RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
BRPF3-203ENST00000441123 TRIM44Q96DX7 344 aaPredicted RBP16.61■□□□□ 0.25
BRPF3-203ENST00000441123 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
BRPF3-203ENST00000441123 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
BRPF3-203ENST00000441123 EFCAB2Q5VUJ9 269 aa16.6■□□□□ 0.25
BRPF3-203ENST00000441123 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
BRPF3-203ENST00000441123 IGF1RP08069 1367 aa16.59■□□□□ 0.25
BRPF3-203ENST00000441123 FOXD1Q16676 465 aa16.59■□□□□ 0.25
BRPF3-203ENST00000441123 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
BRPF3-203ENST00000441123 MORC1Q86VD1 984 aa16.58■□□□□ 0.25
BRPF3-203ENST00000441123 RCAN3Q9UKA8 241 aa16.58■□□□□ 0.24
BRPF3-203ENST00000441123 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
BRPF3-203ENST00000441123 KIF15Q9NS87 1388 aa16.58■□□□□ 0.24
BRPF3-203ENST00000441123 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
BRPF3-203ENST00000441123 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
BRPF3-203ENST00000441123 RGS3P49796 1198 aa16.57■□□□□ 0.24
BRPF3-203ENST00000441123 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
BRPF3-203ENST00000441123 HAP1P54257 671 aaPredicted RBP16.56■□□□□ 0.24
BRPF3-203ENST00000441123 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
BRPF3-203ENST00000441123 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
BRPF3-203ENST00000441123 LRRC9Q6ZRR7 1453 aa16.55■□□□□ 0.24
BRPF3-203ENST00000441123 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
BRPF3-203ENST00000441123 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
BRPF3-203ENST00000441123 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
BRPF3-203ENST00000441123 ARXQ96QS3 562 aa16.54■□□□□ 0.24
BRPF3-203ENST00000441123 FGD6Q6ZV73 1430 aa16.54■□□□□ 0.24
BRPF3-203ENST00000441123 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
BRPF3-203ENST00000441123 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
BRPF3-203ENST00000441123 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
BRPF3-203ENST00000441123 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
BRPF3-203ENST00000441123 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
BRPF3-203ENST00000441123 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.23
BRPF3-203ENST00000441123 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.23
BRPF3-203ENST00000441123 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
BRPF3-203ENST00000441123 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
BRPF3-203ENST00000441123 MYBBP1AQ9BQG0 1328 aaKnown RBP16.51■□□□□ 0.23
BRPF3-203ENST00000441123 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
BRPF3-203ENST00000441123 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
BRPF3-203ENST00000441123 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
BRPF3-203ENST00000441123 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
BRPF3-203ENST00000441123 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
BRPF3-203ENST00000441123 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
BRPF3-203ENST00000441123 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
BRPF3-203ENST00000441123 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
BRPF3-203ENST00000441123 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
BRPF3-203ENST00000441123 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
BRPF3-203ENST00000441123 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
BRPF3-203ENST00000441123 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
BRPF3-203ENST00000441123 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
BRPF3-203ENST00000441123 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
BRPF3-203ENST00000441123 PTMSP20962 102 aa16.46■□□□□ 0.22
BRPF3-203ENST00000441123 CFTRP13569 1480 aa16.45■□□□□ 0.22
BRPF3-203ENST00000441123 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
BRPF3-203ENST00000441123 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
BRPF3-203ENST00000441123 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
BRPF3-203ENST00000441123 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
BRPF3-203ENST00000441123 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
BRPF3-203ENST00000441123 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
BRPF3-203ENST00000441123 SPAG9O60271 1321 aaKnown RBP16.43■□□□□ 0.22
BRPF3-203ENST00000441123 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
BRPF3-203ENST00000441123 USP47Q96K76 1375 aa16.42■□□□□ 0.22
BRPF3-203ENST00000441123 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
BRPF3-203ENST00000441123 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
BRPF3-203ENST00000441123 DEKP35659 375 aaKnown RBP16.4■□□□□ 0.22
BRPF3-203ENST00000441123 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
BRPF3-203ENST00000441123 NCOA2Q15596 1464 aa16.39■□□□□ 0.21
BRPF3-203ENST00000441123 MCCP23508 829 aa16.39■□□□□ 0.21
BRPF3-203ENST00000441123 PTMAP06454 111 aaKnown RBP16.39■□□□□ 0.21
BRPF3-203ENST00000441123 GGT6Q6P531 493 aa16.37■□□□□ 0.21
BRPF3-203ENST00000441123 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
BRPF3-203ENST00000441123 MIA2Q96PC5 1412 aa16.37■□□□□ 0.21
BRPF3-203ENST00000441123 CNTLNQ9NXG0 1405 aa16.37■□□□□ 0.21
BRPF3-203ENST00000441123 STAC3Q96MF2 364 aa16.36■□□□□ 0.21
BRPF3-203ENST00000441123 PTPRGP23470 1445 aa16.36■□□□□ 0.21
BRPF3-203ENST00000441123 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
BRPF3-203ENST00000441123 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
BRPF3-203ENST00000441123 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
BRPF3-203ENST00000441123 KIF3BO15066 747 aa16.35■□□□□ 0.21
BRPF3-203ENST00000441123 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
BRPF3-203ENST00000441123 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
BRPF3-203ENST00000441123 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
BRPF3-203ENST00000441123 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
BRPF3-203ENST00000441123 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
BRPF3-203ENST00000441123 CCDC7Q96M83 1385 aa16.34■□□□□ 0.21
BRPF3-203ENST00000441123 CENPJQ9HC77 1338 aaPredicted RBP16.33■□□□□ 0.21
BRPF3-203ENST00000441123 RTF1Q92541 710 aaKnown RBP16.32■□□□□ 0.2
BRPF3-203ENST00000441123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
BRPF3-203ENST00000441123 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
BRPF3-203ENST00000441123 CENPQQ7L2Z9 268 aaPredicted RBP16.31■□□□□ 0.2
BRPF3-203ENST00000441123 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
BRPF3-203ENST00000441123 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
BRPF3-203ENST00000441123 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
BRPF3-203ENST00000441123 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
BRPF3-203ENST00000441123 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
BRPF3-203ENST00000441123 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
BRPF3-203ENST00000441123 PANK3Q9H999 370 aa16.29■□□□□ 0.2
BRPF3-203ENST00000441123 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
BRPF3-203ENST00000441123 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
BRPF3-203ENST00000441123 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
BRPF3-203ENST00000441123 CDK11BP21127 795 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms