RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
MSL3-210ENST00000468149 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
MSL3-210ENST00000468149 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
MSL3-210ENST00000468149 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
MSL3-210ENST00000468149 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
MSL3-210ENST00000468149 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
MSL3-210ENST00000468149 ABCC9O60706 1549 aa14.67□□□□□ -0.06
MSL3-210ENST00000468149 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
MSL3-210ENST00000468149 PLPPR3Q6T4P5 718 aa14.37□□□□□ -0.11
MSL3-210ENST00000468149 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
MSL3-210ENST00000468149 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
MSL3-210ENST00000468149 NACADO15069 1562 aa14.21□□□□□ -0.13
MSL3-210ENST00000468149 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
MSL3-210ENST00000468149 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
MSL3-210ENST00000468149 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
MSL3-210ENST00000468149 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
MSL3-210ENST00000468149 UNC13AQ9UPW8 1703 aa13.99□□□□□ -0.17
MSL3-210ENST00000468149 FOXD1Q16676 465 aa13.9□□□□□ -0.18
MSL3-210ENST00000468149 BICRAQ9NZM4 1560 aa13.77□□□□□ -0.21
MSL3-210ENST00000468149 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
MSL3-210ENST00000468149 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
MSL3-210ENST00000468149 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
MSL3-210ENST00000468149 KCNA4P22459 653 aa13.57□□□□□ -0.24
MSL3-210ENST00000468149 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
MSL3-210ENST00000468149 ADRA2BP18089 450 aa13.53□□□□□ -0.24
MSL3-210ENST00000468149 PPP6R1Q9UPN7 881 aa13.53□□□□□ -0.24
MSL3-210ENST00000468149 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
MSL3-210ENST00000468149 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
MSL3-210ENST00000468149 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
MSL3-210ENST00000468149 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
MSL3-210ENST00000468149 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
MSL3-210ENST00000468149 SMARCA4P51532 1647 aa13.2□□□□□ -0.3
MSL3-210ENST00000468149 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
MSL3-210ENST00000468149 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
MSL3-210ENST00000468149 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
MSL3-210ENST00000468149 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
MSL3-210ENST00000468149 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
MSL3-210ENST00000468149 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
MSL3-210ENST00000468149 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
MSL3-210ENST00000468149 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
MSL3-210ENST00000468149 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
MSL3-210ENST00000468149 HMGXB3Q12766 1538 aa13.05□□□□□ -0.32
MSL3-210ENST00000468149 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
MSL3-210ENST00000468149 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
MSL3-210ENST00000468149 WIZO95785 1651 aa12.97□□□□□ -0.33
MSL3-210ENST00000468149 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
MSL3-210ENST00000468149 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
MSL3-210ENST00000468149 MSH5O43196 834 aa12.78□□□□□ -0.36
MSL3-210ENST00000468149 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
MSL3-210ENST00000468149 NESP48681 1621 aa12.71□□□□□ -0.37
MSL3-210ENST00000468149 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
MSL3-210ENST00000468149 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
MSL3-210ENST00000468149 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
MSL3-210ENST00000468149 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
MSL3-210ENST00000468149 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
MSL3-210ENST00000468149 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
MSL3-210ENST00000468149 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
MSL3-210ENST00000468149 CFTRP13569 1480 aa12.63□□□□□ -0.39
MSL3-210ENST00000468149 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
MSL3-210ENST00000468149 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
MSL3-210ENST00000468149 CUX2O14529 1486 aa12.55□□□□□ -0.4
MSL3-210ENST00000468149 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
MSL3-210ENST00000468149 ZBTB22O15209 634 aa12.53□□□□□ -0.4
MSL3-210ENST00000468149 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
MSL3-210ENST00000468149 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
MSL3-210ENST00000468149 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
MSL3-210ENST00000468149 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
MSL3-210ENST00000468149 WDR62O43379 1518 aa12.48□□□□□ -0.41
MSL3-210ENST00000468149 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.42
MSL3-210ENST00000468149 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
MSL3-210ENST00000468149 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
MSL3-210ENST00000468149 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
MSL3-210ENST00000468149 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
MSL3-210ENST00000468149 BCANQ96GW7 911 aa12.35□□□□□ -0.43
MSL3-210ENST00000468149 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
MSL3-210ENST00000468149 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
MSL3-210ENST00000468149 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
MSL3-210ENST00000468149 PLCB2Q00722 1185 aa12.27□□□□□ -0.44
MSL3-210ENST00000468149 ARXQ96QS3 562 aa12.26□□□□□ -0.45
MSL3-210ENST00000468149 CUX1P39880 1505 aa12.26□□□□□ -0.45
MSL3-210ENST00000468149 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
MSL3-210ENST00000468149 TARBP1Q13395 1621 aaKnown RBP12.25□□□□□ -0.45
MSL3-210ENST00000468149 POLA1P09884 1462 aaPredicted RBP12.24□□□□□ -0.45
MSL3-210ENST00000468149 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
MSL3-210ENST00000468149 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
MSL3-210ENST00000468149 TOP2BQ02880 1626 aa12.21□□□□□ -0.45
MSL3-210ENST00000468149 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
MSL3-210ENST00000468149 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
MSL3-210ENST00000468149 EIF4G3O43432 1585 aaKnown RBP12.2□□□□□ -0.46
MSL3-210ENST00000468149 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
MSL3-210ENST00000468149 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
MSL3-210ENST00000468149 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
MSL3-210ENST00000468149 ZNF608Q9ULD9 1512 aaPredicted RBP12.18□□□□□ -0.46
MSL3-210ENST00000468149 SOGA1O94964 1423 aa12.17□□□□□ -0.46
MSL3-210ENST00000468149 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
MSL3-210ENST00000468149 FKBP8Q14318 412 aa12.15□□□□□ -0.47
MSL3-210ENST00000468149 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
MSL3-210ENST00000468149 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
MSL3-210ENST00000468149 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
MSL3-210ENST00000468149 TPRNQ4KMQ1 711 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms