RNA–Protein interactions for RNA: ENST00000457563.6

SAMD3-205, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 2 BASIC

Gene SAMD3, Length 1,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-205ENST00000457563 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
SAMD3-205ENST00000457563 ABCC9O60706 1549 aa16.98■□□□□ 0.31
SAMD3-205ENST00000457563 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
SAMD3-205ENST00000457563 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
SAMD3-205ENST00000457563 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
SAMD3-205ENST00000457563 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
SAMD3-205ENST00000457563 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
SAMD3-205ENST00000457563 NACADO15069 1562 aa15.58■□□□□ 0.08
SAMD3-205ENST00000457563 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
SAMD3-205ENST00000457563 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
SAMD3-205ENST00000457563 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
SAMD3-205ENST00000457563 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
SAMD3-205ENST00000457563 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
SAMD3-205ENST00000457563 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
SAMD3-205ENST00000457563 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
SAMD3-205ENST00000457563 CUX2O14529 1486 aa15.09■□□□□ 0.01
SAMD3-205ENST00000457563 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
SAMD3-205ENST00000457563 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
SAMD3-205ENST00000457563 AEBP2Q6ZN18 517 aaPredicted RBP14.85□□□□□ -0.03
SAMD3-205ENST00000457563 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
SAMD3-205ENST00000457563 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
SAMD3-205ENST00000457563 DCAF1Q9Y4B6 1507 aa14.58□□□□□ -0.07
SAMD3-205ENST00000457563 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
SAMD3-205ENST00000457563 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
SAMD3-205ENST00000457563 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
SAMD3-205ENST00000457563 NESP48681 1621 aa14.35□□□□□ -0.11
SAMD3-205ENST00000457563 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
SAMD3-205ENST00000457563 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
SAMD3-205ENST00000457563 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
SAMD3-205ENST00000457563 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
SAMD3-205ENST00000457563 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
SAMD3-205ENST00000457563 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
SAMD3-205ENST00000457563 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
SAMD3-205ENST00000457563 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
SAMD3-205ENST00000457563 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
SAMD3-205ENST00000457563 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
SAMD3-205ENST00000457563 PDS5BQ9NTI5 1447 aa14.1□□□□□ -0.15
SAMD3-205ENST00000457563 WDR62O43379 1518 aa14.07□□□□□ -0.16
SAMD3-205ENST00000457563 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
SAMD3-205ENST00000457563 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
SAMD3-205ENST00000457563 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
SAMD3-205ENST00000457563 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
SAMD3-205ENST00000457563 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
SAMD3-205ENST00000457563 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
SAMD3-205ENST00000457563 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
SAMD3-205ENST00000457563 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
SAMD3-205ENST00000457563 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
SAMD3-205ENST00000457563 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
SAMD3-205ENST00000457563 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
SAMD3-205ENST00000457563 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
SAMD3-205ENST00000457563 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
SAMD3-205ENST00000457563 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
SAMD3-205ENST00000457563 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
SAMD3-205ENST00000457563 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
SAMD3-205ENST00000457563 CHD1O14646 1710 aa13.62□□□□□ -0.23
SAMD3-205ENST00000457563 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
SAMD3-205ENST00000457563 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
SAMD3-205ENST00000457563 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
SAMD3-205ENST00000457563 CFTRP13569 1480 aa13.53□□□□□ -0.24
SAMD3-205ENST00000457563 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
SAMD3-205ENST00000457563 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
SAMD3-205ENST00000457563 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
SAMD3-205ENST00000457563 WIZO95785 1651 aa13.36□□□□□ -0.27
SAMD3-205ENST00000457563 FBLN2P98095 1184 aa13.36□□□□□ -0.27
SAMD3-205ENST00000457563 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
SAMD3-205ENST00000457563 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
SAMD3-205ENST00000457563 AQRO60306 1485 aaKnown RBP eCLIP13.33□□□□□ -0.28
SAMD3-205ENST00000457563 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
SAMD3-205ENST00000457563 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
SAMD3-205ENST00000457563 KIF13AQ9H1H9 1805 aa13.32□□□□□ -0.28
SAMD3-205ENST00000457563 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
SAMD3-205ENST00000457563 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
SAMD3-205ENST00000457563 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
SAMD3-205ENST00000457563 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
SAMD3-205ENST00000457563 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
SAMD3-205ENST00000457563 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
SAMD3-205ENST00000457563 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
SAMD3-205ENST00000457563 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
SAMD3-205ENST00000457563 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
SAMD3-205ENST00000457563 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
SAMD3-205ENST00000457563 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
SAMD3-205ENST00000457563 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
SAMD3-205ENST00000457563 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
SAMD3-205ENST00000457563 KDM6BO15054 1643 aa13.13□□□□□ -0.31
SAMD3-205ENST00000457563 TDRD9Q8NDG6 1382 aaKnown RBP13.1□□□□□ -0.31
SAMD3-205ENST00000457563 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
SAMD3-205ENST00000457563 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
SAMD3-205ENST00000457563 ABCC10Q5T3U5 1492 aa13.07□□□□□ -0.32
SAMD3-205ENST00000457563 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
SAMD3-205ENST00000457563 SOGA1O94964 1423 aa13.05□□□□□ -0.32
SAMD3-205ENST00000457563 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
SAMD3-205ENST00000457563 DIP2BQ9P265 1576 aa13.02□□□□□ -0.32
SAMD3-205ENST00000457563 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.32
SAMD3-205ENST00000457563 CEP170Q5SW79 1584 aa13.02□□□□□ -0.33
SAMD3-205ENST00000457563 SOCS7O14512 581 aa13.02□□□□□ -0.33
SAMD3-205ENST00000457563 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
SAMD3-205ENST00000457563 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
SAMD3-205ENST00000457563 MAPKBP1O60336 1514 aa12.99□□□□□ -0.33
SAMD3-205ENST00000457563 TSPOAP1O95153 1857 aa12.98□□□□□ -0.33
SAMD3-205ENST00000457563 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 509.7 ms