RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TSPOAP1O95153 1857 aa21.44■■□□□ 1.02
PHACTR4-203ENST00000463428 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
PHACTR4-203ENST00000463428 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
PHACTR4-203ENST00000463428 ARHGAP5Q13017 1502 aa21.39■■□□□ 1.02
PHACTR4-203ENST00000463428 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.01
PHACTR4-203ENST00000463428 EFCAB2Q5VUJ9 269 aa21.38■■□□□ 1.01
PHACTR4-203ENST00000463428 FANCAO15360 1455 aa21.38■■□□□ 1.01
PHACTR4-203ENST00000463428 NEO1Q92859 1461 aa21.35■■□□□ 1.01
PHACTR4-203ENST00000463428 SAMD9LQ8IVG5 1584 aa21.35■■□□□ 1.01
PHACTR4-203ENST00000463428 ZNF644Q9H582 1327 aaPredicted RBP21.35■■□□□ 1.01
PHACTR4-203ENST00000463428 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
PHACTR4-203ENST00000463428 TEX14Q8IWB6 1497 aa21.35■■□□□ 1.01
PHACTR4-203ENST00000463428 PTPN23Q9H3S7 1636 aa21.34■■□□□ 1.01
PHACTR4-203ENST00000463428 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
PHACTR4-203ENST00000463428 CFAP74Q9C0B2 1584 aa21.34■■□□□ 1.01
PHACTR4-203ENST00000463428 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
PHACTR4-203ENST00000463428 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
PHACTR4-203ENST00000463428 CAMSAP2Q08AD1 1489 aa21.32■■□□□ 1
PHACTR4-203ENST00000463428 ARHGEF12Q9NZN5 1544 aa21.3■■□□□ 1
PHACTR4-203ENST00000463428 ABCC1P33527 1531 aa21.29■■□□□ 1
PHACTR4-203ENST00000463428 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
PHACTR4-203ENST00000463428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
PHACTR4-203ENST00000463428 PLEKHH2Q8IVE3 1493 aa21.28■■□□□ 1
PHACTR4-203ENST00000463428 ADGRL1O94910 1474 aa21.27■■□□□ 1
PHACTR4-203ENST00000463428 MBD5Q9P267 1494 aa21.27■■□□□ 1
PHACTR4-203ENST00000463428 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
PHACTR4-203ENST00000463428 HNRNPMP52272 730 aaKnown RBP eCLIP21.25■□□□□ 0.992e-7■■■■□ 22
PHACTR4-203ENST00000463428 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
PHACTR4-203ENST00000463428 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
PHACTR4-203ENST00000463428 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
PHACTR4-203ENST00000463428 TRAPPC8Q9Y2L5 1435 aa21.22■□□□□ 0.99
PHACTR4-203ENST00000463428 ARHGEF5Q12774 1597 aa21.22■□□□□ 0.99
PHACTR4-203ENST00000463428 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
PHACTR4-203ENST00000463428 RSPH4AQ5TD94 716 aa21.2■□□□□ 0.98
PHACTR4-203ENST00000463428 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
PHACTR4-203ENST00000463428 DNMT1P26358 1616 aaKnown RBP21.19■□□□□ 0.98
PHACTR4-203ENST00000463428 ABCC5O15440 1437 aa21.19■□□□□ 0.98
PHACTR4-203ENST00000463428 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
PHACTR4-203ENST00000463428 FRMPD1Q5SYB0 1578 aa21.17■□□□□ 0.98
PHACTR4-203ENST00000463428 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
PHACTR4-203ENST00000463428 AFAP1Q8N556 730 aa21.17■□□□□ 0.98
PHACTR4-203ENST00000463428 CCDC141Q6ZP82 1450 aa21.17■□□□□ 0.98
PHACTR4-203ENST00000463428 DAPK1P53355 1430 aa21.17■□□□□ 0.98
PHACTR4-203ENST00000463428 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
PHACTR4-203ENST00000463428 PTPRKQ15262 1439 aa21.15■□□□□ 0.98
PHACTR4-203ENST00000463428 KDM5CP41229 1560 aa21.14■□□□□ 0.98
PHACTR4-203ENST00000463428 CROCC2H7BZ55 1655 aa21.13■□□□□ 0.97
PHACTR4-203ENST00000463428 KDM6BO15054 1643 aa21.13■□□□□ 0.97
PHACTR4-203ENST00000463428 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
PHACTR4-203ENST00000463428 MAST1Q9Y2H9 1570 aa21.11■□□□□ 0.97
PHACTR4-203ENST00000463428 SHANK2Q9UPX8 1470 aa21.1■□□□□ 0.97
PHACTR4-203ENST00000463428 ZMYM4Q5VZL5 1548 aa21.1■□□□□ 0.97
PHACTR4-203ENST00000463428 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
PHACTR4-203ENST00000463428 TSPY4P0CV99 314 aa21.09■□□□□ 0.97
PHACTR4-203ENST00000463428 TSPY10P0CW01 314 aa21.09■□□□□ 0.97
PHACTR4-203ENST00000463428 ITGAEP38570 1179 aa21.09■□□□□ 0.97
PHACTR4-203ENST00000463428 RTEL1-TNFRSF6BF6WH68 1400 aa21.08■□□□□ 0.96
PHACTR4-203ENST00000463428 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.96
PHACTR4-203ENST00000463428 SPAG9O60271 1321 aaKnown RBP21.08■□□□□ 0.96
PHACTR4-203ENST00000463428 KIDINS220Q9ULH0 1771 aa21.07■□□□□ 0.96
PHACTR4-203ENST00000463428 INO80Q9ULG1 1556 aaPredicted RBP21.07■□□□□ 0.96
PHACTR4-203ENST00000463428 ZFYVE16Q7Z3T8 1539 aa21.06■□□□□ 0.96
PHACTR4-203ENST00000463428 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
PHACTR4-203ENST00000463428 CHIC2Q9UKJ5 165 aa21.05■□□□□ 0.96
PHACTR4-203ENST00000463428 ADGRL2O95490 1459 aa21.05■□□□□ 0.96
PHACTR4-203ENST00000463428 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
PHACTR4-203ENST00000463428 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
PHACTR4-203ENST00000463428 ADGBQ8N7X0 1667 aa21.02■□□□□ 0.96
PHACTR4-203ENST00000463428 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
PHACTR4-203ENST00000463428 ROCK1Q13464 1354 aa21.02■□□□□ 0.95
PHACTR4-203ENST00000463428 YEATS2Q9ULM3 1422 aa21.01■□□□□ 0.95
PHACTR4-203ENST00000463428 PLXNC1O60486 1568 aa21■□□□□ 0.95
PHACTR4-203ENST00000463428 ABCA6Q8N139 1617 aa20.99■□□□□ 0.95
PHACTR4-203ENST00000463428 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
PHACTR4-203ENST00000463428 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
PHACTR4-203ENST00000463428 MYT1LQ9UL68 1186 aa20.97■□□□□ 0.95
PHACTR4-203ENST00000463428 RRP7BPQ9NSQ0 103 aa20.96■□□□□ 0.95
PHACTR4-203ENST00000463428 ARHGEF40Q8TER5 1519 aa20.95■□□□□ 0.94
PHACTR4-203ENST00000463428 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
PHACTR4-203ENST00000463428 NAIPQ13075 1403 aa20.93■□□□□ 0.94
PHACTR4-203ENST00000463428 ATP10AO60312 1499 aa20.93■□□□□ 0.94
PHACTR4-203ENST00000463428 HFM1A2PYH4 1435 aa20.93■□□□□ 0.94
PHACTR4-203ENST00000463428 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
PHACTR4-203ENST00000463428 DUOX2Q9NRD8 1548 aa20.92■□□□□ 0.94
PHACTR4-203ENST00000463428 A2MP01023 1474 aa20.91■□□□□ 0.94
PHACTR4-203ENST00000463428 REREQ9P2R6 1566 aa20.9■□□□□ 0.94
PHACTR4-203ENST00000463428 GCC2Q8IWJ2 1684 aa20.9■□□□□ 0.94
PHACTR4-203ENST00000463428 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
PHACTR4-203ENST00000463428 SIGLEC1Q9BZZ2 1709 aa20.88■□□□□ 0.93
PHACTR4-203ENST00000463428 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
PHACTR4-203ENST00000463428 ERBINQ96RT1 1412 aa20.85■□□□□ 0.93
PHACTR4-203ENST00000463428 SETD5Q9C0A6 1442 aa20.85■□□□□ 0.93
PHACTR4-203ENST00000463428 AGLP35573 1532 aa20.83■□□□□ 0.93
PHACTR4-203ENST00000463428 BCORL1Q5H9F3 1711 aa20.83■□□□□ 0.93
PHACTR4-203ENST00000463428 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
PHACTR4-203ENST00000463428 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
PHACTR4-203ENST00000463428 KIF3BO15066 747 aa20.78■□□□□ 0.92
PHACTR4-203ENST00000463428 HRCP23327 699 aa20.78■□□□□ 0.92
PHACTR4-203ENST00000463428 DEPDC5O75140 1603 aa20.76■□□□□ 0.91
PHACTR4-203ENST00000463428 RNF17Q9BXT8 1623 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms