RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
BRPF3-203ENST00000441123 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
BRPF3-203ENST00000441123 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
BRPF3-203ENST00000441123 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
BRPF3-203ENST00000441123 APLP2Q06481 763 aa20.08■□□□□ 0.81
BRPF3-203ENST00000441123 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
BRPF3-203ENST00000441123 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
BRPF3-203ENST00000441123 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
BRPF3-203ENST00000441123 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
BRPF3-203ENST00000441123 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
BRPF3-203ENST00000441123 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
BRPF3-203ENST00000441123 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
BRPF3-203ENST00000441123 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
BRPF3-203ENST00000441123 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
BRPF3-203ENST00000441123 TTBK1Q5TCY1 1321 aaPredicted RBP19.44■□□□□ 0.7
BRPF3-203ENST00000441123 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
BRPF3-203ENST00000441123 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
BRPF3-203ENST00000441123 HRCP23327 699 aa19.36■□□□□ 0.69
BRPF3-203ENST00000441123 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
BRPF3-203ENST00000441123 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
BRPF3-203ENST00000441123 MYT1Q01538 1121 aa19.07■□□□□ 0.64
BRPF3-203ENST00000441123 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
BRPF3-203ENST00000441123 NEFLP07196 543 aa18.98■□□□□ 0.63
BRPF3-203ENST00000441123 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
BRPF3-203ENST00000441123 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
BRPF3-203ENST00000441123 ZCCHC6Q5VYS8 1495 aaKnown RBP18.91■□□□□ 0.62
BRPF3-203ENST00000441123 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
BRPF3-203ENST00000441123 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
BRPF3-203ENST00000441123 ABCC9O60706 1549 aa18.79■□□□□ 0.6
BRPF3-203ENST00000441123 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
BRPF3-203ENST00000441123 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
BRPF3-203ENST00000441123 ITGAEP38570 1179 aa18.6■□□□□ 0.57
BRPF3-203ENST00000441123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
BRPF3-203ENST00000441123 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.57
BRPF3-203ENST00000441123 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
BRPF3-203ENST00000441123 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
BRPF3-203ENST00000441123 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
BRPF3-203ENST00000441123 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
BRPF3-203ENST00000441123 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
BRPF3-203ENST00000441123 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
BRPF3-203ENST00000441123 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
BRPF3-203ENST00000441123 DAXXQ9UER7 740 aaPredicted RBP18.22■□□□□ 0.51
BRPF3-203ENST00000441123 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
BRPF3-203ENST00000441123 ANP32CO43423 234 aa18.15■□□□□ 0.5
BRPF3-203ENST00000441123 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
BRPF3-203ENST00000441123 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
BRPF3-203ENST00000441123 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
BRPF3-203ENST00000441123 NACADO15069 1562 aa18.12■□□□□ 0.49
BRPF3-203ENST00000441123 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
BRPF3-203ENST00000441123 ACIN1Q9UKV3 1341 aaKnown RBP18.11■□□□□ 0.49
BRPF3-203ENST00000441123 EEA1Q15075 1411 aa18.09■□□□□ 0.49
BRPF3-203ENST00000441123 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
BRPF3-203ENST00000441123 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
BRPF3-203ENST00000441123 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
BRPF3-203ENST00000441123 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
BRPF3-203ENST00000441123 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
BRPF3-203ENST00000441123 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
BRPF3-203ENST00000441123 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
BRPF3-203ENST00000441123 CLIP1P30622 1438 aa17.87■□□□□ 0.45
BRPF3-203ENST00000441123 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
BRPF3-203ENST00000441123 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
BRPF3-203ENST00000441123 TONSLQ96HA7 1378 aa17.83■□□□□ 0.44
BRPF3-203ENST00000441123 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
BRPF3-203ENST00000441123 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
BRPF3-203ENST00000441123 BCANQ96GW7 911 aa17.8■□□□□ 0.44
BRPF3-203ENST00000441123 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
BRPF3-203ENST00000441123 WRNQ14191 1432 aaPredicted RBP eCLIP17.77■□□□□ 0.44
BRPF3-203ENST00000441123 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.43
BRPF3-203ENST00000441123 FBLN2P98095 1184 aa17.73■□□□□ 0.43
BRPF3-203ENST00000441123 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
BRPF3-203ENST00000441123 KIF27Q86VH2 1401 aa17.63■□□□□ 0.41
BRPF3-203ENST00000441123 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
BRPF3-203ENST00000441123 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
BRPF3-203ENST00000441123 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.41
BRPF3-203ENST00000441123 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
BRPF3-203ENST00000441123 FKBP8Q14318 412 aa17.57■□□□□ 0.4
BRPF3-203ENST00000441123 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
BRPF3-203ENST00000441123 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
BRPF3-203ENST00000441123 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
BRPF3-203ENST00000441123 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.39
BRPF3-203ENST00000441123 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.39
BRPF3-203ENST00000441123 NEFMP07197 916 aa17.51■□□□□ 0.39
BRPF3-203ENST00000441123 MIER1Q8N108 512 aa17.5■□□□□ 0.39
BRPF3-203ENST00000441123 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
BRPF3-203ENST00000441123 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.38
BRPF3-203ENST00000441123 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
BRPF3-203ENST00000441123 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
BRPF3-203ENST00000441123 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
BRPF3-203ENST00000441123 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
BRPF3-203ENST00000441123 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
BRPF3-203ENST00000441123 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
BRPF3-203ENST00000441123 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
BRPF3-203ENST00000441123 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
BRPF3-203ENST00000441123 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
BRPF3-203ENST00000441123 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
BRPF3-203ENST00000441123 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
BRPF3-203ENST00000441123 SOGA1O94964 1423 aa17.36■□□□□ 0.37
BRPF3-203ENST00000441123 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
BRPF3-203ENST00000441123 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
BRPF3-203ENST00000441123 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms