RNA–Protein interactions for RNA: ENST00000462394.1

LDLRAP1-202, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 369 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-202ENST00000462394 AEBP2Q6ZN18 517 aaPredicted RBP11.53□□□□□ -0.56
LDLRAP1-202ENST00000462394 NISCHQ9Y2I1 1504 aa10.99□□□□□ -0.65
LDLRAP1-202ENST00000462394 CHIC1Q5VXU3 224 aa10.92□□□□□ -0.66
LDLRAP1-202ENST00000462394 ABCC9O60706 1549 aa10.43□□□□□ -0.74
LDLRAP1-202ENST00000462394 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
LDLRAP1-202ENST00000462394 CCDC180Q9P1Z9 1646 aa10.03□□□□□ -0.8
LDLRAP1-202ENST00000462394 RB1CC1Q8TDY2 1594 aa9.76□□□□□ -0.85
LDLRAP1-202ENST00000462394 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
LDLRAP1-202ENST00000462394 PHF23Q9BUL5 403 aaPredicted RBP9.68□□□□□ -0.86
LDLRAP1-202ENST00000462394 SENP3Q9H4L4 574 aaPredicted RBP9.66□□□□□ -0.86
LDLRAP1-202ENST00000462394 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
LDLRAP1-202ENST00000462394 NACADO15069 1562 aa9.62□□□□□ -0.87
LDLRAP1-202ENST00000462394 BICRAQ9NZM4 1560 aa9.51□□□□□ -0.89
LDLRAP1-202ENST00000462394 CECR2Q9BXF3 1484 aa9.47□□□□□ -0.89
LDLRAP1-202ENST00000462394 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
LDLRAP1-202ENST00000462394 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
LDLRAP1-202ENST00000462394 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
LDLRAP1-202ENST00000462394 CC2D2AQ9P2K1 1620 aa9.4□□□□□ -0.9
LDLRAP1-202ENST00000462394 DCAF8L2P0C7V8 631 aa9.37□□□□□ -0.91
LDLRAP1-202ENST00000462394 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
LDLRAP1-202ENST00000462394 CUX2O14529 1486 aa9.23□□□□□ -0.93
LDLRAP1-202ENST00000462394 FOXD1Q16676 465 aa9.12□□□□□ -0.95
LDLRAP1-202ENST00000462394 DCAF1Q9Y4B6 1507 aa9.11□□□□□ -0.95
LDLRAP1-202ENST00000462394 SCRIBQ14160 1630 aa9.07□□□□□ -0.96
LDLRAP1-202ENST00000462394 ERCC6Q03468 1493 aa9.02□□□□□ -0.96
LDLRAP1-202ENST00000462394 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
LDLRAP1-202ENST00000462394 ZCCHC6Q5VYS8 1495 aaKnown RBP9.02□□□□□ -0.97
LDLRAP1-202ENST00000462394 NCAPD3P42695 1498 aa8.93□□□□□ -0.98
LDLRAP1-202ENST00000462394 NESP48681 1621 aa8.83□□□□□ -1
LDLRAP1-202ENST00000462394 THOC2Q8NI27 1593 aaKnown RBP8.83□□□□□ -1
LDLRAP1-202ENST00000462394 ATAD2BQ9ULI0 1458 aa8.79□□□□□ -1
LDLRAP1-202ENST00000462394 HMGXB3Q12766 1538 aa8.78□□□□□ -1
LDLRAP1-202ENST00000462394 LAMC3Q9Y6N6 1575 aa8.74□□□□□ -1.01
LDLRAP1-202ENST00000462394 OSCARQ8IYS5 282 aa8.74□□□□□ -1.01
LDLRAP1-202ENST00000462394 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
LDLRAP1-202ENST00000462394 PDS5BQ9NTI5 1447 aa8.72□□□□□ -1.01
LDLRAP1-202ENST00000462394 PLPPR3Q6T4P5 718 aa8.71□□□□□ -1.02
LDLRAP1-202ENST00000462394 BAZ1AQ9NRL2 1556 aaPredicted RBP8.67□□□□□ -1.02
LDLRAP1-202ENST00000462394 WDR62O43379 1518 aa8.65□□□□□ -1.02
LDLRAP1-202ENST00000462394 MRC2Q9UBG0 1479 aa8.65□□□□□ -1.02
LDLRAP1-202ENST00000462394 BAZ1BQ9UIG0 1483 aaKnown RBP8.65□□□□□ -1.02
LDLRAP1-202ENST00000462394 PPP6R1Q9UPN7 881 aa8.65□□□□□ -1.02
LDLRAP1-202ENST00000462394 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.03
LDLRAP1-202ENST00000462394 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
LDLRAP1-202ENST00000462394 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
LDLRAP1-202ENST00000462394 ADRA2BP18089 450 aa8.62□□□□□ -1.03
LDLRAP1-202ENST00000462394 CADPSQ9ULU8 1353 aa8.61□□□□□ -1.03
LDLRAP1-202ENST00000462394 RIMBP3CA6NJZ7 1639 aa8.6□□□□□ -1.03
LDLRAP1-202ENST00000462394 RIMBP3BA6NNM3 1639 aa8.6□□□□□ -1.03
LDLRAP1-202ENST00000462394 RIMBP3Q9UFD9 1639 aa8.6□□□□□ -1.03
LDLRAP1-202ENST00000462394 ARHGEF11O15085 1522 aa8.56□□□□□ -1.04
LDLRAP1-202ENST00000462394 TRHP20396 242 aaPredicted RBP8.54□□□□□ -1.04
LDLRAP1-202ENST00000462394 CEP164Q9UPV0 1460 aa8.52□□□□□ -1.05
LDLRAP1-202ENST00000462394 CYB5RLQ6IPT4 315 aa8.52□□□□□ -1.05
LDLRAP1-202ENST00000462394 PIAS4Q8N2W9 510 aaPredicted RBP8.51□□□□□ -1.05
LDLRAP1-202ENST00000462394 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
LDLRAP1-202ENST00000462394 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
LDLRAP1-202ENST00000462394 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
LDLRAP1-202ENST00000462394 URB2Q14146 1524 aaKnown RBP8.44□□□□□ -1.06
LDLRAP1-202ENST00000462394 CFTRP13569 1480 aa8.43□□□□□ -1.06
LDLRAP1-202ENST00000462394 RSF1Q96T23 1441 aaPredicted RBP8.42□□□□□ -1.06
LDLRAP1-202ENST00000462394 IFT140Q96RY7 1462 aa8.39□□□□□ -1.07
LDLRAP1-202ENST00000462394 ZNF608Q9ULD9 1512 aaPredicted RBP8.39□□□□□ -1.07
LDLRAP1-202ENST00000462394 MSH5O43196 834 aa8.37□□□□□ -1.07
LDLRAP1-202ENST00000462394 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
LDLRAP1-202ENST00000462394 EIF4G3O43432 1585 aaKnown RBP8.29□□□□□ -1.08
LDLRAP1-202ENST00000462394 CHD1O14646 1710 aa8.26□□□□□ -1.09
LDLRAP1-202ENST00000462394 TOPBP1Q92547 1522 aa8.26□□□□□ -1.09
LDLRAP1-202ENST00000462394 WIZO95785 1651 aa8.26□□□□□ -1.09
LDLRAP1-202ENST00000462394 ABCC8Q09428 1581 aa8.26□□□□□ -1.09
LDLRAP1-202ENST00000462394 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
LDLRAP1-202ENST00000462394 CLASP1Q7Z460 1538 aa8.25□□□□□ -1.09
LDLRAP1-202ENST00000462394 FBLN2P98095 1184 aa8.25□□□□□ -1.09
LDLRAP1-202ENST00000462394 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
LDLRAP1-202ENST00000462394 GAPVD1Q14C86 1478 aa8.19□□□□□ -1.1
LDLRAP1-202ENST00000462394 TOP2AP11388 1531 aaKnown RBP8.19□□□□□ -1.1
LDLRAP1-202ENST00000462394 SYNJ1O43426 1573 aa8.18□□□□□ -1.1
LDLRAP1-202ENST00000462394 DNMBPQ6XZF7 1577 aa8.18□□□□□ -1.1
LDLRAP1-202ENST00000462394 KDM4FA0A1W2PPD8 638 aa8.18□□□□□ -1.1
LDLRAP1-202ENST00000462394 POTEDQ86YR6 584 aa8.18□□□□□ -1.1
LDLRAP1-202ENST00000462394 CHMP7Q8WUX9 453 aaPredicted RBP8.17□□□□□ -1.1
LDLRAP1-202ENST00000462394 PRDM2Q13029 1718 aa8.16□□□□□ -1.1
LDLRAP1-202ENST00000462394 POLA1P09884 1462 aaPredicted RBP8.15□□□□□ -1.1
LDLRAP1-202ENST00000462394 SNAPC4Q5SXM2 1469 aa8.15□□□□□ -1.1
LDLRAP1-202ENST00000462394 MAGI1Q96QZ7 1491 aaPredicted RBP8.15□□□□□ -1.1
LDLRAP1-202ENST00000462394 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
LDLRAP1-202ENST00000462394 TDRD9Q8NDG6 1382 aaKnown RBP8.14□□□□□ -1.11
LDLRAP1-202ENST00000462394 SYNJ2O15056 1496 aa8.13□□□□□ -1.11
LDLRAP1-202ENST00000462394 SOGA1O94964 1423 aa8.12□□□□□ -1.11
LDLRAP1-202ENST00000462394 CCDC88BA6NC98 1476 aa8.11□□□□□ -1.11
LDLRAP1-202ENST00000462394 GRIN2BQ13224 1484 aa8.11□□□□□ -1.11
LDLRAP1-202ENST00000462394 RAD54L2Q9Y4B4 1467 aa8.11□□□□□ -1.11
LDLRAP1-202ENST00000462394 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
LDLRAP1-202ENST00000462394 KIF13AQ9H1H9 1805 aa8.06□□□□□ -1.12
LDLRAP1-202ENST00000462394 ERCC6L2Q5T890 1561 aa8.05□□□□□ -1.12
LDLRAP1-202ENST00000462394 FBXO41Q8TF61 875 aa8.04□□□□□ -1.12
LDLRAP1-202ENST00000462394 FAM69CQ0P6D2 419 aa8.03□□□□□ -1.12
LDLRAP1-202ENST00000462394 FGD5Q6ZNL6 1462 aa8.02□□□□□ -1.13
LDLRAP1-202ENST00000462394 CEP170Q5SW79 1584 aa8.01□□□□□ -1.13
LDLRAP1-202ENST00000462394 NUP160Q12769 1436 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms