RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
CHRD-208ENST00000460627 KIF21BO75037 1637 aa23.25■■□□□ 1.31
CHRD-208ENST00000460627 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
CHRD-208ENST00000460627 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
CHRD-208ENST00000460627 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
CHRD-208ENST00000460627 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
CHRD-208ENST00000460627 L3MBTL2Q969R5 705 aa23.23■■□□□ 1.31
CHRD-208ENST00000460627 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
CHRD-208ENST00000460627 MYOM3Q5VTT5 1437 aa23.21■■□□□ 1.31
CHRD-208ENST00000460627 CUX1P39880 1505 aa23.21■■□□□ 1.31
CHRD-208ENST00000460627 LMOD2Q6P5Q4 547 aa23.2■■□□□ 1.3
CHRD-208ENST00000460627 CASKIN1Q8WXD9 1431 aa23.19■■□□□ 1.3
CHRD-208ENST00000460627 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
CHRD-208ENST00000460627 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
CHRD-208ENST00000460627 CCER2I3L3R5 266 aa23.17■■□□□ 1.3
CHRD-208ENST00000460627 STK26Q9P289 416 aa23.17■■□□□ 1.3
CHRD-208ENST00000460627 TNNT2P45379 298 aaPredicted RBP23.17■■□□□ 1.3
CHRD-208ENST00000460627 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.3
CHRD-208ENST00000460627 A0A0G2JS52 829 aa23.16■■□□□ 1.3
CHRD-208ENST00000460627 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
CHRD-208ENST00000460627 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
CHRD-208ENST00000460627 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
CHRD-208ENST00000460627 FGD6Q6ZV73 1430 aa23.14■■□□□ 1.29
CHRD-208ENST00000460627 NEUROD2Q15784 382 aa23.14■■□□□ 1.29
CHRD-208ENST00000460627 MORC1Q86VD1 984 aa23.13■■□□□ 1.29
CHRD-208ENST00000460627 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
CHRD-208ENST00000460627 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
CHRD-208ENST00000460627 HSP90AA1P07900 732 aaKnown RBP23.12■■□□□ 1.29
CHRD-208ENST00000460627 U2SURPO15042 1029 aaKnown RBP23.12■■□□□ 1.29
CHRD-208ENST00000460627 CCDC144AA2RUR9 1427 aa23.11■■□□□ 1.29
CHRD-208ENST00000460627 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
CHRD-208ENST00000460627 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
CHRD-208ENST00000460627 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
CHRD-208ENST00000460627 EID1Q9Y6B2 187 aa23.08■■□□□ 1.29
CHRD-208ENST00000460627 EFCAB5A4FU69 1503 aa23.07■■□□□ 1.28
CHRD-208ENST00000460627 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
CHRD-208ENST00000460627 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
CHRD-208ENST00000460627 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
CHRD-208ENST00000460627 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
CHRD-208ENST00000460627 PEG3Q9GZU2 1588 aa23.05■■□□□ 1.28
CHRD-208ENST00000460627 UACAQ9BZF9 1416 aa23.05■■□□□ 1.28
CHRD-208ENST00000460627 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
CHRD-208ENST00000460627 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
CHRD-208ENST00000460627 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
CHRD-208ENST00000460627 RALBP1Q15311 655 aa23.03■■□□□ 1.28
CHRD-208ENST00000460627 FTSJ3Q8IY81 847 aaKnown RBP23.02■■□□□ 1.28
CHRD-208ENST00000460627 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
CHRD-208ENST00000460627 LAS1LQ9Y4W2 734 aaKnown RBP23.01■■□□□ 1.27
CHRD-208ENST00000460627 NCOA2Q15596 1464 aa23.01■■□□□ 1.27
CHRD-208ENST00000460627 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
CHRD-208ENST00000460627 FAM69CQ0P6D2 419 aa23■■□□□ 1.27
CHRD-208ENST00000460627 ZNF644Q9H582 1327 aaPredicted RBP23■■□□□ 1.27
CHRD-208ENST00000460627 PRDM2Q13029 1718 aa23■■□□□ 1.27
CHRD-208ENST00000460627 KIF15Q9NS87 1388 aa22.99■■□□□ 1.27
CHRD-208ENST00000460627 MS4A1P11836 297 aa22.98■■□□□ 1.27
CHRD-208ENST00000460627 VGFO15240 615 aaPredicted RBP22.98■■□□□ 1.27
CHRD-208ENST00000460627 TERF2IPQ9NYB0 399 aa22.97■■□□□ 1.27
CHRD-208ENST00000460627 CHMP4BQ9H444 224 aaKnown RBP22.97■■□□□ 1.27
CHRD-208ENST00000460627 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
CHRD-208ENST00000460627 SOX12O15370 315 aa22.94■■□□□ 1.26
CHRD-208ENST00000460627 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
CHRD-208ENST00000460627 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
CHRD-208ENST00000460627 STAC3Q96MF2 364 aa22.9■■□□□ 1.26
CHRD-208ENST00000460627 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
CHRD-208ENST00000460627 FRAT1Q92837 279 aaPredicted RBP22.88■■□□□ 1.25
CHRD-208ENST00000460627 TRAK1Q9UPV9 953 aa22.88■■□□□ 1.25
CHRD-208ENST00000460627 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
CHRD-208ENST00000460627 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
CHRD-208ENST00000460627 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
CHRD-208ENST00000460627 NLRP13Q86W25 1043 aa22.85■■□□□ 1.25
CHRD-208ENST00000460627 U2AF1L5P0DN76 240 aaPredicted RBP22.85■■□□□ 1.25
CHRD-208ENST00000460627 U2AF1Q01081 240 aaKnown RBP eCLIP22.85■■□□□ 1.25
CHRD-208ENST00000460627 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
CHRD-208ENST00000460627 ARXQ96QS3 562 aa22.84■■□□□ 1.25
CHRD-208ENST00000460627 ARHGAP5Q13017 1502 aa22.84■■□□□ 1.25
CHRD-208ENST00000460627 MIA2Q96PC5 1412 aa22.84■■□□□ 1.25
CHRD-208ENST00000460627 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
CHRD-208ENST00000460627 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
CHRD-208ENST00000460627 EIF5BO60841 1220 aaKnown RBP22.82■■□□□ 1.24
CHRD-208ENST00000460627 RTF1Q92541 710 aaKnown RBP22.82■■□□□ 1.24
CHRD-208ENST00000460627 AFAP1Q8N556 730 aa22.81■■□□□ 1.24
CHRD-208ENST00000460627 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
CHRD-208ENST00000460627 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
CHRD-208ENST00000460627 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
CHRD-208ENST00000460627 NGDNQ8NEJ9 315 aaKnown RBP22.79■■□□□ 1.24
CHRD-208ENST00000460627 USP47Q96K76 1375 aa22.78■■□□□ 1.24
CHRD-208ENST00000460627 HECW1Q76N89 1606 aa22.77■■□□□ 1.24
CHRD-208ENST00000460627 EVC2Q86UK5 1308 aa22.75■■□□□ 1.23
CHRD-208ENST00000460627 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
CHRD-208ENST00000460627 CUL7Q14999 1698 aa22.74■■□□□ 1.23
CHRD-208ENST00000460627 ANP32BQ92688 251 aaKnown RBP22.74■■□□□ 1.23
CHRD-208ENST00000460627 BECN1Q14457 450 aa22.73■■□□□ 1.23
CHRD-208ENST00000460627 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
CHRD-208ENST00000460627 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHRD-208ENST00000460627 DDRGK1Q96HY6 314 aa22.73■■□□□ 1.23
CHRD-208ENST00000460627 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
CHRD-208ENST00000460627 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
CHRD-208ENST00000460627 CASC1Q6TDU7 716 aa22.71■■□□□ 1.23
CHRD-208ENST00000460627 PANK3Q9H999 370 aa22.71■■□□□ 1.23
CHRD-208ENST00000460627 CHMP4AQ9BY43 222 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms