RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PDE4AP27815 886 aa10.67□□□□□ -0.7
TPM3-215ENST00000469717 NCAPD3P42695 1498 aa10.67□□□□□ -0.7
TPM3-215ENST00000469717 RNF123Q5XPI4 1314 aa10.66□□□□□ -0.7
TPM3-215ENST00000469717 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
TPM3-215ENST00000469717 WASHC2CQ9Y4E1 1318 aa10.64□□□□□ -0.71
TPM3-215ENST00000469717 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
TPM3-215ENST00000469717 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
TPM3-215ENST00000469717 KDM6BO15054 1643 aa10.63□□□□□ -0.71
TPM3-215ENST00000469717 FMN1Q68DA7 1419 aa10.63□□□□□ -0.71
TPM3-215ENST00000469717 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
TPM3-215ENST00000469717 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
TPM3-215ENST00000469717 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
TPM3-215ENST00000469717 FRAT1Q92837 279 aaPredicted RBP10.62□□□□□ -0.71
TPM3-215ENST00000469717 MPHOSPH9Q99550 1183 aa10.62□□□□□ -0.71
TPM3-215ENST00000469717 PLIN1O60240 522 aa10.62□□□□□ -0.71
TPM3-215ENST00000469717 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
TPM3-215ENST00000469717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.61□□□□□ -0.713e-7■■□□□ 11.8
TPM3-215ENST00000469717 GSE1Q14687 1217 aa10.6□□□□□ -0.71
TPM3-215ENST00000469717 NFKBIBQ15653 356 aa10.6□□□□□ -0.71
TPM3-215ENST00000469717 DHX29Q7Z478 1369 aaKnown RBP10.6□□□□□ -0.71
TPM3-215ENST00000469717 RRP1P56182 461 aaKnown RBP10.6□□□□□ -0.71
TPM3-215ENST00000469717 FYCO1Q9BQS8 1478 aa10.59□□□□□ -0.71
TPM3-215ENST00000469717 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
TPM3-215ENST00000469717 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
TPM3-215ENST00000469717 CFTRP13569 1480 aa10.59□□□□□ -0.71
TPM3-215ENST00000469717 NESP48681 1621 aa10.59□□□□□ -0.71
TPM3-215ENST00000469717 TMC1Q8TDI8 760 aa10.59□□□□□ -0.71
TPM3-215ENST00000469717 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
TPM3-215ENST00000469717 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
TPM3-215ENST00000469717 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
TPM3-215ENST00000469717 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
TPM3-215ENST00000469717 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
TPM3-215ENST00000469717 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
TPM3-215ENST00000469717 MYOM3Q5VTT5 1437 aa10.57□□□□□ -0.72
TPM3-215ENST00000469717 SPATA31E1Q6ZUB1 1445 aa10.56□□□□□ -0.72
TPM3-215ENST00000469717 DCAF11Q8TEB1 546 aa10.56□□□□□ -0.72
TPM3-215ENST00000469717 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
TPM3-215ENST00000469717 RCAN3Q9UKA8 241 aa10.55□□□□□ -0.72
TPM3-215ENST00000469717 FRAT2O75474 233 aaPredicted RBP10.54□□□□□ -0.72
TPM3-215ENST00000469717 LRRIQ1Q96JM4 1722 aa10.54□□□□□ -0.72
TPM3-215ENST00000469717 SNAPC4Q5SXM2 1469 aa10.53□□□□□ -0.72
TPM3-215ENST00000469717 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM3-215ENST00000469717 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
TPM3-215ENST00000469717 BCORL1Q5H9F3 1711 aa10.52□□□□□ -0.72
TPM3-215ENST00000469717 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
TPM3-215ENST00000469717 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
TPM3-215ENST00000469717 C20orf194Q5TEA3 1177 aa10.52□□□□□ -0.73
TPM3-215ENST00000469717 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
TPM3-215ENST00000469717 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
TPM3-215ENST00000469717 ARXQ96QS3 562 aa10.5□□□□□ -0.73
TPM3-215ENST00000469717 SENP3Q9H4L4 574 aaPredicted RBP10.5□□□□□ -0.73
TPM3-215ENST00000469717 ANKRD30BQ9BXX2 1392 aa10.5□□□□□ -0.73
TPM3-215ENST00000469717 MAGI3Q5TCQ9 1506 aa10.5□□□□□ -0.73
TPM3-215ENST00000469717 HECW1Q76N89 1606 aa10.5□□□□□ -0.73
TPM3-215ENST00000469717 USP47Q96K76 1375 aa10.5□□□□□ -0.73
TPM3-215ENST00000469717 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
TPM3-215ENST00000469717 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
TPM3-215ENST00000469717 MS4A1P11836 297 aa10.49□□□□□ -0.73
TPM3-215ENST00000469717 ZNF644Q9H582 1327 aaPredicted RBP10.48□□□□□ -0.73
TPM3-215ENST00000469717 ABCA5Q8WWZ7 1642 aa10.47□□□□□ -0.73
TPM3-215ENST00000469717 RGS3P49796 1198 aa10.46□□□□□ -0.74
TPM3-215ENST00000469717 DDRGK1Q96HY6 314 aa10.46□□□□□ -0.74
TPM3-215ENST00000469717 POGKQ9P215 609 aa10.46□□□□□ -0.74
TPM3-215ENST00000469717 LRPPRCP42704 1394 aaKnown RBP10.45□□□□□ -0.74
TPM3-215ENST00000469717 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
TPM3-215ENST00000469717 SUPT6HQ7KZ85 1726 aaKnown RBP10.45□□□□□ -0.74
TPM3-215ENST00000469717 GCC2Q8IWJ2 1684 aa10.45□□□□□ -0.74
TPM3-215ENST00000469717 POLR1AO95602 1720 aaPredicted RBP10.45□□□□□ -0.74
TPM3-215ENST00000469717 RRAGDQ9NQL2 400 aaPredicted RBP10.44□□□□□ -0.74
TPM3-215ENST00000469717 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
TPM3-215ENST00000469717 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
TPM3-215ENST00000469717 ST20-MTHFSA0A0A6YYL1 179 aa10.43□□□□□ -0.74
TPM3-215ENST00000469717 C8orf34Q49A92 452 aa10.43□□□□□ -0.74
TPM3-215ENST00000469717 GRIN2BQ13224 1484 aa10.43□□□□□ -0.74
TPM3-215ENST00000469717 MYBBP1AQ9BQG0 1328 aaKnown RBP10.42□□□□□ -0.74
TPM3-215ENST00000469717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.744e-9■■■■■ 28.1
TPM3-215ENST00000469717 CARD11Q9BXL7 1154 aa10.42□□□□□ -0.74
TPM3-215ENST00000469717 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
TPM3-215ENST00000469717 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
TPM3-215ENST00000469717 FAM43AQ8N2R8 423 aa10.41□□□□□ -0.74
TPM3-215ENST00000469717 CC2D1BQ5T0F9 858 aaKnown RBP10.41□□□□□ -0.74
TPM3-215ENST00000469717 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
TPM3-215ENST00000469717 EHBP1L1Q8N3D4 1523 aa10.41□□□□□ -0.74
TPM3-215ENST00000469717 PRDM2Q13029 1718 aa10.4□□□□□ -0.74
TPM3-215ENST00000469717 KIF15Q9NS87 1388 aa10.4□□□□□ -0.74
TPM3-215ENST00000469717 CTTNBP2Q8WZ74 1663 aa10.4□□□□□ -0.74
TPM3-215ENST00000469717 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
TPM3-215ENST00000469717 CDK13Q14004 1512 aaKnown RBP10.4□□□□□ -0.75
TPM3-215ENST00000469717 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
TPM3-215ENST00000469717 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
TPM3-215ENST00000469717 KDM2BQ8NHM5 1336 aa10.39□□□□□ -0.75
TPM3-215ENST00000469717 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
TPM3-215ENST00000469717 PKD2Q13563 968 aa10.38□□□□□ -0.75
TPM3-215ENST00000469717 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
TPM3-215ENST00000469717 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
TPM3-215ENST00000469717 PLEKHD1A6NEE1 506 aa10.37□□□□□ -0.75
TPM3-215ENST00000469717 KDM5CP41229 1560 aa10.37□□□□□ -0.75
TPM3-215ENST00000469717 SEC24BO95487 1268 aa10.37□□□□□ -0.75
TPM3-215ENST00000469717 VSIG10Q8N0Z9 540 aa10.37□□□□□ -0.75
TPM3-215ENST00000469717 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms