RNA–Protein interactions for RNA: ENST00000457563.6

SAMD3-205, Transcript of sterile alpha motif domain containing 3, human

TSL 2 BASIC

Gene SAMD3, Length 1,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMD3-205	ENST00000457563	NCOA1	Q15788	1441 aa		11.98	□□□□□ -0.49
SAMD3-205	ENST00000457563	CFAP74	Q9C0B2	1584 aa		11.97	□□□□□ -0.49
SAMD3-205	ENST00000457563	CEBPA	P49715	358 aa	Predicted RBP	11.95	□□□□□ -0.5
SAMD3-205	ENST00000457563	GOLGA3	Q08378	1498 aa		11.95	□□□□□ -0.5
SAMD3-205	ENST00000457563	ATP10B	O94823	1461 aa		11.94	□□□□□ -0.5
SAMD3-205	ENST00000457563	C3	P01024	1663 aa		11.93	□□□□□ -0.5
SAMD3-205	ENST00000457563	HECW1	Q76N89	1606 aa		11.91	□□□□□ -0.5
SAMD3-205	ENST00000457563	CTTNBP2	Q8WZ74	1663 aa		11.91	□□□□□ -0.5
SAMD3-205	ENST00000457563	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.91	□□□□□ -0.5
SAMD3-205	ENST00000457563	MSH5	O43196	834 aa		11.91	□□□□□ -0.5
SAMD3-205	ENST00000457563	C9orf84	Q5VXU9	1444 aa		11.9	□□□□□ -0.5
SAMD3-205	ENST00000457563	ATP10A	O60312	1499 aa		11.9	□□□□□ -0.5
SAMD3-205	ENST00000457563	CAMSAP1	Q5T5Y3	1602 aa		11.89	□□□□□ -0.51
SAMD3-205	ENST00000457563	RAPGEF2	Q9Y4G8	1499 aa		11.88	□□□□□ -0.51
SAMD3-205	ENST00000457563	TRAPPC8	Q9Y2L5	1435 aa		11.87	□□□□□ -0.51
SAMD3-205	ENST00000457563	SCAF1	Q9H7N4	1312 aa	Known RBP	11.87	□□□□□ -0.51
SAMD3-205	ENST00000457563	TOM1	O60784	492 aa		11.87	□□□□□ -0.51
SAMD3-205	ENST00000457563	PIP4K2B	P78356	416 aa		11.85	□□□□□ -0.51
SAMD3-205	ENST00000457563	RGS17	Q9UGC6	210 aa	Predicted RBP	11.85	□□□□□ -0.51
SAMD3-205	ENST00000457563	ARID3C	A6NKF2	412 aa		11.82	□□□□□ -0.52
SAMD3-205	ENST00000457563	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.82	□□□□□ -0.52
SAMD3-205	ENST00000457563	PLA2R1	Q13018	1463 aa		11.81	□□□□□ -0.52
SAMD3-205	ENST00000457563	CPS1	P31327	1500 aa		11.81	□□□□□ -0.52
SAMD3-205	ENST00000457563	PKD2	Q13563	968 aa		11.81	□□□□□ -0.52
SAMD3-205	ENST00000457563	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.81	□□□□□ -0.52
SAMD3-205	ENST00000457563	NCKAP5L	Q9HCH0	1330 aa		11.8	□□□□□ -0.52
SAMD3-205	ENST00000457563	RERE	Q9P2R6	1566 aa		11.8	□□□□□ -0.52
SAMD3-205	ENST00000457563	ZNF142	P52746	1687 aa	Predicted RBP	11.8	□□□□□ -0.52
SAMD3-205	ENST00000457563	TCOF1	Q13428	1488 aa	Known RBP	11.79	□□□□□ -0.52
SAMD3-205	ENST00000457563	PTPRK	Q15262	1439 aa		11.79	□□□□□ -0.52
SAMD3-205	ENST00000457563	RAPGEF6	Q8TEU7	1601 aa		11.78	□□□□□ -0.52
SAMD3-205	ENST00000457563	ALK	Q9UM73	1620 aa		11.78	□□□□□ -0.52
SAMD3-205	ENST00000457563	NPAT	Q14207	1427 aa		11.78	□□□□□ -0.52
SAMD3-205	ENST00000457563	AGL	P35573	1532 aa		11.77	□□□□□ -0.52
SAMD3-205	ENST00000457563	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.77	□□□□□ -0.52
SAMD3-205	ENST00000457563	SETD1A	O15047	1707 aa	Known RBP	11.77	□□□□□ -0.53
SAMD3-205	ENST00000457563	SCAPER	Q9BY12	1400 aa		11.77	□□□□□ -0.53
SAMD3-205	ENST00000457563	MROH2A	A6NES4	1674 aa		11.76	□□□□□ -0.53
SAMD3-205	ENST00000457563	CNTLN	Q9NXG0	1405 aa		11.75	□□□□□ -0.53
SAMD3-205	ENST00000457563	PPP6R1	Q9UPN7	881 aa		11.75	□□□□□ -0.53
SAMD3-205	ENST00000457563	POTEA	Q6S8J7	498 aa		11.74	□□□□□ -0.53
SAMD3-205	ENST00000457563	DIP2C	Q9Y2E4	1556 aa		11.73	□□□□□ -0.53
SAMD3-205	ENST00000457563	ESF1	Q9H501	851 aa	Known RBP	11.73	□□□□□ -0.53
SAMD3-205	ENST00000457563	MYO3A	Q8NEV4	1616 aa		11.72	□□□□□ -0.53
SAMD3-205	ENST00000457563	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.72	□□□□□ -0.53
SAMD3-205	ENST00000457563	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.72	□□□□□ -0.53
SAMD3-205	ENST00000457563	SHANK2	Q9UPX8	1470 aa		11.71	□□□□□ -0.53
SAMD3-205	ENST00000457563	KDM5C	P41229	1560 aa		11.71	□□□□□ -0.53
SAMD3-205	ENST00000457563	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.71	□□□□□ -0.54
SAMD3-205	ENST00000457563	NUP153	P49790	1475 aa	Known RBP	11.7	□□□□□ -0.54
SAMD3-205	ENST00000457563	POLR1A	O95602	1720 aa	Predicted RBP	11.7	□□□□□ -0.54
SAMD3-205	ENST00000457563	PLEKHD1	A6NEE1	506 aa		11.7	□□□□□ -0.54
SAMD3-205	ENST00000457563	ZNF518A	Q6AHZ1	1483 aa		11.69	□□□□□ -0.54
SAMD3-205	ENST00000457563	PLCH2	O75038	1416 aa		11.68	□□□□□ -0.54
SAMD3-205	ENST00000457563	ABCA6	Q8N139	1617 aa		11.68	□□□□□ -0.54
SAMD3-205	ENST00000457563	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
SAMD3-205	ENST00000457563	SAMD9	Q5K651	1589 aa		11.66	□□□□□ -0.54
SAMD3-205	ENST00000457563	RNF17	Q9BXT8	1623 aa	Known RBP	11.66	□□□□□ -0.54
SAMD3-205	ENST00000457563	MYO5C	Q9NQX4	1742 aa		11.66	□□□□□ -0.54
SAMD3-205	ENST00000457563	VWDE	Q8N2E2	1590 aa		11.65	□□□□□ -0.54
SAMD3-205	ENST00000457563	NEURL4	Q96JN8	1562 aa		11.64	□□□□□ -0.55
SAMD3-205	ENST00000457563	ZMYM3	Q14202	1370 aa		11.63	□□□□□ -0.55
SAMD3-205	ENST00000457563	MLH3	Q9UHC1	1453 aa		11.63	□□□□□ -0.55
SAMD3-205	ENST00000457563	EFCAB2	Q5VUJ9	269 aa		11.62	□□□□□ -0.55
SAMD3-205	ENST00000457563	P3H3	Q8IVL6	736 aa		11.62	□□□□□ -0.55
SAMD3-205	ENST00000457563	DNMT1	P26358	1616 aa	Known RBP	11.61	□□□□□ -0.55
SAMD3-205	ENST00000457563	SYNM	O15061	1565 aa		11.61	□□□□□ -0.55
SAMD3-205	ENST00000457563	SUPT5H	O00267	1087 aa	Known RBP	11.6	□□□□□ -0.55
SAMD3-205	ENST00000457563	A2ML1	A8K2U0	1454 aa		11.6	□□□□□ -0.55
SAMD3-205	ENST00000457563	CLTC	Q00610	1675 aa	Known RBP	11.59	□□□□□ -0.55
SAMD3-205	ENST00000457563	AFAP1	Q8N556	730 aa		11.58	□□□□□ -0.56
SAMD3-205	ENST00000457563	STRCP1	A6NGW2	1772 aa		11.58	□□□□□ -0.56
SAMD3-205	ENST00000457563	MYT1L	Q9UL68	1186 aa		11.57	□□□□□ -0.56
SAMD3-205	ENST00000457563	LRRC7	Q96NW7	1537 aa		11.57	□□□□□ -0.56
SAMD3-205	ENST00000457563	KIDINS220	Q9ULH0	1771 aa		11.56	□□□□□ -0.56
SAMD3-205	ENST00000457563	DEPDC5	O75140	1603 aa		11.54	□□□□□ -0.56
SAMD3-205	ENST00000457563	PRX	Q9BXM0	1461 aa		11.54	□□□□□ -0.56
SAMD3-205	ENST00000457563	MED14	O60244	1454 aa		11.53	□□□□□ -0.56
SAMD3-205	ENST00000457563	ARHGAP5	Q13017	1502 aa		11.52	□□□□□ -0.57
SAMD3-205	ENST00000457563	FAM135B	Q49AJ0	1406 aa		11.52	□□□□□ -0.57
SAMD3-205	ENST00000457563	ITSN2	Q9NZM3	1697 aa		11.52	□□□□□ -0.57
SAMD3-205	ENST00000457563	IQGAP1	P46940	1657 aa		11.51	□□□□□ -0.57
SAMD3-205	ENST00000457563	XIRP1	Q702N8	1843 aa	Known RBP	11.5	□□□□□ -0.57
SAMD3-205	ENST00000457563	NPHP4	O75161	1426 aa	Predicted RBP	11.5	□□□□□ -0.57
SAMD3-205	ENST00000457563	CDK13	Q14004	1512 aa	Known RBP	11.5	□□□□□ -0.57
SAMD3-205	ENST00000457563	ANKLE2	Q86XL3	938 aa		11.49	□□□□□ -0.57
SAMD3-205	ENST00000457563	CDC42BPB	Q9Y5S2	1711 aa		11.48	□□□□□ -0.57
SAMD3-205	ENST00000457563	ABCC1	P33527	1531 aa		11.48	□□□□□ -0.57
SAMD3-205	ENST00000457563	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.47	□□□□□ -0.57
SAMD3-205	ENST00000457563	KIF14	Q15058	1648 aa		11.47	□□□□□ -0.57
SAMD3-205	ENST00000457563	TRIM52	Q96A61	297 aa		11.46	□□□□□ -0.58
SAMD3-205	ENST00000457563	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
SAMD3-205	ENST00000457563	PLXNC1	O60486	1568 aa		11.45	□□□□□ -0.58
SAMD3-205	ENST00000457563	ROBO1	Q9Y6N7	1651 aa		11.45	□□□□□ -0.58
SAMD3-205	ENST00000457563	ZNF772	Q68DY9	489 aa	Predicted RBP	11.44	□□□□□ -0.58
SAMD3-205	ENST00000457563	ZC3H13	Q5T200	1668 aa	Known RBP	11.42	□□□□□ -0.58
SAMD3-205	ENST00000457563	PREX2	Q70Z35	1606 aa		11.42	□□□□□ -0.58
SAMD3-205	ENST00000457563	TNR	Q92752	1358 aa		11.42	□□□□□ -0.58
SAMD3-205	ENST00000457563	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.42	□□□□□ -0.58
SAMD3-205	ENST00000457563	SAMD9L	Q8IVG5	1584 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms