RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 KIAA0556O60303 1618 aa9.7□□□□□ -0.86
MDH1-208ENST00000454035 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
MDH1-208ENST00000454035 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
MDH1-208ENST00000454035 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.69□□□□□ -0.86
MDH1-208ENST00000454035 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
MDH1-208ENST00000454035 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
MDH1-208ENST00000454035 FAM69CQ0P6D2 419 aa9.68□□□□□ -0.86
MDH1-208ENST00000454035 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
MDH1-208ENST00000454035 UHRF1BP1LA0JNW5 1464 aa9.67□□□□□ -0.86
MDH1-208ENST00000454035 UACAQ9BZF9 1416 aa9.67□□□□□ -0.86
MDH1-208ENST00000454035 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
MDH1-208ENST00000454035 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
MDH1-208ENST00000454035 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
MDH1-208ENST00000454035 UBTFP17480 764 aaKnown RBP9.66□□□□□ -0.86
MDH1-208ENST00000454035 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
MDH1-208ENST00000454035 KDM2AQ9Y2K7 1162 aa9.66□□□□□ -0.86
MDH1-208ENST00000454035 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
MDH1-208ENST00000454035 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
MDH1-208ENST00000454035 SAMD9Q5K651 1589 aa9.65□□□□□ -0.86
MDH1-208ENST00000454035 ABCC2Q92887 1545 aa9.65□□□□□ -0.86
MDH1-208ENST00000454035 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
MDH1-208ENST00000454035 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
MDH1-208ENST00000454035 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
MDH1-208ENST00000454035 MAPKBP1O60336 1514 aa9.64□□□□□ -0.87
MDH1-208ENST00000454035 KDM5BQ9UGL1 1544 aa9.63□□□□□ -0.87
MDH1-208ENST00000454035 PLB1Q6P1J6 1458 aa9.63□□□□□ -0.87
MDH1-208ENST00000454035 RGL2O15211 777 aa9.62□□□□□ -0.87
MDH1-208ENST00000454035 ABCA8O94911 1581 aa9.62□□□□□ -0.87
MDH1-208ENST00000454035 RANGAP1P46060 587 aaPredicted RBP9.61□□□□□ -0.87
MDH1-208ENST00000454035 MIER1Q8N108 512 aa9.6□□□□□ -0.87
MDH1-208ENST00000454035 PPRC1Q5VV67 1664 aaKnown RBP9.6□□□□□ -0.87
MDH1-208ENST00000454035 EFCAB5A4FU69 1503 aa9.6□□□□□ -0.87
MDH1-208ENST00000454035 FHOD3Q2V2M9 1422 aa9.59□□□□□ -0.87
MDH1-208ENST00000454035 GABBR2O75899 941 aa9.59□□□□□ -0.87
MDH1-208ENST00000454035 ASXL2Q76L83 1435 aa9.58□□□□□ -0.88
MDH1-208ENST00000454035 SSUH2Q9Y2M2 353 aa9.58□□□□□ -0.88
MDH1-208ENST00000454035 ARHGAP35Q9NRY4 1499 aa9.58□□□□□ -0.88
MDH1-208ENST00000454035 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
MDH1-208ENST00000454035 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
MDH1-208ENST00000454035 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
MDH1-208ENST00000454035 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
MDH1-208ENST00000454035 ATP10BO94823 1461 aa9.56□□□□□ -0.88
MDH1-208ENST00000454035 ADGRL1O94910 1474 aa9.56□□□□□ -0.88
MDH1-208ENST00000454035 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
MDH1-208ENST00000454035 RAPGEF6Q8TEU7 1601 aa9.54□□□□□ -0.88
MDH1-208ENST00000454035 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
MDH1-208ENST00000454035 GLI2P10070 1586 aa9.54□□□□□ -0.88
MDH1-208ENST00000454035 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
MDH1-208ENST00000454035 WDR7Q9Y4E6 1490 aa9.53□□□□□ -0.88
MDH1-208ENST00000454035 EPRSP07814 1512 aaKnown RBP9.53□□□□□ -0.88
MDH1-208ENST00000454035 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
MDH1-208ENST00000454035 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
MDH1-208ENST00000454035 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
MDH1-208ENST00000454035 CIZ1Q9ULV3 898 aaPredicted RBP9.52□□□□□ -0.89
MDH1-208ENST00000454035 LOC105371045A0A1W2PR82 267 aa9.51□□□□□ -0.89
MDH1-208ENST00000454035 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
MDH1-208ENST00000454035 CLIP1P30622 1438 aa9.5□□□□□ -0.89
MDH1-208ENST00000454035 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
MDH1-208ENST00000454035 CHGAP10645 457 aaKnown RBP9.5□□□□□ -0.89
MDH1-208ENST00000454035 KCNH8Q96L42 1107 aa9.5□□□□□ -0.89
MDH1-208ENST00000454035 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
MDH1-208ENST00000454035 MAP3K4Q9Y6R4 1608 aa9.47□□□□□ -0.89
MDH1-208ENST00000454035 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
MDH1-208ENST00000454035 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
MDH1-208ENST00000454035 CEP162Q5TB80 1403 aa9.46□□□□□ -0.9
MDH1-208ENST00000454035 CD109Q6YHK3 1445 aa9.46□□□□□ -0.9
MDH1-208ENST00000454035 PRKAR2AP13861 404 aaKnown RBP9.45□□□□□ -0.9
MDH1-208ENST00000454035 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
MDH1-208ENST00000454035 MAGI3Q5TCQ9 1506 aa9.45□□□□□ -0.9
MDH1-208ENST00000454035 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
MDH1-208ENST00000454035 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
MDH1-208ENST00000454035 CDK11AQ9UQ88 783 aaPredicted RBP9.44□□□□□ -0.9
MDH1-208ENST00000454035 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
MDH1-208ENST00000454035 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
MDH1-208ENST00000454035 TEX14Q8IWB6 1497 aa9.43□□□□□ -0.9
MDH1-208ENST00000454035 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
MDH1-208ENST00000454035 FYCO1Q9BQS8 1478 aa9.42□□□□□ -0.9
MDH1-208ENST00000454035 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
MDH1-208ENST00000454035 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
MDH1-208ENST00000454035 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
MDH1-208ENST00000454035 PHLDB1Q86UU1 1377 aa9.4□□□□□ -0.9
MDH1-208ENST00000454035 TROQ12816 1431 aaPredicted RBP9.39□□□□□ -0.91
MDH1-208ENST00000454035 LRRIQ1Q96JM4 1722 aa9.39□□□□□ -0.91
MDH1-208ENST00000454035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.39□□□□□ -0.914e-6■■□□□ 14.3
MDH1-208ENST00000454035 NEO1Q92859 1461 aa9.37□□□□□ -0.91
MDH1-208ENST00000454035 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
MDH1-208ENST00000454035 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
MDH1-208ENST00000454035 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
MDH1-208ENST00000454035 PLCH2O75038 1416 aa9.36□□□□□ -0.91
MDH1-208ENST00000454035 TTC37Q6PGP7 1564 aa9.35□□□□□ -0.91
MDH1-208ENST00000454035 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
MDH1-208ENST00000454035 FBXO41Q8TF61 875 aa9.35□□□□□ -0.91
MDH1-208ENST00000454035 KIF14Q15058 1648 aa9.34□□□□□ -0.91
MDH1-208ENST00000454035 AKNAQ7Z591 1439 aa9.33□□□□□ -0.92
MDH1-208ENST00000454035 POTEMA6NI47 508 aa9.33□□□□□ -0.92
MDH1-208ENST00000454035 EFCAB2Q5VUJ9 269 aa9.33□□□□□ -0.92
MDH1-208ENST00000454035 RNF25Q96BH1 459 aaPredicted RBP9.33□□□□□ -0.92
MDH1-208ENST00000454035 FANCAO15360 1455 aa9.33□□□□□ -0.92
MDH1-208ENST00000454035 RAPGEF3O95398 923 aa9.32□□□□□ -0.92
MDH1-208ENST00000454035 MTUS2Q5JR59 1369 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms