RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
KCNMA1-216ENST00000457953 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
KCNMA1-216ENST00000457953 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.46
KCNMA1-216ENST00000457953 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
KCNMA1-216ENST00000457953 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
KCNMA1-216ENST00000457953 RGS3P49796 1198 aa17.87■□□□□ 0.45
KCNMA1-216ENST00000457953 FMN1Q68DA7 1419 aa17.86■□□□□ 0.45
KCNMA1-216ENST00000457953 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
KCNMA1-216ENST00000457953 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
KCNMA1-216ENST00000457953 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.85■□□□□ 0.45
KCNMA1-216ENST00000457953 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
KCNMA1-216ENST00000457953 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.45
KCNMA1-216ENST00000457953 PKD2Q13563 968 aa17.82■□□□□ 0.44
KCNMA1-216ENST00000457953 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
KCNMA1-216ENST00000457953 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
KCNMA1-216ENST00000457953 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
KCNMA1-216ENST00000457953 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
KCNMA1-216ENST00000457953 ARID4BQ4LE39 1312 aaPredicted RBP17.8■□□□□ 0.44
KCNMA1-216ENST00000457953 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
KCNMA1-216ENST00000457953 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
KCNMA1-216ENST00000457953 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
KCNMA1-216ENST00000457953 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
KCNMA1-216ENST00000457953 ESF1Q9H501 851 aaKnown RBP17.77■□□□□ 0.44
KCNMA1-216ENST00000457953 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.44
KCNMA1-216ENST00000457953 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
KCNMA1-216ENST00000457953 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
KCNMA1-216ENST00000457953 FGD6Q6ZV73 1430 aa17.76■□□□□ 0.43
KCNMA1-216ENST00000457953 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
KCNMA1-216ENST00000457953 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
KCNMA1-216ENST00000457953 NAP1L5Q96NT1 182 aaPredicted RBP17.74■□□□□ 0.43
KCNMA1-216ENST00000457953 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
KCNMA1-216ENST00000457953 URB2Q14146 1524 aaKnown RBP17.73■□□□□ 0.43
KCNMA1-216ENST00000457953 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
KCNMA1-216ENST00000457953 NEUROD2Q15784 382 aa17.73■□□□□ 0.43
KCNMA1-216ENST00000457953 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
KCNMA1-216ENST00000457953 TRIM44Q96DX7 344 aaPredicted RBP17.71■□□□□ 0.43
KCNMA1-216ENST00000457953 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.42
KCNMA1-216ENST00000457953 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
KCNMA1-216ENST00000457953 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
KCNMA1-216ENST00000457953 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
KCNMA1-216ENST00000457953 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
KCNMA1-216ENST00000457953 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
KCNMA1-216ENST00000457953 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
KCNMA1-216ENST00000457953 SUPT6HQ7KZ85 1726 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-216ENST00000457953 EHBP1L1Q8N3D4 1523 aa17.68■□□□□ 0.42
KCNMA1-216ENST00000457953 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
KCNMA1-216ENST00000457953 NUP155O75694 1391 aa17.67■□□□□ 0.42
KCNMA1-216ENST00000457953 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
KCNMA1-216ENST00000457953 NCLP19338 710 aaKnown RBP17.67■□□□□ 0.42
KCNMA1-216ENST00000457953 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
KCNMA1-216ENST00000457953 GGT6Q6P531 493 aa17.66■□□□□ 0.42
KCNMA1-216ENST00000457953 PTPN23Q9H3S7 1636 aa17.66■□□□□ 0.42
KCNMA1-216ENST00000457953 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
KCNMA1-216ENST00000457953 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
KCNMA1-216ENST00000457953 SAFB2Q14151 953 aaKnown RBP eCLIP17.65■□□□□ 0.42
KCNMA1-216ENST00000457953 MLECQ14165 292 aa17.65■□□□□ 0.42
KCNMA1-216ENST00000457953 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
KCNMA1-216ENST00000457953 BECN1Q14457 450 aa17.64■□□□□ 0.41
KCNMA1-216ENST00000457953 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
KCNMA1-216ENST00000457953 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
KCNMA1-216ENST00000457953 CCER2I3L3R5 266 aa17.61■□□□□ 0.41
KCNMA1-216ENST00000457953 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
KCNMA1-216ENST00000457953 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
KCNMA1-216ENST00000457953 NAIPQ13075 1403 aa17.59■□□□□ 0.41
KCNMA1-216ENST00000457953 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
KCNMA1-216ENST00000457953 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
KCNMA1-216ENST00000457953 PTPRKQ15262 1439 aa17.58■□□□□ 0.4
KCNMA1-216ENST00000457953 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
KCNMA1-216ENST00000457953 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
KCNMA1-216ENST00000457953 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
KCNMA1-216ENST00000457953 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
KCNMA1-216ENST00000457953 KNSTRNQ9Y448 316 aa17.55■□□□□ 0.4
KCNMA1-216ENST00000457953 ARID3AQ99856 593 aa17.55■□□□□ 0.4
KCNMA1-216ENST00000457953 SLKQ9H2G2 1235 aaPredicted RBP17.55■□□□□ 0.4
KCNMA1-216ENST00000457953 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
KCNMA1-216ENST00000457953 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
KCNMA1-216ENST00000457953 KIF3BO15066 747 aa17.53■□□□□ 0.4
KCNMA1-216ENST00000457953 ZBTB7CA1YPR0 619 aa17.52■□□□□ 0.4
KCNMA1-216ENST00000457953 SLC4A3P48751 1232 aa17.52■□□□□ 0.4
KCNMA1-216ENST00000457953 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
KCNMA1-216ENST00000457953 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
KCNMA1-216ENST00000457953 DNTTIP2Q5QJE6 756 aaKnown RBP17.5■□□□□ 0.39
KCNMA1-216ENST00000457953 IL27Q8NEV9 243 aa17.5■□□□□ 0.39
KCNMA1-216ENST00000457953 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
KCNMA1-216ENST00000457953 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
KCNMA1-216ENST00000457953 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
KCNMA1-216ENST00000457953 STK26Q9P289 416 aa17.48■□□□□ 0.39
KCNMA1-216ENST00000457953 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
KCNMA1-216ENST00000457953 ADAMTS12P58397 1594 aa17.48■□□□□ 0.39
KCNMA1-216ENST00000457953 ST20-MTHFSA0A0A6YYL1 179 aa17.47■□□□□ 0.39
KCNMA1-216ENST00000457953 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-216ENST00000457953 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
KCNMA1-216ENST00000457953 IPO9Q96P70 1041 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-216ENST00000457953 EPRSP07814 1512 aaKnown RBP17.46■□□□□ 0.39
KCNMA1-216ENST00000457953 PTPRGP23470 1445 aa17.46■□□□□ 0.39
KCNMA1-216ENST00000457953 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.38
KCNMA1-216ENST00000457953 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
KCNMA1-216ENST00000457953 WDR62O43379 1518 aa17.43■□□□□ 0.38
KCNMA1-216ENST00000457953 GOLGA6L22H0YM25 854 aa17.43■□□□□ 0.38
KCNMA1-216ENST00000457953 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms