RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 BIVM-ERCC5R4GMW8 1640 aa10.46□□□□□ -0.74
SMARCC1-204ENST00000462198 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
SMARCC1-204ENST00000462198 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
SMARCC1-204ENST00000462198 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
SMARCC1-204ENST00000462198 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
SMARCC1-204ENST00000462198 HSPA2P54652 639 aa10.44□□□□□ -0.74
SMARCC1-204ENST00000462198 PCF11O94913 1555 aaKnown RBP10.43□□□□□ -0.74
SMARCC1-204ENST00000462198 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
SMARCC1-204ENST00000462198 KCNH8Q96L42 1107 aa10.42□□□□□ -0.74
SMARCC1-204ENST00000462198 KDM5BQ9UGL1 1544 aa10.42□□□□□ -0.74
SMARCC1-204ENST00000462198 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
SMARCC1-204ENST00000462198 IGF1RP08069 1367 aa10.4□□□□□ -0.74
SMARCC1-204ENST00000462198 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
SMARCC1-204ENST00000462198 ZCCHC11Q5TAX3 1644 aaKnown RBP10.39□□□□□ -0.75
SMARCC1-204ENST00000462198 MAGI3Q5TCQ9 1506 aa10.38□□□□□ -0.75
SMARCC1-204ENST00000462198 ARID4BQ4LE39 1312 aaPredicted RBP10.38□□□□□ -0.75
SMARCC1-204ENST00000462198 SPATA31D1Q6ZQQ2 1576 aa10.38□□□□□ -0.75
SMARCC1-204ENST00000462198 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
SMARCC1-204ENST00000462198 WDR7Q9Y4E6 1490 aa10.36□□□□□ -0.75
SMARCC1-204ENST00000462198 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
SMARCC1-204ENST00000462198 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
SMARCC1-204ENST00000462198 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
SMARCC1-204ENST00000462198 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
SMARCC1-204ENST00000462198 RAPGEF3O95398 923 aa10.33□□□□□ -0.76
SMARCC1-204ENST00000462198 SSUH2Q9Y2M2 353 aa10.32□□□□□ -0.76
SMARCC1-204ENST00000462198 DISP1Q96F81 1524 aa10.32□□□□□ -0.76
SMARCC1-204ENST00000462198 CARMIL1Q5VZK9 1371 aa10.31□□□□□ -0.76
SMARCC1-204ENST00000462198 POTEIP0CG38 1075 aa10.31□□□□□ -0.76
SMARCC1-204ENST00000462198 IQGAP2Q13576 1575 aa10.3□□□□□ -0.76
SMARCC1-204ENST00000462198 RIMS1Q86UR5 1692 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-204ENST00000462198 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
SMARCC1-204ENST00000462198 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
SMARCC1-204ENST00000462198 FKBP8Q14318 412 aa10.27□□□□□ -0.77
SMARCC1-204ENST00000462198 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
SMARCC1-204ENST00000462198 PHLDB1Q86UU1 1377 aa10.26□□□□□ -0.77
SMARCC1-204ENST00000462198 CLCN6P51797 869 aa10.23□□□□□ -0.77
SMARCC1-204ENST00000462198 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
SMARCC1-204ENST00000462198 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
SMARCC1-204ENST00000462198 MKRN4PQ13434 485 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-204ENST00000462198 MLECQ14165 292 aa10.22□□□□□ -0.77
SMARCC1-204ENST00000462198 UGGT2Q9NYU1 1516 aa10.22□□□□□ -0.77
SMARCC1-204ENST00000462198 STRCQ7RTU9 1775 aa10.21□□□□□ -0.78
SMARCC1-204ENST00000462198 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
SMARCC1-204ENST00000462198 KIAA0556O60303 1618 aa10.2□□□□□ -0.78
SMARCC1-204ENST00000462198 POGZQ7Z3K3 1410 aa10.19□□□□□ -0.78
SMARCC1-204ENST00000462198 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
SMARCC1-204ENST00000462198 CEBPAP49715 358 aaPredicted RBP10.18□□□□□ -0.78
SMARCC1-204ENST00000462198 NEO1Q92859 1461 aa10.17□□□□□ -0.78
SMARCC1-204ENST00000462198 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
SMARCC1-204ENST00000462198 ABCA8O94911 1581 aa10.17□□□□□ -0.78
SMARCC1-204ENST00000462198 FRMPD1Q5SYB0 1578 aa10.16□□□□□ -0.78
SMARCC1-204ENST00000462198 SETD1BQ9UPS6 1966 aaKnown RBP10.15□□□□□ -0.78
SMARCC1-204ENST00000462198 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.78
SMARCC1-204ENST00000462198 UBAP1LF5GYI3 381 aa10.15□□□□□ -0.78
SMARCC1-204ENST00000462198 FAM9AQ8IZU1 332 aaPredicted RBP10.14□□□□□ -0.79
SMARCC1-204ENST00000462198 FANCAO15360 1455 aa10.14□□□□□ -0.79
SMARCC1-204ENST00000462198 PREX1Q8TCU6 1659 aa10.14□□□□□ -0.79
SMARCC1-204ENST00000462198 PTPRTO14522 1441 aa10.14□□□□□ -0.79
SMARCC1-204ENST00000462198 LTBP4Q8N2S1 1624 aa10.14□□□□□ -0.79
SMARCC1-204ENST00000462198 ATP10BO94823 1461 aa10.13□□□□□ -0.79
SMARCC1-204ENST00000462198 AKNAQ7Z591 1439 aa10.13□□□□□ -0.79
SMARCC1-204ENST00000462198 FER1L4A9Z1Z3 1794 aa10.13□□□□□ -0.79
SMARCC1-204ENST00000462198 DENND4BO75064 1496 aaPredicted RBP10.12□□□□□ -0.79
SMARCC1-204ENST00000462198 IQSEC2Q5JU85 1478 aa10.12□□□□□ -0.79
SMARCC1-204ENST00000462198 ARHGEF40Q8TER5 1519 aa10.12□□□□□ -0.79
SMARCC1-204ENST00000462198 RAPGEF2Q9Y4G8 1499 aa10.11□□□□□ -0.79
SMARCC1-204ENST00000462198 SIGLEC1Q9BZZ2 1709 aa10.11□□□□□ -0.79
SMARCC1-204ENST00000462198 TTC37Q6PGP7 1564 aa10.11□□□□□ -0.79
SMARCC1-204ENST00000462198 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-204ENST00000462198 GOLGA3Q08378 1498 aa10.1□□□□□ -0.79
SMARCC1-204ENST00000462198 DCBLD2Q96PD2 775 aa10.1□□□□□ -0.79
SMARCC1-204ENST00000462198 RICTORQ6R327 1708 aa10.1□□□□□ -0.79
SMARCC1-204ENST00000462198 FHOD3Q2V2M9 1422 aa10.09□□□□□ -0.79
SMARCC1-204ENST00000462198 UHRF1BP1Q6BDS2 1440 aa10.09□□□□□ -0.79
SMARCC1-204ENST00000462198 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
SMARCC1-204ENST00000462198 HSPA1LP34931 641 aa10.07□□□□□ -0.8
SMARCC1-204ENST00000462198 ZFYVE16Q7Z3T8 1539 aa10.06□□□□□ -0.8
SMARCC1-204ENST00000462198 ZNF579Q8NAF0 562 aaKnown RBP10.05□□□□□ -0.8
SMARCC1-204ENST00000462198 ARHGEF12Q9NZN5 1544 aa10.05□□□□□ -0.8
SMARCC1-204ENST00000462198 MED1Q15648 1581 aaPredicted RBP10.05□□□□□ -0.8
SMARCC1-204ENST00000462198 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
SMARCC1-204ENST00000462198 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
SMARCC1-204ENST00000462198 OTUD5Q96G74 571 aa10.04□□□□□ -0.8
SMARCC1-204ENST00000462198 ZNF335Q9H4Z2 1342 aaPredicted RBP10.04□□□□□ -0.8
SMARCC1-204ENST00000462198 PLEKHD1A6NEE1 506 aa10.03□□□□□ -0.8
SMARCC1-204ENST00000462198 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
SMARCC1-204ENST00000462198 ATP10AO60312 1499 aa10.03□□□□□ -0.8
SMARCC1-204ENST00000462198 CTTNBP2Q8WZ74 1663 aa10.02□□□□□ -0.8
SMARCC1-204ENST00000462198 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.8
SMARCC1-204ENST00000462198 HECW1Q76N89 1606 aa10.01□□□□□ -0.81
SMARCC1-204ENST00000462198 POTEMA6NI47 508 aa10.01□□□□□ -0.81
SMARCC1-204ENST00000462198 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
SMARCC1-204ENST00000462198 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
SMARCC1-204ENST00000462198 ESF1Q9H501 851 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-204ENST00000462198 SCAPERQ9BY12 1400 aa9.99□□□□□ -0.81
SMARCC1-204ENST00000462198 CFAP74Q9C0B2 1584 aa9.98□□□□□ -0.81
SMARCC1-204ENST00000462198 TOM1O60784 492 aa9.98□□□□□ -0.81
SMARCC1-204ENST00000462198 C9orf84Q5VXU9 1444 aa9.98□□□□□ -0.81
SMARCC1-204ENST00000462198 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
SMARCC1-204ENST00000462198 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms