RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ZNF777Q9ULD5 760 aaPredicted RBP25.82■■□□□ 1.72
CCM2-205ENST00000472223 PREX2Q70Z35 1606 aa25.81■■□□□ 1.72
CCM2-205ENST00000472223 ARAP3Q8WWN8 1544 aa25.81■■□□□ 1.72
CCM2-205ENST00000472223 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
CCM2-205ENST00000472223 CFAP74Q9C0B2 1584 aa25.79■■□□□ 1.72
CCM2-205ENST00000472223 MIA2Q96PC5 1412 aa25.79■■□□□ 1.72
CCM2-205ENST00000472223 CDC42BPBQ9Y5S2 1711 aa25.78■■□□□ 1.72
CCM2-205ENST00000472223 FANCAO15360 1455 aa25.78■■□□□ 1.72
CCM2-205ENST00000472223 FGD6Q6ZV73 1430 aa25.73■■□□□ 1.71
CCM2-205ENST00000472223 NEO1Q92859 1461 aa25.72■■□□□ 1.71
CCM2-205ENST00000472223 PLEKHH2Q8IVE3 1493 aa25.71■■□□□ 1.71
CCM2-205ENST00000472223 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.7
CCM2-205ENST00000472223 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
CCM2-205ENST00000472223 PTPN23Q9H3S7 1636 aa25.68■■□□□ 1.7
CCM2-205ENST00000472223 PPRC1Q5VV67 1664 aaKnown RBP25.68■■□□□ 1.7
CCM2-205ENST00000472223 ADGRL1O94910 1474 aa25.66■■□□□ 1.7
CCM2-205ENST00000472223 CAMSAP2Q08AD1 1489 aa25.65■■□□□ 1.7
CCM2-205ENST00000472223 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
CCM2-205ENST00000472223 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
CCM2-205ENST00000472223 SAMD9LQ8IVG5 1584 aa25.63■■□□□ 1.69
CCM2-205ENST00000472223 SCAPERQ9BY12 1400 aa25.62■■□□□ 1.69
CCM2-205ENST00000472223 RRBP1Q9P2E9 1410 aaKnown RBP25.62■■□□□ 1.69
CCM2-205ENST00000472223 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
CCM2-205ENST00000472223 HNRNPMP52272 730 aaKnown RBP eCLIP25.61■■□□□ 1.692e-6■■■□□ 15.7
CCM2-205ENST00000472223 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
CCM2-205ENST00000472223 ABCC1P33527 1531 aa25.58■■□□□ 1.69
CCM2-205ENST00000472223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCM2-205ENST00000472223 TSPY4P0CV99 314 aa25.57■■□□□ 1.68
CCM2-205ENST00000472223 TSPY10P0CW01 314 aa25.57■■□□□ 1.68
CCM2-205ENST00000472223 DENND4BO75064 1496 aaPredicted RBP25.57■■□□□ 1.68
CCM2-205ENST00000472223 SYCP2Q9BX26 1530 aa25.57■■□□□ 1.68
CCM2-205ENST00000472223 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
CCM2-205ENST00000472223 ITGAEP38570 1179 aa25.52■■□□□ 1.68
CCM2-205ENST00000472223 ZNF518AQ6AHZ1 1483 aa25.52■■□□□ 1.68
CCM2-205ENST00000472223 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
CCM2-205ENST00000472223 CCDC141Q6ZP82 1450 aa25.51■■□□□ 1.67
CCM2-205ENST00000472223 ARHGEF5Q12774 1597 aa25.51■■□□□ 1.67
CCM2-205ENST00000472223 KDM6BO15054 1643 aa25.51■■□□□ 1.67
CCM2-205ENST00000472223 RAPGEF3O95398 923 aa25.5■■□□□ 1.67
CCM2-205ENST00000472223 POGZQ7Z3K3 1410 aa25.49■■□□□ 1.67
CCM2-205ENST00000472223 AFAP1Q8N556 730 aa25.49■■□□□ 1.67
CCM2-205ENST00000472223 ARHGEF12Q9NZN5 1544 aa25.48■■□□□ 1.67
CCM2-205ENST00000472223 MBD5Q9P267 1494 aa25.48■■□□□ 1.67
CCM2-205ENST00000472223 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
CCM2-205ENST00000472223 SPAG9O60271 1321 aaKnown RBP25.47■■□□□ 1.67
CCM2-205ENST00000472223 DNMT1P26358 1616 aaKnown RBP25.47■■□□□ 1.67
CCM2-205ENST00000472223 DAPK1P53355 1430 aa25.46■■□□□ 1.67
CCM2-205ENST00000472223 ABCC5O15440 1437 aa25.44■■□□□ 1.66
CCM2-205ENST00000472223 RICTORQ6R327 1708 aa25.43■■□□□ 1.66
CCM2-205ENST00000472223 CHIC2Q9UKJ5 165 aa25.4■■□□□ 1.66
CCM2-205ENST00000472223 CROCC2H7BZ55 1655 aa25.39■■□□□ 1.66
CCM2-205ENST00000472223 C9orf84Q5VXU9 1444 aa25.39■■□□□ 1.66
CCM2-205ENST00000472223 COL17A1Q9UMD9 1497 aaPredicted RBP25.39■■□□□ 1.65
CCM2-205ENST00000472223 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.65
CCM2-205ENST00000472223 KDM5CP41229 1560 aa25.38■■□□□ 1.65
CCM2-205ENST00000472223 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
CCM2-205ENST00000472223 MAGI2Q86UL8 1455 aa25.37■■□□□ 1.65
CCM2-205ENST00000472223 HECW2Q9P2P5 1572 aa25.36■■□□□ 1.65
CCM2-205ENST00000472223 MLH3Q9UHC1 1453 aa25.36■■□□□ 1.65
CCM2-205ENST00000472223 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
CCM2-205ENST00000472223 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
CCM2-205ENST00000472223 ZMYM4Q5VZL5 1548 aa25.35■■□□□ 1.65
CCM2-205ENST00000472223 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
CCM2-205ENST00000472223 ATP7AQ04656 1500 aa25.34■■□□□ 1.65
CCM2-205ENST00000472223 ADGBQ8N7X0 1667 aa25.33■■□□□ 1.65
CCM2-205ENST00000472223 ZFYVE16Q7Z3T8 1539 aa25.31■■□□□ 1.64
CCM2-205ENST00000472223 ROCK1Q13464 1354 aa25.31■■□□□ 1.64
CCM2-205ENST00000472223 RRP7BPQ9NSQ0 103 aa25.3■■□□□ 1.64
CCM2-205ENST00000472223 INO80Q9ULG1 1556 aaPredicted RBP25.3■■□□□ 1.64
CCM2-205ENST00000472223 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
CCM2-205ENST00000472223 PTPRKQ15262 1439 aa25.28■■□□□ 1.64
CCM2-205ENST00000472223 ADGRL2O95490 1459 aa25.27■■□□□ 1.64
CCM2-205ENST00000472223 NCOA1Q15788 1441 aa25.26■■□□□ 1.63
CCM2-205ENST00000472223 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
CCM2-205ENST00000472223 KIF15Q9NS87 1388 aa25.25■■□□□ 1.63
CCM2-205ENST00000472223 ATP10AO60312 1499 aa25.22■■□□□ 1.63
CCM2-205ENST00000472223 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
CCM2-205ENST00000472223 YEATS2Q9ULM3 1422 aa25.21■■□□□ 1.63
CCM2-205ENST00000472223 ARHGEF40Q8TER5 1519 aa25.21■■□□□ 1.63
CCM2-205ENST00000472223 DUOX2Q9NRD8 1548 aa25.21■■□□□ 1.63
CCM2-205ENST00000472223 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
CCM2-205ENST00000472223 A2MP01023 1474 aa25.2■■□□□ 1.62
CCM2-205ENST00000472223 DIP2CQ9Y2E4 1556 aa25.19■■□□□ 1.62
CCM2-205ENST00000472223 DHX29Q7Z478 1369 aaKnown RBP25.18■■□□□ 1.62
CCM2-205ENST00000472223 HFM1A2PYH4 1435 aa25.16■■□□□ 1.62
CCM2-205ENST00000472223 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
CCM2-205ENST00000472223 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
CCM2-205ENST00000472223 ANKRD50Q9ULJ7 1429 aa25.14■■□□□ 1.62
CCM2-205ENST00000472223 ERBINQ96RT1 1412 aa25.13■■□□□ 1.61
CCM2-205ENST00000472223 GCC2Q8IWJ2 1684 aa25.13■■□□□ 1.61
CCM2-205ENST00000472223 NAIPQ13075 1403 aa25.12■■□□□ 1.61
CCM2-205ENST00000472223 SETD5Q9C0A6 1442 aa25.12■■□□□ 1.61
CCM2-205ENST00000472223 REREQ9P2R6 1566 aa25.11■■□□□ 1.61
CCM2-205ENST00000472223 KIF3BO15066 747 aa25.11■■□□□ 1.61
CCM2-205ENST00000472223 EIF2AK4Q9P2K8 1649 aaKnown RBP25.08■■□□□ 1.6
CCM2-205ENST00000472223 AGLP35573 1532 aa25.05■■□□□ 1.6
CCM2-205ENST00000472223 GGT6Q6P531 493 aa25.04■■□□□ 1.6
CCM2-205ENST00000472223 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
CCM2-205ENST00000472223 HRCP23327 699 aa25.02■■□□□ 1.6
CCM2-205ENST00000472223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms