RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.8
LINC00888-202ENST00000471496 KCNH8Q96L42 1107 aa20.01■□□□□ 0.79
LINC00888-202ENST00000471496 CASKIN1Q8WXD9 1431 aa20■□□□□ 0.79
LINC00888-202ENST00000471496 ABCA9Q8IUA7 1624 aa19.99■□□□□ 0.79
LINC00888-202ENST00000471496 FYCO1Q9BQS8 1478 aa19.96■□□□□ 0.79
LINC00888-202ENST00000471496 CD109Q6YHK3 1445 aa19.95■□□□□ 0.78
LINC00888-202ENST00000471496 ATP1B4Q9UN42 357 aaPredicted RBP19.94■□□□□ 0.78
LINC00888-202ENST00000471496 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
LINC00888-202ENST00000471496 PLEKHD1A6NEE1 506 aa19.93■□□□□ 0.78
LINC00888-202ENST00000471496 ZBTB22O15209 634 aa19.92■□□□□ 0.78
LINC00888-202ENST00000471496 KDM6BO15054 1643 aa19.91■□□□□ 0.78
LINC00888-202ENST00000471496 TEX14Q8IWB6 1497 aa19.91■□□□□ 0.78
LINC00888-202ENST00000471496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.78
LINC00888-202ENST00000471496 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
LINC00888-202ENST00000471496 TTC37Q6PGP7 1564 aa19.89■□□□□ 0.77
LINC00888-202ENST00000471496 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
LINC00888-202ENST00000471496 KIF14Q15058 1648 aa19.87■□□□□ 0.77
LINC00888-202ENST00000471496 TROQ12816 1431 aaPredicted RBP19.86■□□□□ 0.77
LINC00888-202ENST00000471496 ABCB7O75027 752 aa19.84■□□□□ 0.77
LINC00888-202ENST00000471496 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.76
LINC00888-202ENST00000471496 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
LINC00888-202ENST00000471496 MYO5CQ9NQX4 1742 aa19.78■□□□□ 0.76
LINC00888-202ENST00000471496 NEO1Q92859 1461 aa19.78■□□□□ 0.76
LINC00888-202ENST00000471496 ARAP3Q8WWN8 1544 aa19.77■□□□□ 0.76
LINC00888-202ENST00000471496 PLCH2O75038 1416 aa19.75■□□□□ 0.75
LINC00888-202ENST00000471496 PHLDB1Q86UU1 1377 aa19.74■□□□□ 0.75
LINC00888-202ENST00000471496 FANCAO15360 1455 aa19.73■□□□□ 0.75
LINC00888-202ENST00000471496 CFAP74Q9C0B2 1584 aa19.73■□□□□ 0.75
LINC00888-202ENST00000471496 CDC42BPBQ9Y5S2 1711 aa19.73■□□□□ 0.75
LINC00888-202ENST00000471496 CDC42BPAQ5VT25 1732 aa19.72■□□□□ 0.75
LINC00888-202ENST00000471496 TIAM1Q13009 1591 aa19.71■□□□□ 0.75
LINC00888-202ENST00000471496 ATXN8OSP0DMR3 200 aa19.71■□□□□ 0.75
LINC00888-202ENST00000471496 PREX2Q70Z35 1606 aa19.7■□□□□ 0.74
LINC00888-202ENST00000471496 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
LINC00888-202ENST00000471496 FRMPD1Q5SYB0 1578 aa19.7■□□□□ 0.74
LINC00888-202ENST00000471496 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
LINC00888-202ENST00000471496 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
LINC00888-202ENST00000471496 MTUS2Q5JR59 1369 aa19.67■□□□□ 0.74
LINC00888-202ENST00000471496 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
LINC00888-202ENST00000471496 POLA2Q14181 598 aa19.65■□□□□ 0.74
LINC00888-202ENST00000471496 ARHGAP5Q13017 1502 aa19.64■□□□□ 0.74
LINC00888-202ENST00000471496 RAPGEF3O95398 923 aa19.64■□□□□ 0.73
LINC00888-202ENST00000471496 ATF5Q9Y2D1 282 aaPredicted RBP19.64■□□□□ 0.73
LINC00888-202ENST00000471496 GPATCH8Q9UKJ3 1502 aaKnown RBP19.64■□□□□ 0.73
LINC00888-202ENST00000471496 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
LINC00888-202ENST00000471496 DENND4BO75064 1496 aaPredicted RBP19.62■□□□□ 0.73
LINC00888-202ENST00000471496 ADGRL1O94910 1474 aa19.62■□□□□ 0.73
LINC00888-202ENST00000471496 LRRC9Q6ZRR7 1453 aa19.61■□□□□ 0.73
LINC00888-202ENST00000471496 SUPT6HQ7KZ85 1726 aaKnown RBP19.6■□□□□ 0.73
LINC00888-202ENST00000471496 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
LINC00888-202ENST00000471496 ZMYM4Q5VZL5 1548 aa19.58■□□□□ 0.72
LINC00888-202ENST00000471496 SAMD9LQ8IVG5 1584 aa19.57■□□□□ 0.72
LINC00888-202ENST00000471496 ABCC1P33527 1531 aa19.57■□□□□ 0.72
LINC00888-202ENST00000471496 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
LINC00888-202ENST00000471496 POGZQ7Z3K3 1410 aa19.57■□□□□ 0.72
LINC00888-202ENST00000471496 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
LINC00888-202ENST00000471496 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
LINC00888-202ENST00000471496 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
LINC00888-202ENST00000471496 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
LINC00888-202ENST00000471496 KDM5CP41229 1560 aa19.52■□□□□ 0.72
LINC00888-202ENST00000471496 ARHGEF40Q8TER5 1519 aa19.51■□□□□ 0.71
LINC00888-202ENST00000471496 ZNF518AQ6AHZ1 1483 aa19.5■□□□□ 0.71
LINC00888-202ENST00000471496 TRAPPC8Q9Y2L5 1435 aa19.5■□□□□ 0.71
LINC00888-202ENST00000471496 CFDP1Q9UEE9 299 aaPredicted RBP19.49■□□□□ 0.71
LINC00888-202ENST00000471496 MAGI2Q86UL8 1455 aa19.49■□□□□ 0.71
LINC00888-202ENST00000471496 SYCP2Q9BX26 1530 aa19.48■□□□□ 0.71
LINC00888-202ENST00000471496 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
LINC00888-202ENST00000471496 YEATS2Q9ULM3 1422 aa19.48■□□□□ 0.71
LINC00888-202ENST00000471496 ZFYVE16Q7Z3T8 1539 aa19.48■□□□□ 0.71
LINC00888-202ENST00000471496 SIGLEC1Q9BZZ2 1709 aa19.47■□□□□ 0.71
LINC00888-202ENST00000471496 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
LINC00888-202ENST00000471496 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
LINC00888-202ENST00000471496 KIAA1107Q9UPP5 1409 aa19.46■□□□□ 0.71
LINC00888-202ENST00000471496 ZBTB12Q9Y330 459 aaPredicted RBP19.46■□□□□ 0.71
LINC00888-202ENST00000471496 ZNF644Q9H582 1327 aaPredicted RBP19.46■□□□□ 0.71
LINC00888-202ENST00000471496 HECW2Q9P2P5 1572 aa19.45■□□□□ 0.7
LINC00888-202ENST00000471496 PLEKHH2Q8IVE3 1493 aa19.44■□□□□ 0.7
LINC00888-202ENST00000471496 KIDINS220Q9ULH0 1771 aa19.43■□□□□ 0.7
LINC00888-202ENST00000471496 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
LINC00888-202ENST00000471496 HNRNPMP52272 730 aaKnown RBP eCLIP19.42■□□□□ 0.7
LINC00888-202ENST00000471496 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
LINC00888-202ENST00000471496 ABCA6Q8N139 1617 aa19.41■□□□□ 0.7
LINC00888-202ENST00000471496 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
LINC00888-202ENST00000471496 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
LINC00888-202ENST00000471496 MYOM3Q5VTT5 1437 aa19.4■□□□□ 0.7
LINC00888-202ENST00000471496 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
LINC00888-202ENST00000471496 BCORL1Q5H9F3 1711 aa19.38■□□□□ 0.69
LINC00888-202ENST00000471496 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
LINC00888-202ENST00000471496 ATP10AO60312 1499 aa19.37■□□□□ 0.69
LINC00888-202ENST00000471496 ADAMTSL3P82987 1691 aa19.37■□□□□ 0.69
LINC00888-202ENST00000471496 MIA2Q96PC5 1412 aa19.37■□□□□ 0.69
LINC00888-202ENST00000471496 REREQ9P2R6 1566 aa19.36■□□□□ 0.69
LINC00888-202ENST00000471496 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
LINC00888-202ENST00000471496 ARHGEF5Q12774 1597 aa19.34■□□□□ 0.69
LINC00888-202ENST00000471496 ATP7AQ04656 1500 aa19.34■□□□□ 0.69
LINC00888-202ENST00000471496 SPAG9O60271 1321 aaKnown RBP19.32■□□□□ 0.68
LINC00888-202ENST00000471496 PTPN23Q9H3S7 1636 aa19.31■□□□□ 0.68
LINC00888-202ENST00000471496 CCDC141Q6ZP82 1450 aa19.31■□□□□ 0.68
LINC00888-202ENST00000471496 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
LINC00888-202ENST00000471496 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms