RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 ATP10BO94823 1461 aa11.32□□□□□ -0.6
MSL3-210ENST00000468149 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
MSL3-210ENST00000468149 MAP3K4Q9Y6R4 1608 aa11.32□□□□□ -0.6
MSL3-210ENST00000468149 LRRIQ1Q96JM4 1722 aa11.31□□□□□ -0.6
MSL3-210ENST00000468149 NBR1Q14596 966 aa11.31□□□□□ -0.6
MSL3-210ENST00000468149 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
MSL3-210ENST00000468149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
MSL3-210ENST00000468149 CFAP43Q8NDM7 1665 aa11.31□□□□□ -0.6
MSL3-210ENST00000468149 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
MSL3-210ENST00000468149 CLIP1P30622 1438 aa11.3□□□□□ -0.6
MSL3-210ENST00000468149 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
MSL3-210ENST00000468149 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
MSL3-210ENST00000468149 PPRC1Q5VV67 1664 aaKnown RBP11.29□□□□□ -0.6
MSL3-210ENST00000468149 PCF11O94913 1555 aaKnown RBP11.26□□□□□ -0.61
MSL3-210ENST00000468149 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
MSL3-210ENST00000468149 ABCA9Q8IUA7 1624 aa11.26□□□□□ -0.61
MSL3-210ENST00000468149 PKD2Q13563 968 aa11.26□□□□□ -0.61
MSL3-210ENST00000468149 CASKIN1Q8WXD9 1431 aa11.25□□□□□ -0.61
MSL3-210ENST00000468149 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
MSL3-210ENST00000468149 CDK13Q14004 1512 aaKnown RBP11.24□□□□□ -0.61
MSL3-210ENST00000468149 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
MSL3-210ENST00000468149 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
MSL3-210ENST00000468149 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
MSL3-210ENST00000468149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
MSL3-210ENST00000468149 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
MSL3-210ENST00000468149 TEX14Q8IWB6 1497 aa11.22□□□□□ -0.61
MSL3-210ENST00000468149 PLEKHD1A6NEE1 506 aa11.21□□□□□ -0.61
MSL3-210ENST00000468149 APLP2Q06481 763 aa11.21□□□□□ -0.61
MSL3-210ENST00000468149 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
MSL3-210ENST00000468149 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
MSL3-210ENST00000468149 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
MSL3-210ENST00000468149 KDM6BO15054 1643 aa11.2□□□□□ -0.62
MSL3-210ENST00000468149 MAGI3Q5TCQ9 1506 aa11.2□□□□□ -0.62
MSL3-210ENST00000468149 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
MSL3-210ENST00000468149 KCNH8Q96L42 1107 aa11.2□□□□□ -0.62
MSL3-210ENST00000468149 CD109Q6YHK3 1445 aa11.19□□□□□ -0.62
MSL3-210ENST00000468149 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
MSL3-210ENST00000468149 MYO5CQ9NQX4 1742 aa11.19□□□□□ -0.62
MSL3-210ENST00000468149 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
MSL3-210ENST00000468149 KIF14Q15058 1648 aa11.18□□□□□ -0.62
MSL3-210ENST00000468149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.18□□□□□ -0.62
MSL3-210ENST00000468149 TTC37Q6PGP7 1564 aa11.17□□□□□ -0.62
MSL3-210ENST00000468149 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
MSL3-210ENST00000468149 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
MSL3-210ENST00000468149 TROQ12816 1431 aaPredicted RBP11.16□□□□□ -0.62
MSL3-210ENST00000468149 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
MSL3-210ENST00000468149 VPS8Q8N3P4 1428 aa11.14□□□□□ -0.63
MSL3-210ENST00000468149 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
MSL3-210ENST00000468149 NEO1Q92859 1461 aa11.13□□□□□ -0.63
MSL3-210ENST00000468149 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
MSL3-210ENST00000468149 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
MSL3-210ENST00000468149 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
MSL3-210ENST00000468149 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
MSL3-210ENST00000468149 PHLDB1Q86UU1 1377 aa11.12□□□□□ -0.63
MSL3-210ENST00000468149 PREX2Q70Z35 1606 aa11.11□□□□□ -0.63
MSL3-210ENST00000468149 TIAM1Q13009 1591 aa11.1□□□□□ -0.63
MSL3-210ENST00000468149 COL17A1Q9UMD9 1497 aaPredicted RBP11.1□□□□□ -0.63
MSL3-210ENST00000468149 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
MSL3-210ENST00000468149 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
MSL3-210ENST00000468149 EHBP1L1Q8N3D4 1523 aa11.09□□□□□ -0.63
MSL3-210ENST00000468149 PLCH2O75038 1416 aa11.09□□□□□ -0.63
MSL3-210ENST00000468149 FANCAO15360 1455 aa11.09□□□□□ -0.63
MSL3-210ENST00000468149 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
MSL3-210ENST00000468149 PELP1Q8IZL8 1130 aaKnown RBP11.09□□□□□ -0.63
MSL3-210ENST00000468149 SUPT6HQ7KZ85 1726 aaKnown RBP11.08□□□□□ -0.64
MSL3-210ENST00000468149 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
MSL3-210ENST00000468149 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
MSL3-210ENST00000468149 AKNAQ7Z591 1439 aa11.06□□□□□ -0.64
MSL3-210ENST00000468149 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
MSL3-210ENST00000468149 ARHGAP5Q13017 1502 aa11.05□□□□□ -0.64
MSL3-210ENST00000468149 FRMPD1Q5SYB0 1578 aa11.05□□□□□ -0.64
MSL3-210ENST00000468149 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
MSL3-210ENST00000468149 LRRC9Q6ZRR7 1453 aa11.03□□□□□ -0.64
MSL3-210ENST00000468149 DENND4BO75064 1496 aaPredicted RBP11.02□□□□□ -0.65
MSL3-210ENST00000468149 GPATCH8Q9UKJ3 1502 aaKnown RBP11.02□□□□□ -0.65
MSL3-210ENST00000468149 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
MSL3-210ENST00000468149 ZMYM4Q5VZL5 1548 aa11.01□□□□□ -0.65
MSL3-210ENST00000468149 ABCC1P33527 1531 aa11.01□□□□□ -0.65
MSL3-210ENST00000468149 SAMD9LQ8IVG5 1584 aa11□□□□□ -0.65
MSL3-210ENST00000468149 NCOA2Q15596 1464 aa10.99□□□□□ -0.65
MSL3-210ENST00000468149 CCNB3Q8WWL7 1395 aa10.99□□□□□ -0.65
MSL3-210ENST00000468149 KDM5CP41229 1560 aa10.99□□□□□ -0.65
MSL3-210ENST00000468149 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
MSL3-210ENST00000468149 POGZQ7Z3K3 1410 aa10.99□□□□□ -0.65
MSL3-210ENST00000468149 SCAPERQ9BY12 1400 aa10.99□□□□□ -0.65
MSL3-210ENST00000468149 RAPGEF3O95398 923 aa10.98□□□□□ -0.65
MSL3-210ENST00000468149 MAGI2Q86UL8 1455 aa10.98□□□□□ -0.65
MSL3-210ENST00000468149 MYT1Q01538 1121 aa10.98□□□□□ -0.65
MSL3-210ENST00000468149 ARHGEF40Q8TER5 1519 aa10.97□□□□□ -0.65
MSL3-210ENST00000468149 HECW2Q9P2P5 1572 aa10.96□□□□□ -0.65
MSL3-210ENST00000468149 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.65
MSL3-210ENST00000468149 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
MSL3-210ENST00000468149 CFDP1Q9UEE9 299 aaPredicted RBP10.95□□□□□ -0.66
MSL3-210ENST00000468149 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
MSL3-210ENST00000468149 SYCP2Q9BX26 1530 aa10.95□□□□□ -0.66
MSL3-210ENST00000468149 ARHGEF12Q9NZN5 1544 aa10.95□□□□□ -0.66
MSL3-210ENST00000468149 KANK4Q5T7N3 995 aaPredicted RBP10.95□□□□□ -0.66
MSL3-210ENST00000468149 ZFYVE16Q7Z3T8 1539 aa10.94□□□□□ -0.66
MSL3-210ENST00000468149 KIDINS220Q9ULH0 1771 aa10.94□□□□□ -0.66
MSL3-210ENST00000468149 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms