RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
SHANK2-210ENST00000449116 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
SHANK2-210ENST00000449116 CDC42BPBQ9Y5S2 1711 aa22.46■■□□□ 1.19
SHANK2-210ENST00000449116 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
SHANK2-210ENST00000449116 RRBP1Q9P2E9 1410 aaKnown RBP22.43■■□□□ 1.18
SHANK2-210ENST00000449116 FANCAO15360 1455 aa22.42■■□□□ 1.18
SHANK2-210ENST00000449116 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
SHANK2-210ENST00000449116 PTPN23Q9H3S7 1636 aa22.4■■□□□ 1.18
SHANK2-210ENST00000449116 TEX14Q8IWB6 1497 aa22.4■■□□□ 1.18
SHANK2-210ENST00000449116 CFAP74Q9C0B2 1584 aa22.39■■□□□ 1.18
SHANK2-210ENST00000449116 TCOF1Q13428 1488 aaKnown RBP22.39■■□□□ 1.17
SHANK2-210ENST00000449116 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
SHANK2-210ENST00000449116 CAMSAP2Q08AD1 1489 aa22.38■■□□□ 1.17
SHANK2-210ENST00000449116 NEO1Q92859 1461 aa22.38■■□□□ 1.17
SHANK2-210ENST00000449116 TSPOAP1O95153 1857 aa22.38■■□□□ 1.17
SHANK2-210ENST00000449116 SAMD9LQ8IVG5 1584 aa22.37■■□□□ 1.17
SHANK2-210ENST00000449116 ZNF644Q9H582 1327 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-210ENST00000449116 PLEKHH2Q8IVE3 1493 aa22.35■■□□□ 1.17
SHANK2-210ENST00000449116 AKNAQ7Z591 1439 aa22.35■■□□□ 1.17
SHANK2-210ENST00000449116 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
SHANK2-210ENST00000449116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.17
SHANK2-210ENST00000449116 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
SHANK2-210ENST00000449116 ABCC1P33527 1531 aa22.32■■□□□ 1.16
SHANK2-210ENST00000449116 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
SHANK2-210ENST00000449116 SYCP2Q9BX26 1530 aa22.29■■□□□ 1.16
SHANK2-210ENST00000449116 SCAPERQ9BY12 1400 aa22.28■■□□□ 1.16
SHANK2-210ENST00000449116 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
SHANK2-210ENST00000449116 ARHGEF12Q9NZN5 1544 aa22.27■■□□□ 1.16
SHANK2-210ENST00000449116 HNRNPMP52272 730 aaKnown RBP eCLIP22.27■■□□□ 1.164e-9■■■■■ 39.3
SHANK2-210ENST00000449116 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.16
SHANK2-210ENST00000449116 ARHGEF5Q12774 1597 aa22.26■■□□□ 1.15
SHANK2-210ENST00000449116 RSPH4AQ5TD94 716 aa22.26■■□□□ 1.15
SHANK2-210ENST00000449116 DNMT1P26358 1616 aaKnown RBP22.24■■□□□ 1.15
SHANK2-210ENST00000449116 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
SHANK2-210ENST00000449116 DAPK1P53355 1430 aa22.23■■□□□ 1.15
SHANK2-210ENST00000449116 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
SHANK2-210ENST00000449116 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-210ENST00000449116 ABCC5O15440 1437 aa22.22■■□□□ 1.15
SHANK2-210ENST00000449116 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
SHANK2-210ENST00000449116 ZNF518AQ6AHZ1 1483 aa22.19■■□□□ 1.14
SHANK2-210ENST00000449116 ITGAEP38570 1179 aa22.18■■□□□ 1.14
SHANK2-210ENST00000449116 AFAP1Q8N556 730 aa22.18■■□□□ 1.14
SHANK2-210ENST00000449116 SHANK2Q9UPX8 1470 aa22.17■■□□□ 1.14
SHANK2-210ENST00000449116 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
SHANK2-210ENST00000449116 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
SHANK2-210ENST00000449116 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
SHANK2-210ENST00000449116 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
SHANK2-210ENST00000449116 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
SHANK2-210ENST00000449116 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
SHANK2-210ENST00000449116 KDM5CP41229 1560 aa22.15■■□□□ 1.14
SHANK2-210ENST00000449116 RICTORQ6R327 1708 aa22.14■■□□□ 1.14
SHANK2-210ENST00000449116 FRMPD1Q5SYB0 1578 aa22.14■■□□□ 1.13
SHANK2-210ENST00000449116 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.13
SHANK2-210ENST00000449116 MAST1Q9Y2H9 1570 aa22.12■■□□□ 1.13
SHANK2-210ENST00000449116 SPAG9O60271 1321 aaKnown RBP22.12■■□□□ 1.13
SHANK2-210ENST00000449116 KDM6BO15054 1643 aa22.12■■□□□ 1.13
SHANK2-210ENST00000449116 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
SHANK2-210ENST00000449116 RTEL1-TNFRSF6BF6WH68 1400 aa22.1■■□□□ 1.13
SHANK2-210ENST00000449116 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
SHANK2-210ENST00000449116 ZMYM4Q5VZL5 1548 aa22.09■■□□□ 1.13
SHANK2-210ENST00000449116 ZFYVE16Q7Z3T8 1539 aa22.09■■□□□ 1.13
SHANK2-210ENST00000449116 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
SHANK2-210ENST00000449116 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.13
SHANK2-210ENST00000449116 ROCK1Q13464 1354 aa22.08■■□□□ 1.12
SHANK2-210ENST00000449116 INO80Q9ULG1 1556 aaPredicted RBP22.08■■□□□ 1.12
SHANK2-210ENST00000449116 ATP7AQ04656 1500 aa22.07■■□□□ 1.12
SHANK2-210ENST00000449116 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
SHANK2-210ENST00000449116 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
SHANK2-210ENST00000449116 MYT1LQ9UL68 1186 aa22.06■■□□□ 1.12
SHANK2-210ENST00000449116 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
SHANK2-210ENST00000449116 MAGI2Q86UL8 1455 aa22.05■■□□□ 1.12
SHANK2-210ENST00000449116 NCOA1Q15788 1441 aa22.05■■□□□ 1.12
SHANK2-210ENST00000449116 KIDINS220Q9ULH0 1771 aa22.03■■□□□ 1.12
SHANK2-210ENST00000449116 PLXNC1O60486 1568 aa22.03■■□□□ 1.12
SHANK2-210ENST00000449116 RRP7BPQ9NSQ0 103 aa22.01■■□□□ 1.11
SHANK2-210ENST00000449116 KIF15Q9NS87 1388 aa22■■□□□ 1.11
SHANK2-210ENST00000449116 HFM1A2PYH4 1435 aa22■■□□□ 1.11
SHANK2-210ENST00000449116 YEATS2Q9ULM3 1422 aa21.99■■□□□ 1.11
SHANK2-210ENST00000449116 ABCA6Q8N139 1617 aa21.97■■□□□ 1.11
SHANK2-210ENST00000449116 NAIPQ13075 1403 aa21.97■■□□□ 1.11
SHANK2-210ENST00000449116 DIP2CQ9Y2E4 1556 aa21.96■■□□□ 1.11
SHANK2-210ENST00000449116 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
SHANK2-210ENST00000449116 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
SHANK2-210ENST00000449116 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.1
SHANK2-210ENST00000449116 ATP10AO60312 1499 aa21.93■■□□□ 1.1
SHANK2-210ENST00000449116 SETD5Q9C0A6 1442 aa21.93■■□□□ 1.1
SHANK2-210ENST00000449116 A2MP01023 1474 aa21.92■■□□□ 1.1
SHANK2-210ENST00000449116 ANKRD50Q9ULJ7 1429 aa21.92■■□□□ 1.1
SHANK2-210ENST00000449116 DHX29Q7Z478 1369 aaKnown RBP21.92■■□□□ 1.1
SHANK2-210ENST00000449116 ERBINQ96RT1 1412 aa21.91■■□□□ 1.1
SHANK2-210ENST00000449116 REREQ9P2R6 1566 aa21.89■■□□□ 1.09
SHANK2-210ENST00000449116 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
SHANK2-210ENST00000449116 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
SHANK2-210ENST00000449116 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
SHANK2-210ENST00000449116 HRCP23327 699 aa21.82■■□□□ 1.08
SHANK2-210ENST00000449116 AGLP35573 1532 aa21.81■■□□□ 1.08
SHANK2-210ENST00000449116 KIF3BO15066 747 aa21.8■■□□□ 1.08
SHANK2-210ENST00000449116 BCORL1Q5H9F3 1711 aa21.8■■□□□ 1.08
SHANK2-210ENST00000449116 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
SHANK2-210ENST00000449116 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms