RNA–Protein interactions for RNA: ENST00000462394.1

LDLRAP1-202, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 369 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-202ENST00000462394 ZMYM4Q5VZL5 1548 aa7.43□□□□□ -1.22
LDLRAP1-202ENST00000462394 ARHGEF12Q9NZN5 1544 aa7.43□□□□□ -1.22
LDLRAP1-202ENST00000462394 UHRF1BP1Q6BDS2 1440 aa7.43□□□□□ -1.22
LDLRAP1-202ENST00000462394 EFCAB5A4FU69 1503 aa7.41□□□□□ -1.22
LDLRAP1-202ENST00000462394 RICTORQ6R327 1708 aa7.41□□□□□ -1.22
LDLRAP1-202ENST00000462394 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
LDLRAP1-202ENST00000462394 CEBPAP49715 358 aaPredicted RBP7.4□□□□□ -1.22
LDLRAP1-202ENST00000462394 ZFYVE16Q7Z3T8 1539 aa7.4□□□□□ -1.22
LDLRAP1-202ENST00000462394 SIGLEC1Q9BZZ2 1709 aa7.4□□□□□ -1.23
LDLRAP1-202ENST00000462394 MED1Q15648 1581 aaPredicted RBP7.39□□□□□ -1.23
LDLRAP1-202ENST00000462394 MLECQ14165 292 aa7.39□□□□□ -1.23
LDLRAP1-202ENST00000462394 RNF216Q9NWF9 866 aaPredicted RBP7.39□□□□□ -1.23
LDLRAP1-202ENST00000462394 NCOA1Q15788 1441 aa7.38□□□□□ -1.23
LDLRAP1-202ENST00000462394 FAM9AQ8IZU1 332 aaPredicted RBP7.38□□□□□ -1.23
LDLRAP1-202ENST00000462394 FER1L4A9Z1Z3 1794 aa7.38□□□□□ -1.23
LDLRAP1-202ENST00000462394 ATP10AO60312 1499 aa7.37□□□□□ -1.23
LDLRAP1-202ENST00000462394 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
LDLRAP1-202ENST00000462394 C9orf84Q5VXU9 1444 aa7.35□□□□□ -1.23
LDLRAP1-202ENST00000462394 TRAPPC8Q9Y2L5 1435 aa7.35□□□□□ -1.23
LDLRAP1-202ENST00000462394 CFAP74Q9C0B2 1584 aa7.35□□□□□ -1.23
LDLRAP1-202ENST00000462394 NPM3O75607 178 aaKnown RBP7.35□□□□□ -1.23
LDLRAP1-202ENST00000462394 HSPA1LP34931 641 aa7.35□□□□□ -1.23
LDLRAP1-202ENST00000462394 SETD1BQ9UPS6 1966 aaKnown RBP7.35□□□□□ -1.23
LDLRAP1-202ENST00000462394 HECW1Q76N89 1606 aa7.34□□□□□ -1.23
LDLRAP1-202ENST00000462394 ZNF335Q9H4Z2 1342 aaPredicted RBP7.34□□□□□ -1.23
LDLRAP1-202ENST00000462394 ARID3CA6NKF2 412 aa7.34□□□□□ -1.23
LDLRAP1-202ENST00000462394 NCBP3Q53F19 620 aaKnown RBP7.33□□□□□ -1.24
LDLRAP1-202ENST00000462394 PLEKHD1A6NEE1 506 aa7.32□□□□□ -1.24
LDLRAP1-202ENST00000462394 SCAPERQ9BY12 1400 aa7.32□□□□□ -1.24
LDLRAP1-202ENST00000462394 TOM1O60784 492 aa7.31□□□□□ -1.24
LDLRAP1-202ENST00000462394 KCNA4P22459 653 aa7.31□□□□□ -1.24
LDLRAP1-202ENST00000462394 PKD2Q13563 968 aa7.31□□□□□ -1.24
LDLRAP1-202ENST00000462394 CTTNBP2Q8WZ74 1663 aa7.31□□□□□ -1.24
LDLRAP1-202ENST00000462394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.31□□□□□ -1.24
LDLRAP1-202ENST00000462394 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
LDLRAP1-202ENST00000462394 NPATQ14207 1427 aa7.3□□□□□ -1.24
LDLRAP1-202ENST00000462394 PLA2R1Q13018 1463 aa7.3□□□□□ -1.24
LDLRAP1-202ENST00000462394 REREQ9P2R6 1566 aa7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 PLCH2O75038 1416 aa7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 AGLP35573 1532 aa7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 HNRNPUL2Q1KMD3 747 aaKnown RBP7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 CAMSAP1Q5T5Y3 1602 aa7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 TCOF1Q13428 1488 aaKnown RBP7.29□□□□□ -1.24
LDLRAP1-202ENST00000462394 NCKAP5LQ9HCH0 1330 aa7.28□□□□□ -1.24
LDLRAP1-202ENST00000462394 CNTLNQ9NXG0 1405 aa7.28□□□□□ -1.24
LDLRAP1-202ENST00000462394 RAPGEF6Q8TEU7 1601 aa7.28□□□□□ -1.24
LDLRAP1-202ENST00000462394 RGS17Q9UGC6 210 aaPredicted RBP7.28□□□□□ -1.24
LDLRAP1-202ENST00000462394 C3P01024 1663 aa7.28□□□□□ -1.24
LDLRAP1-202ENST00000462394 PIP4K2BP78356 416 aa7.27□□□□□ -1.25
LDLRAP1-202ENST00000462394 P3H3Q8IVL6 736 aa7.27□□□□□ -1.25
LDLRAP1-202ENST00000462394 PRXQ9BXM0 1461 aa7.27□□□□□ -1.25
LDLRAP1-202ENST00000462394 ZNF518AQ6AHZ1 1483 aa7.26□□□□□ -1.25
LDLRAP1-202ENST00000462394 EFCAB2Q5VUJ9 269 aa7.26□□□□□ -1.25
LDLRAP1-202ENST00000462394 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
LDLRAP1-202ENST00000462394 CPS1P31327 1500 aa7.26□□□□□ -1.25
LDLRAP1-202ENST00000462394 PTPRKQ15262 1439 aa7.26□□□□□ -1.25
LDLRAP1-202ENST00000462394 KDM5CP41229 1560 aa7.25□□□□□ -1.25
LDLRAP1-202ENST00000462394 SAMD9Q5K651 1589 aa7.25□□□□□ -1.25
LDLRAP1-202ENST00000462394 MLH3Q9UHC1 1453 aa7.24□□□□□ -1.25
LDLRAP1-202ENST00000462394 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
LDLRAP1-202ENST00000462394 AFAP1Q8N556 730 aa7.23□□□□□ -1.25
LDLRAP1-202ENST00000462394 DIP2CQ9Y2E4 1556 aa7.23□□□□□ -1.25
LDLRAP1-202ENST00000462394 SHANK2Q9UPX8 1470 aa7.23□□□□□ -1.25
LDLRAP1-202ENST00000462394 ALKQ9UM73 1620 aa7.23□□□□□ -1.25
LDLRAP1-202ENST00000462394 CACNB1Q02641 598 aaPredicted RBP7.22□□□□□ -1.25
LDLRAP1-202ENST00000462394 RNF39Q9H2S5 420 aa7.21□□□□□ -1.26
LDLRAP1-202ENST00000462394 MROH2AA6NES4 1674 aa7.21□□□□□ -1.26
LDLRAP1-202ENST00000462394 ZNF142P52746 1687 aaPredicted RBP7.21□□□□□ -1.26
LDLRAP1-202ENST00000462394 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
LDLRAP1-202ENST00000462394 CEP170BQ9Y4F5 1589 aaPredicted RBP7.19□□□□□ -1.26
LDLRAP1-202ENST00000462394 ABCA6Q8N139 1617 aa7.18□□□□□ -1.26
LDLRAP1-202ENST00000462394 MYO3AQ8NEV4 1616 aa7.17□□□□□ -1.26
LDLRAP1-202ENST00000462394 A2ML1A8K2U0 1454 aa7.17□□□□□ -1.26
LDLRAP1-202ENST00000462394 VWDEQ8N2E2 1590 aa7.16□□□□□ -1.26
LDLRAP1-202ENST00000462394 MYT1LQ9UL68 1186 aa7.16□□□□□ -1.26
LDLRAP1-202ENST00000462394 NEURL4Q96JN8 1562 aa7.16□□□□□ -1.26
LDLRAP1-202ENST00000462394 UPF1Q92900 1129 aaKnown RBP eCLIP7.15□□□□□ -1.26
LDLRAP1-202ENST00000462394 MED14O60244 1454 aa7.15□□□□□ -1.27
LDLRAP1-202ENST00000462394 DNMT1P26358 1616 aaKnown RBP7.14□□□□□ -1.27
LDLRAP1-202ENST00000462394 CDK13Q14004 1512 aaKnown RBP7.14□□□□□ -1.27
LDLRAP1-202ENST00000462394 MYO5CQ9NQX4 1742 aa7.14□□□□□ -1.27
LDLRAP1-202ENST00000462394 CDK11AQ9UQ88 783 aaPredicted RBP7.14□□□□□ -1.27
LDLRAP1-202ENST00000462394 ARHGAP5Q13017 1502 aa7.13□□□□□ -1.27
LDLRAP1-202ENST00000462394 LRRC7Q96NW7 1537 aa7.13□□□□□ -1.27
LDLRAP1-202ENST00000462394 ANKLE2Q86XL3 938 aa7.13□□□□□ -1.27
LDLRAP1-202ENST00000462394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.13□□□□□ -1.27
LDLRAP1-202ENST00000462394 KIDINS220Q9ULH0 1771 aa7.13□□□□□ -1.27
LDLRAP1-202ENST00000462394 FAM135BQ49AJ0 1406 aa7.12□□□□□ -1.27
LDLRAP1-202ENST00000462394 ABCC1P33527 1531 aa7.11□□□□□ -1.27
LDLRAP1-202ENST00000462394 TROQ12816 1431 aaPredicted RBP7.11□□□□□ -1.27
LDLRAP1-202ENST00000462394 THEMISQ8N1K5 641 aaPredicted RBP7.11□□□□□ -1.27
LDLRAP1-202ENST00000462394 RNF17Q9BXT8 1623 aaKnown RBP7.11□□□□□ -1.27
LDLRAP1-202ENST00000462394 SRCAPQ6ZRS2 3230 aa7.1□□□□□ -1.27
LDLRAP1-202ENST00000462394 NPHP4O75161 1426 aaPredicted RBP7.1□□□□□ -1.27
LDLRAP1-202ENST00000462394 DEPDC5O75140 1603 aa7.1□□□□□ -1.27
LDLRAP1-202ENST00000462394 POLR1AO95602 1720 aaPredicted RBP7.1□□□□□ -1.27
LDLRAP1-202ENST00000462394 SUPT6HQ7KZ85 1726 aaKnown RBP7.1□□□□□ -1.27
LDLRAP1-202ENST00000462394 KIF14Q15058 1648 aa7.09□□□□□ -1.27
LDLRAP1-202ENST00000462394 SYNMO15061 1565 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms