00000476556 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
RERE-212ENST00000476556 HRCP23327 699 aa20.77■□□□□ 0.92
RERE-212ENST00000476556 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
RERE-212ENST00000476556 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
RERE-212ENST00000476556 TRIM41Q8WV44 630 aa20.52■□□□□ 0.87
RERE-212ENST00000476556 LOC105371045A0A1W2PR82 267 aa20.44■□□□□ 0.86
RERE-212ENST00000476556 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
RERE-212ENST00000476556 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
RERE-212ENST00000476556 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
RERE-212ENST00000476556 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
RERE-212ENST00000476556 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
RERE-212ENST00000476556 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
RERE-212ENST00000476556 APLP2Q06481 763 aa20.14■□□□□ 0.81
RERE-212ENST00000476556 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
RERE-212ENST00000476556 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
RERE-212ENST00000476556 YTHDC1Q96MU7 727 aaKnown RBP19.89■□□□□ 0.78
RERE-212ENST00000476556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
RERE-212ENST00000476556 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
RERE-212ENST00000476556 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
RERE-212ENST00000476556 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
RERE-212ENST00000476556 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
RERE-212ENST00000476556 MYT1Q01538 1121 aa19.59■□□□□ 0.73
RERE-212ENST00000476556 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
RERE-212ENST00000476556 GTF3C3Q9Y5Q9 886 aa19.43■□□□□ 0.7
RERE-212ENST00000476556 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
RERE-212ENST00000476556 ACIN1Q9UKV3 1341 aaKnown RBP19.34■□□□□ 0.69
RERE-212ENST00000476556 NEFLP07196 543 aa19.28■□□□□ 0.68
RERE-212ENST00000476556 ITGAEP38570 1179 aa19.28■□□□□ 0.68
RERE-212ENST00000476556 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
RERE-212ENST00000476556 ERICH6Q7L0X2 663 aa19.23■□□□□ 0.67
RERE-212ENST00000476556 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
RERE-212ENST00000476556 ABCC9O60706 1549 aa19.2■□□□□ 0.66
RERE-212ENST00000476556 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
RERE-212ENST00000476556 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
RERE-212ENST00000476556 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
RERE-212ENST00000476556 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
RERE-212ENST00000476556 RSF1Q96T23 1441 aaPredicted RBP18.99■□□□□ 0.63
RERE-212ENST00000476556 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
RERE-212ENST00000476556 BCANQ96GW7 911 aa18.86■□□□□ 0.61
RERE-212ENST00000476556 FAM50AQ14320 339 aaKnown RBP18.81■□□□□ 0.6
RERE-212ENST00000476556 MIER1Q8N108 512 aa18.76■□□□□ 0.59
RERE-212ENST00000476556 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
RERE-212ENST00000476556 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
RERE-212ENST00000476556 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
RERE-212ENST00000476556 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
RERE-212ENST00000476556 ANP32CO43423 234 aa18.63■□□□□ 0.57
RERE-212ENST00000476556 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
RERE-212ENST00000476556 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
RERE-212ENST00000476556 CLIP1P30622 1438 aa18.54■□□□□ 0.56
RERE-212ENST00000476556 TNIKQ9UKE5 1360 aa18.51■□□□□ 0.55
RERE-212ENST00000476556 FKBP8Q14318 412 aa18.51■□□□□ 0.55
RERE-212ENST00000476556 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
RERE-212ENST00000476556 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
RERE-212ENST00000476556 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
RERE-212ENST00000476556 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
RERE-212ENST00000476556 EEA1Q15075 1411 aa18.48■□□□□ 0.55
RERE-212ENST00000476556 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
RERE-212ENST00000476556 SOGA1O94964 1423 aa18.38■□□□□ 0.53
RERE-212ENST00000476556 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
RERE-212ENST00000476556 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
RERE-212ENST00000476556 NACADO15069 1562 aa18.34■□□□□ 0.53
RERE-212ENST00000476556 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
RERE-212ENST00000476556 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
RERE-212ENST00000476556 HIRIP3Q9BW71 556 aaPredicted RBP18.29■□□□□ 0.52
RERE-212ENST00000476556 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
RERE-212ENST00000476556 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
RERE-212ENST00000476556 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
RERE-212ENST00000476556 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
RERE-212ENST00000476556 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.51
RERE-212ENST00000476556 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
RERE-212ENST00000476556 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
RERE-212ENST00000476556 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
RERE-212ENST00000476556 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
RERE-212ENST00000476556 WIZO95785 1651 aa18.15■□□□□ 0.5
RERE-212ENST00000476556 IRX6P78412 446 aaPredicted RBP18.13■□□□□ 0.49
RERE-212ENST00000476556 FAM9BQ8IZU0 186 aa18.13■□□□□ 0.49
RERE-212ENST00000476556 VPS8Q8N3P4 1428 aa18.11■□□□□ 0.49
RERE-212ENST00000476556 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
RERE-212ENST00000476556 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
RERE-212ENST00000476556 CHIC2Q9UKJ5 165 aa18.07■□□□□ 0.48
RERE-212ENST00000476556 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
RERE-212ENST00000476556 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
RERE-212ENST00000476556 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
RERE-212ENST00000476556 CCNB3Q8WWL7 1395 aa18.02■□□□□ 0.48
RERE-212ENST00000476556 MRS2Q9HD23 443 aa18■□□□□ 0.47
RERE-212ENST00000476556 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
RERE-212ENST00000476556 MTUS2Q5JR59 1369 aa18■□□□□ 0.47
RERE-212ENST00000476556 KIF27Q86VH2 1401 aa18■□□□□ 0.47
RERE-212ENST00000476556 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
RERE-212ENST00000476556 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
RERE-212ENST00000476556 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
RERE-212ENST00000476556 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
RERE-212ENST00000476556 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
RERE-212ENST00000476556 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms